RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 LINC01600Q96MT4 127 aa10.35□□□□□ -0.75
PRPF18-203ENST00000417658 TRBV25-1A0A075B6N4 114 aa10.34□□□□□ -0.75
PRPF18-203ENST00000417658 TRAV8-4A0A0B4J246 113 aa10.34□□□□□ -0.75
PRPF18-203ENST00000417658 XKRY2A2RUG3 117 aa10.34□□□□□ -0.75
PRPF18-203ENST00000417658 REG3AQ06141 175 aa10.34□□□□□ -0.75
PRPF18-203ENST00000417658 GAGE6Q13070 117 aa10.34□□□□□ -0.75
PRPF18-203ENST00000417658 OR10AG1Q8NH19 301 aa10.34□□□□□ -0.75
PRPF18-203ENST00000417658 SPACA4Q8TDM5 124 aa10.34□□□□□ -0.75
PRPF18-203ENST00000417658 MRPL18Q9H0U6 180 aaKnown RBP10.34□□□□□ -0.75
PRPF18-203ENST00000417658 AP5S1Q9NUS5 200 aa10.34□□□□□ -0.75
PRPF18-203ENST00000417658 PLAC8Q9NZF1 115 aa10.34□□□□□ -0.75
PRPF18-203ENST00000417658 F5H697 171 aa10.33□□□□□ -0.76
PRPF18-203ENST00000417658 GZMBP10144 247 aa10.33□□□□□ -0.76
PRPF18-203ENST00000417658 NDUFA6P56556 154 aa10.33□□□□□ -0.76
PRPF18-203ENST00000417658 IQCJQ1A5X6 159 aa10.33□□□□□ -0.76
PRPF18-203ENST00000417658 MRPL54Q6P161 138 aaKnown RBP10.33□□□□□ -0.76
PRPF18-203ENST00000417658 SSBP4Q9BWG4 385 aaPredicted RBP10.33□□□□□ -0.76
PRPF18-203ENST00000417658 TNXBP22105 4242 aa10.32□□□□□ -0.76
PRPF18-203ENST00000417658 A0A1B0GW15 77 aa10.32□□□□□ -0.76
PRPF18-203ENST00000417658 SLPIP03973 132 aa10.32□□□□□ -0.76
PRPF18-203ENST00000417658 GATD1Q8NB37 220 aa10.32□□□□□ -0.76
PRPF18-203ENST00000417658 C7orf33Q8WU49 177 aa10.32□□□□□ -0.76
PRPF18-203ENST00000417658 IGLV10-54A0A075B6I4 117 aa10.31□□□□□ -0.76
PRPF18-203ENST00000417658 SNAI2O43623 268 aa10.31□□□□□ -0.76
PRPF18-203ENST00000417658 OR5AL1P0C617 328 aa10.31□□□□□ -0.76
PRPF18-203ENST00000417658 CHTF8P0CG12 524 aa10.31□□□□□ -0.76
PRPF18-203ENST00000417658 HBBP68871 147 aa10.31□□□□□ -0.76
PRPF18-203ENST00000417658 PGLYRP4Q96LB8 373 aa10.31□□□□□ -0.76
PRPF18-203ENST00000417658 IGHV1-24A0A0C4DH33 117 aa10.3□□□□□ -0.76
PRPF18-203ENST00000417658 A0A1B0GUT8 65 aa10.3□□□□□ -0.76
PRPF18-203ENST00000417658 A0A1B0GUV1 79 aa10.3□□□□□ -0.76
PRPF18-203ENST00000417658 S100A8P05109 93 aa10.3□□□□□ -0.76
PRPF18-203ENST00000417658 CTRLP40313 264 aa10.3□□□□□ -0.76
PRPF18-203ENST00000417658 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
PRPF18-203ENST00000417658 APCSP02743 223 aa10.29□□□□□ -0.76
PRPF18-203ENST00000417658 IGLC6P0CF74 106 aa10.29□□□□□ -0.76
PRPF18-203ENST00000417658 RIGQ13278 110 aa10.29□□□□□ -0.76
PRPF18-203ENST00000417658 SPANXN1Q5VSR9 72 aa10.29□□□□□ -0.76
PRPF18-203ENST00000417658 HIST3H2BBQ8N257 126 aa10.29□□□□□ -0.76
PRPF18-203ENST00000417658 C20orf203Q8NBC4 194 aa10.29□□□□□ -0.76
PRPF18-203ENST00000417658 SMIM17P0DL12 118 aa10.28□□□□□ -0.76
PRPF18-203ENST00000417658 CNFNQ9BYD5 112 aa10.28□□□□□ -0.76
PRPF18-203ENST00000417658 IFITM10A6NMD0 228 aa10.27□□□□□ -0.77
PRPF18-203ENST00000417658 BORCS7Q96B45 105 aa10.27□□□□□ -0.77
PRPF18-203ENST00000417658 MUC21A0A0G2JKD1 596 aa10.26□□□□□ -0.77
PRPF18-203ENST00000417658 A0A0J9YXV3 536 aa10.26□□□□□ -0.77
PRPF18-203ENST00000417658 MUC21A0A140T8X8 626 aa10.26□□□□□ -0.77
PRPF18-203ENST00000417658 M0QY20 66 aa10.26□□□□□ -0.77
PRPF18-203ENST00000417658 ESDP10768 282 aa10.26□□□□□ -0.77
PRPF18-203ENST00000417658 CAMPP49913 170 aa10.26□□□□□ -0.77
PRPF18-203ENST00000417658 FER1L6-AS1Q8NA97 138 aa10.26□□□□□ -0.77
PRPF18-203ENST00000417658 IGLV4-60A0A075B6I1 120 aa10.25□□□□□ -0.77
PRPF18-203ENST00000417658 F2Z2F3 143 aa10.25□□□□□ -0.77
PRPF18-203ENST00000417658 H7C1H1 209 aa10.25□□□□□ -0.77
PRPF18-203ENST00000417658 KRTAP10-8P60410 259 aa10.25□□□□□ -0.77
PRPF18-203ENST00000417658 PRR3P79522 188 aaKnown RBP10.25□□□□□ -0.77
PRPF18-203ENST00000417658 COX6A2Q02221 97 aa10.25□□□□□ -0.77
PRPF18-203ENST00000417658 CFAP161Q6P656 301 aa10.25□□□□□ -0.77
PRPF18-203ENST00000417658 LYZL1Q6UWQ5 148 aa10.25□□□□□ -0.77
PRPF18-203ENST00000417658 AP1S3Q96PC3 154 aa10.25□□□□□ -0.77
PRPF18-203ENST00000417658 TMEM243Q9BU79 118 aa10.25□□□□□ -0.77
PRPF18-203ENST00000417658 AKR1D1P51857 326 aa10.24□□□□□ -0.77
PRPF18-203ENST00000417658 SSTP61278 116 aa10.24□□□□□ -0.77
PRPF18-203ENST00000417658 ALKBH7Q9BT30 221 aaPredicted RBP10.23□□□□□ -0.77
PRPF18-203ENST00000417658 S100A2P29034 98 aa10.22□□□□□ -0.77
PRPF18-203ENST00000417658 ODF1Q14990 250 aa10.22□□□□□ -0.77
PRPF18-203ENST00000417658 MAJINQ3KP22 176 aa10.22□□□□□ -0.77
PRPF18-203ENST00000417658 KIAA1644Q3SXP7 199 aa10.22□□□□□ -0.77
PRPF18-203ENST00000417658 REG3GQ6UW15 175 aa10.22□□□□□ -0.77
PRPF18-203ENST00000417658 SPINK6Q6UWN8 80 aa10.22□□□□□ -0.77
PRPF18-203ENST00000417658 LINC00518Q8N0U6 118 aa10.22□□□□□ -0.77
PRPF18-203ENST00000417658 C15orf56Q8N910 161 aa10.22□□□□□ -0.77
PRPF18-203ENST00000417658 PACRGQ96M98 296 aaPredicted RBP10.22□□□□□ -0.77
PRPF18-203ENST00000417658 HIST1H2BLQ99880 126 aa10.22□□□□□ -0.77
PRPF18-203ENST00000417658 SMIM6P0DI80 62 aa10.21□□□□□ -0.77
PRPF18-203ENST00000417658 LINC00310P59036 64 aa10.21□□□□□ -0.77
PRPF18-203ENST00000417658 PRSS3P2Q8NHM4 247 aa10.21□□□□□ -0.77
PRPF18-203ENST00000417658 CACNG7P62955 275 aa10.2□□□□□ -0.78
PRPF18-203ENST00000417658 STPG4Q8N801 248 aa10.2□□□□□ -0.78
PRPF18-203ENST00000417658 C18orf32Q8TCD1 76 aa10.2□□□□□ -0.78
PRPF18-203ENST00000417658 TPPP3Q9BW30 176 aa10.2□□□□□ -0.78
PRPF18-203ENST00000417658 IGKV2-24A0A0C4DH68 120 aa10.19□□□□□ -0.78
PRPF18-203ENST00000417658 GAGE12HA6NDE8 117 aa10.19□□□□□ -0.78
PRPF18-203ENST00000417658 MGPP08493 103 aa10.19□□□□□ -0.78
PRPF18-203ENST00000417658 FAM104BQ5XKR9 115 aa10.19□□□□□ -0.78
PRPF18-203ENST00000417658 SUMO4Q6EEV6 95 aa10.19□□□□□ -0.78
PRPF18-203ENST00000417658 BAGE3Q86Y29 109 aa10.19□□□□□ -0.78
PRPF18-203ENST00000417658 TMEM18Q96B42 140 aa10.19□□□□□ -0.78
PRPF18-203ENST00000417658 TMEM191AQ9H0A3 160 aa10.19□□□□□ -0.78
PRPF18-203ENST00000417658 UBE2L6O14933 153 aa10.18□□□□□ -0.78
PRPF18-203ENST00000417658 SERF1AO75920 110 aa10.18□□□□□ -0.78
PRPF18-203ENST00000417658 FABP4P15090 132 aa10.18□□□□□ -0.78
PRPF18-203ENST00000417658 NTF3P20783 257 aa10.18□□□□□ -0.78
PRPF18-203ENST00000417658 SRSF9Q13242 221 aaKnown RBP eCLIP10.18□□□□□ -0.78
PRPF18-203ENST00000417658 PDZD11Q5EBL8 140 aa10.18□□□□□ -0.78
PRPF18-203ENST00000417658 NIT2Q9NQR4 276 aa10.18□□□□□ -0.78
PRPF18-203ENST00000417658 LINC00474Q9P2X8 69 aa10.18□□□□□ -0.78
PRPF18-203ENST00000417658 NUPR1O60356 82 aa10.17□□□□□ -0.78
PRPF18-203ENST00000417658 GAS8-AS1O95177 125 aa10.17□□□□□ -0.78
PRPF18-203ENST00000417658 TWIST1Q15672 202 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms