RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 Q9HAA7 133 aa5.77□□□□□ -1.49
TRIM48-201ENST00000417545 SPANXA1Q9NS26 97 aa5.77□□□□□ -1.49
TRIM48-201ENST00000417545 PSCAO43653 123 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 HIST1H2BKO60814 126 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 HBDP02042 147 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 S100A6P06703 90 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 HIST1H2BJP06899 126 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 HIST1H2BOP23527 126 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 HIST1H2BBP33778 126 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 NDUFA6P56556 154 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 HIST1H2BDP58876 126 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 HIST1H2BCP62807 126 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 HIST2H2BEQ16778 126 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 PAPPA-AS1Q5QFB9 102 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.76□□□□□ -1.49
TRIM48-201ENST00000417545 HIST1H2BHQ93079 126 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 SCGB3A1Q96QR1 104 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 HIST1H2BNQ99877 126 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 HIST1H2BMQ99879 126 aa5.76□□□□□ -1.49
TRIM48-201ENST00000417545 TRAV8-3A0A0A6YYJ7 113 aa5.75□□□□□ -1.49
TRIM48-201ENST00000417545 A0A1B0GUV1 79 aa5.75□□□□□ -1.49
TRIM48-201ENST00000417545 SERF1AO75920 110 aa5.75□□□□□ -1.49
TRIM48-201ENST00000417545 GHRHP01286 108 aa5.75□□□□□ -1.49
TRIM48-201ENST00000417545 PMCHL1Q16048 86 aa5.75□□□□□ -1.49
TRIM48-201ENST00000417545 MRPL52Q86TS9 123 aaKnown RBP5.75□□□□□ -1.49
TRIM48-201ENST00000417545 NFE4Q86UQ8 179 aa5.75□□□□□ -1.49
TRIM48-201ENST00000417545 LINC00269Q8N2A0 174 aa5.75□□□□□ -1.49
TRIM48-201ENST00000417545 C2orf88Q9BSF0 95 aa5.75□□□□□ -1.49
TRIM48-201ENST00000417545 UBE2D4Q9Y2X8 147 aa5.75□□□□□ -1.49
TRIM48-201ENST00000417545 ALMS1Q8TCU4 4167 aa5.75□□□□□ -1.49
TRIM48-201ENST00000417545 IGLV4-60A0A075B6I1 120 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 IGKV2D-24A0A075B6R9 120 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.74□□□□□ -1.49
TRIM48-201ENST00000417545 REG3AQ06141 175 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 TEX43Q6ZNM6 134 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 ZNF664Q8N3J9 261 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 TOMM6Q96B49 74 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 TMEM141Q96I45 108 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 TIMM21Q9BVV7 248 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 C1orf43Q9BWL3 253 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 TENM2Q9NT68 2774 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 LINC01546A6NGU7 62 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 IFITM10A6NMD0 228 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 IBA57-AS1B1ANH7 110 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 ATP5LO75964 103 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 SS18Q15532 418 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 MIAQ16674 131 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 RNASE13Q5GAN3 156 aaKnown RBP5.74□□□□□ -1.49
TRIM48-201ENST00000417545 C1orf134Q5TEV5 83 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 Q6ZUT4 128 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 ERASQ7Z444 233 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 C6orf223Q8N319 242 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 TM2D2Q9BX73 214 aa5.74□□□□□ -1.49
TRIM48-201ENST00000417545 PLECQ15149 4684 aaKnown RBP5.73□□□□□ -1.49
TRIM48-201ENST00000417545 FAM19A2Q8N3H0 131 aa5.73□□□□□ -1.49
TRIM48-201ENST00000417545 URB1-AS1Q96HZ7 61 aa5.73□□□□□ -1.49
TRIM48-201ENST00000417545 TIMM17AQ99595 171 aa5.73□□□□□ -1.49
TRIM48-201ENST00000417545 VCX2Q9H322 139 aa5.73□□□□□ -1.49
TRIM48-201ENST00000417545 PYGO1Q9Y3Y4 419 aa5.73□□□□□ -1.49
TRIM48-201ENST00000417545 CSDC2Q9Y534 153 aaKnown RBP5.73□□□□□ -1.49
TRIM48-201ENST00000417545 COX11Q9Y6N1 276 aa5.73□□□□□ -1.49
TRIM48-201ENST00000417545 IGLV10-54A0A075B6I4 117 aa5.72□□□□□ -1.49
TRIM48-201ENST00000417545 IGLV4-3A0A075B6K6 122 aa5.72□□□□□ -1.49
TRIM48-201ENST00000417545 TRAV13-1A0A0B4J241 112 aa5.72□□□□□ -1.49
TRIM48-201ENST00000417545 TRAV8-4A0A0B4J246 113 aa5.72□□□□□ -1.49
TRIM48-201ENST00000417545 H0Y8G0 127 aa5.72□□□□□ -1.49
TRIM48-201ENST00000417545 LEPROTL1O95214 131 aa5.72□□□□□ -1.49
TRIM48-201ENST00000417545 NPSP0C0P6 89 aa5.72□□□□□ -1.49
TRIM48-201ENST00000417545 FABP4P15090 132 aa5.72□□□□□ -1.49
TRIM48-201ENST00000417545 S100A2P29034 98 aa5.72□□□□□ -1.49
TRIM48-201ENST00000417545 MRPS36P82909 103 aaKnown RBP5.72□□□□□ -1.49
TRIM48-201ENST00000417545 CDC42SE2Q9NRR3 84 aa5.72□□□□□ -1.49
TRIM48-201ENST00000417545 HSPB8Q9UJY1 196 aa5.72□□□□□ -1.49
TRIM48-201ENST00000417545 PRSS1P07477 247 aa5.71□□□□□ -1.5
TRIM48-201ENST00000417545 PDZD11Q5EBL8 140 aa5.71□□□□□ -1.5
TRIM48-201ENST00000417545 OPRPNQ99935 248 aaPredicted RBP5.71□□□□□ -1.5
TRIM48-201ENST00000417545 KRTAP1-5Q9BYS1 174 aa5.71□□□□□ -1.5
TRIM48-201ENST00000417545 TMA7Q9Y2S6 64 aaKnown RBP5.71□□□□□ -1.5
TRIM48-201ENST00000417545 CCL25O15444 150 aa5.7□□□□□ -1.5
TRIM48-201ENST00000417545 XCL1P47992 114 aa5.7□□□□□ -1.5
TRIM48-201ENST00000417545 ENHOQ6UWT2 76 aa5.7□□□□□ -1.5
TRIM48-201ENST00000417545 Q6ZR54 194 aa5.7□□□□□ -1.5
TRIM48-201ENST00000417545 IFI27L1Q96BM0 104 aa5.7□□□□□ -1.5
TRIM48-201ENST00000417545 LYSTQ99698 3801 aa5.7□□□□□ -1.5
TRIM48-201ENST00000417545 PRR34Q9NV39 138 aa5.7□□□□□ -1.5
TRIM48-201ENST00000417545 LINC00959A0A1B0GUT2 108 aa5.69□□□□□ -1.5
TRIM48-201ENST00000417545 LOC105371267A0A1B0GV96 52 aa5.69□□□□□ -1.5
TRIM48-201ENST00000417545 GAGE12HA6NDE8 117 aa5.69□□□□□ -1.5
TRIM48-201ENST00000417545 IGIPA6NJ69 53 aa5.69□□□□□ -1.5
TRIM48-201ENST00000417545 MALP21145 153 aa5.69□□□□□ -1.5
TRIM48-201ENST00000417545 SEC11AP67812 179 aa5.69□□□□□ -1.5
TRIM48-201ENST00000417545 PMVKQ15126 192 aa5.69□□□□□ -1.5
TRIM48-201ENST00000417545 BAALCQ8WXS3 180 aa5.69□□□□□ -1.5
TRIM48-201ENST00000417545 CHCHD10Q8WYQ3 142 aaPredicted RBP5.69□□□□□ -1.5
TRIM48-201ENST00000417545 MAP1LC3CQ9BXW4 147 aa5.69□□□□□ -1.5
TRIM48-201ENST00000417545 GEMIN7Q9H840 131 aaKnown RBP5.69□□□□□ -1.5
TRIM48-201ENST00000417545 A0A096LNJ9 63 aa5.68□□□□□ -1.5
TRIM48-201ENST00000417545 NUPR1O60356 82 aa5.68□□□□□ -1.5
TRIM48-201ENST00000417545 LINC00310P59036 64 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms