RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ZNF22P17026 224 aaPredicted RBP6.26□□□□□ -1.41
SNCA-206ENST00000420646 PRIMA1Q86XR5 153 aa6.26□□□□□ -1.41
SNCA-206ENST00000420646 SRSF9Q13242 221 aaKnown RBP eCLIP6.26□□□□□ -1.41
SNCA-206ENST00000420646 C9orf118A6NHY6 69 aa6.25□□□□□ -1.41
SNCA-206ENST00000420646 H3BRM9 83 aa6.25□□□□□ -1.41
SNCA-206ENST00000420646 J3QQQ9 107 aa6.25□□□□□ -1.41
SNCA-206ENST00000420646 SMIM13P0DJ93 91 aa6.25□□□□□ -1.41
SNCA-206ENST00000420646 K7EQD1 137 aa6.25□□□□□ -1.41
SNCA-206ENST00000420646 AMELXQ99217 191 aa6.25□□□□□ -1.41
SNCA-206ENST00000420646 TM2D2Q9BX73 214 aa6.25□□□□□ -1.41
SNCA-206ENST00000420646 SPINK8P0C7L1 97 aa6.25□□□□□ -1.41
SNCA-206ENST00000420646 EDA2RQ9HAV5 297 aa6.25□□□□□ -1.41
SNCA-206ENST00000420646 A0A096LPF7 62 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 A0A0J9YY99 117 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 TMEM223A0PJW6 202 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 K7EP34 96 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 COX6A2Q02221 97 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 DEFB135Q30KP9 77 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 PIK3CD-AS1Q5SR53 167 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 DGAT2L7PQ6IED9 249 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 NFE4Q86UQ8 179 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 TENM3Q9P273 2699 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 TRAV13-1A0A0B4J241 112 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 TRGV4A0A0C4DH28 118 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 HERVK_113P61574 105 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 DAZ2Q13117 558 aaKnown RBP6.24□□□□□ -1.41
SNCA-206ENST00000420646 C12orf74Q32Q52 190 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 PTH2Q96A98 100 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 C16orf74Q96GX8 76 aa6.24□□□□□ -1.41
SNCA-206ENST00000420646 TRAV26-1A0A087WT03 109 aa6.23□□□□□ -1.41
SNCA-206ENST00000420646 TRAV4A0A0B4J268 109 aa6.23□□□□□ -1.41
SNCA-206ENST00000420646 IGKV3OR2-268A0A0C4DH90 116 aa6.23□□□□□ -1.41
SNCA-206ENST00000420646 RPL36AP83881 106 aaKnown RBP6.23□□□□□ -1.41
SNCA-206ENST00000420646 SAMD5Q5TGI4 173 aa6.23□□□□□ -1.41
SNCA-206ENST00000420646 MTURNQ8N3F0 131 aa6.23□□□□□ -1.41
SNCA-206ENST00000420646 RPL36ALQ969Q0 106 aaKnown RBP6.23□□□□□ -1.41
SNCA-206ENST00000420646 APOMO95445 188 aa6.23□□□□□ -1.41
SNCA-206ENST00000420646 LGALS3P17931 250 aaKnown RBP6.23□□□□□ -1.41
SNCA-206ENST00000420646 C1QTNF4Q9BXJ3 329 aa6.23□□□□□ -1.41
SNCA-206ENST00000420646 A0A1W2PPM0 123 aa6.23□□□□□ -1.41
SNCA-206ENST00000420646 IGHV3-30-3P0DP02 117 aa6.23□□□□□ -1.41
SNCA-206ENST00000420646 PAPPA-AS1Q5QFB9 102 aa6.23□□□□□ -1.41
SNCA-206ENST00000420646 CDKN2A-AS1Q9UH64 79 aa6.23□□□□□ -1.41
SNCA-206ENST00000420646 PYGO1Q9Y3Y4 419 aa6.23□□□□□ -1.41
SNCA-206ENST00000420646 CMC4P56277 68 aaPredicted RBP6.22□□□□□ -1.41
SNCA-206ENST00000420646 UBE2D3P61077 147 aa6.22□□□□□ -1.41
SNCA-206ENST00000420646 NPC2P61916 151 aa6.22□□□□□ -1.41
SNCA-206ENST00000420646 UBE2D2P62837 147 aa6.22□□□□□ -1.41
SNCA-206ENST00000420646 RPL24P83731 157 aaKnown RBP6.22□□□□□ -1.41
SNCA-206ENST00000420646 C10orf126Q8N4M7 172 aa6.22□□□□□ -1.41
SNCA-206ENST00000420646 LINC01549A6NIU2 74 aa6.22□□□□□ -1.41
SNCA-206ENST00000420646 CRYBA4P53673 196 aa6.22□□□□□ -1.41
SNCA-206ENST00000420646 MRPS36P82909 103 aaKnown RBP6.22□□□□□ -1.41
SNCA-206ENST00000420646 OR5A1Q8NGJ0 315 aa6.22□□□□□ -1.41
SNCA-206ENST00000420646 DNAJC30Q96LL9 226 aa6.22□□□□□ -1.41
SNCA-206ENST00000420646 FAM110AQ9BQ89 295 aa6.22□□□□□ -1.41
SNCA-206ENST00000420646 SPCS1Q9Y6A9 102 aa6.22□□□□□ -1.41
SNCA-206ENST00000420646 FHL2Q14192 279 aa6.21□□□□□ -1.41
SNCA-206ENST00000420646 CITED1Q99966 193 aa6.21□□□□□ -1.41
SNCA-206ENST00000420646 X6R8D5 127 aa6.21□□□□□ -1.41
SNCA-206ENST00000420646 A0A0U1RRA0 63 aa6.21□□□□□ -1.42
SNCA-206ENST00000420646 OXLD1Q5BKU9 147 aa6.21□□□□□ -1.42
SNCA-206ENST00000420646 ZNF625Q96I27 306 aaPredicted RBP6.21□□□□□ -1.42
SNCA-206ENST00000420646 TIMM21Q9BVV7 248 aa6.21□□□□□ -1.42
SNCA-206ENST00000420646 TEX48A0A1B0GUV7 120 aa6.21□□□□□ -1.42
SNCA-206ENST00000420646 IGLL5B9A064 214 aa6.21□□□□□ -1.42
SNCA-206ENST00000420646 SCGB1A1P11684 91 aa6.21□□□□□ -1.42
SNCA-206ENST00000420646 GAGE6Q13070 117 aa6.21□□□□□ -1.42
SNCA-206ENST00000420646 DAND5Q8N907 189 aa6.21□□□□□ -1.42
SNCA-206ENST00000420646 GEMIN7Q9H840 131 aaKnown RBP6.21□□□□□ -1.42
SNCA-206ENST00000420646 LEPROTO15243 131 aa6.2□□□□□ -1.42
SNCA-206ENST00000420646 UBE2D1P51668 147 aa6.2□□□□□ -1.42
SNCA-206ENST00000420646 CFAP161Q6P656 301 aa6.2□□□□□ -1.42
SNCA-206ENST00000420646 OVOL2Q9BRP0 275 aa6.2□□□□□ -1.42
SNCA-206ENST00000420646 SPANXA1Q9NS26 97 aa6.2□□□□□ -1.42
SNCA-206ENST00000420646 A0A1B0GV72 72 aa6.2□□□□□ -1.42
SNCA-206ENST00000420646 ADAMTSL4-AS1Q5T5F5 129 aa6.2□□□□□ -1.42
SNCA-206ENST00000420646 C9orf66Q5T8R8 295 aa6.2□□□□□ -1.42
SNCA-206ENST00000420646 EIF4EBP3O60516 100 aaPredicted RBP6.19□□□□□ -1.42
SNCA-206ENST00000420646 IGHV3-30P01768 117 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 IGHV3-30-5P0DP03 117 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 FABP2P12104 132 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 LINC00242Q5T6M2 205 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 FAM222AQ5U5X8 452 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 PGPEP1Q9NXJ5 209 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 TRBV10-1A0A0K0K1A3 114 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 H7C2G1 150 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 PRSS2P07478 247 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 CKS1BP61024 79 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 DAZ4Q86SG3 579 aaKnown RBP6.19□□□□□ -1.42
SNCA-206ENST00000420646 DAZ3Q9NR90 486 aaKnown RBP6.19□□□□□ -1.42
SNCA-206ENST00000420646 IGLV4-60A0A075B6I1 120 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 H3BMG7 143 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 TAL2Q16559 108 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
SNCA-206ENST00000420646 A0A0J9YXY3 114 aa6.18□□□□□ -1.42
SNCA-206ENST00000420646 VSIG2Q96IQ7 327 aa6.18□□□□□ -1.42
SNCA-206ENST00000420646 NDUFA12Q9UI09 145 aa6.18□□□□□ -1.42
SNCA-206ENST00000420646 IGHV1-58A0A0C4DH39 117 aa6.18□□□□□ -1.42
SNCA-206ENST00000420646 TINCRA0A1B0GVN0 87 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms