RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 COX6A2Q02221 97 aa10.44□□□□□ -0.74
HDAC9-208ENST00000417496 Q8N2B8 174 aa10.44□□□□□ -0.74
HDAC9-208ENST00000417496 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.44□□□□□ -0.74
HDAC9-208ENST00000417496 INSP01308 110 aa10.44□□□□□ -0.74
HDAC9-208ENST00000417496 ODF3L2Q3SX64 289 aa10.44□□□□□ -0.74
HDAC9-208ENST00000417496 SPANXA1Q9NS26 97 aa10.44□□□□□ -0.74
HDAC9-208ENST00000417496 TRGV1A0A0A0MS02 117 aa10.43□□□□□ -0.74
HDAC9-208ENST00000417496 A0A0U1RRA0 63 aa10.43□□□□□ -0.74
HDAC9-208ENST00000417496 ZNF625Q96I27 306 aaPredicted RBP10.43□□□□□ -0.74
HDAC9-208ENST00000417496 LINC00694P0DN24 101 aa10.43□□□□□ -0.74
HDAC9-208ENST00000417496 DEFB113Q30KQ7 82 aa10.43□□□□□ -0.74
HDAC9-208ENST00000417496 DGAT2L7PQ6IED9 249 aa10.42□□□□□ -0.74
HDAC9-208ENST00000417496 CRYBA4P53673 196 aa10.42□□□□□ -0.74
HDAC9-208ENST00000417496 BEAN1Q3B7T3 259 aa10.42□□□□□ -0.74
HDAC9-208ENST00000417496 C1orf158Q8N1D5 194 aa10.42□□□□□ -0.74
HDAC9-208ENST00000417496 RS1O15537 224 aa10.41□□□□□ -0.74
HDAC9-208ENST00000417496 NTN5Q8WTR8 489 aaPredicted RBP10.41□□□□□ -0.74
HDAC9-208ENST00000417496 TMEM101Q96IK0 257 aa10.41□□□□□ -0.74
HDAC9-208ENST00000417496 TEX49A0A1B0GTD5 131 aa10.4□□□□□ -0.74
HDAC9-208ENST00000417496 MIAQ16674 131 aa10.4□□□□□ -0.74
HDAC9-208ENST00000417496 LINC01620Q4KN68 170 aa10.4□□□□□ -0.74
HDAC9-208ENST00000417496 Q6ZTI0 123 aa10.4□□□□□ -0.74
HDAC9-208ENST00000417496 STHQ8IWL8 128 aa10.4□□□□□ -0.74
HDAC9-208ENST00000417496 PIK3CD-AS1Q5SR53 167 aa10.4□□□□□ -0.75
HDAC9-208ENST00000417496 CLEC2BQ92478 149 aa10.4□□□□□ -0.75
HDAC9-208ENST00000417496 TRAV13-1A0A0B4J241 112 aa10.39□□□□□ -0.75
HDAC9-208ENST00000417496 ATXN8Q156A1 80 aa10.39□□□□□ -0.75
HDAC9-208ENST00000417496 ZFAND6Q6FIF0 208 aa10.39□□□□□ -0.75
HDAC9-208ENST00000417496 CKS1BP61024 79 aa10.39□□□□□ -0.75
HDAC9-208ENST00000417496 SPANXDQ9BXN6 97 aa10.39□□□□□ -0.75
HDAC9-208ENST00000417496 SPANXCQ9NY87 97 aa10.39□□□□□ -0.75
HDAC9-208ENST00000417496 ICOSQ9Y6W8 199 aa10.39□□□□□ -0.75
HDAC9-208ENST00000417496 TRBV30A0A0K0K1B3 111 aa10.38□□□□□ -0.75
HDAC9-208ENST00000417496 DNAJC30Q96LL9 226 aa10.38□□□□□ -0.75
HDAC9-208ENST00000417496 LINC00242Q5T6M2 205 aa10.38□□□□□ -0.75
HDAC9-208ENST00000417496 NTM-AS1Q6ZSK4 140 aa10.38□□□□□ -0.75
HDAC9-208ENST00000417496 KRTAP1-3Q8IUG1 177 aa10.37□□□□□ -0.75
HDAC9-208ENST00000417496 WFDC10AQ9H1F0 79 aa10.37□□□□□ -0.75
HDAC9-208ENST00000417496 PLA2G2AP14555 144 aa10.37□□□□□ -0.75
HDAC9-208ENST00000417496 ZNF843Q8N446 348 aa10.37□□□□□ -0.75
HDAC9-208ENST00000417496 Q9H8V8 135 aa10.37□□□□□ -0.75
HDAC9-208ENST00000417496 GAGE12JA6NER3 117 aa10.36□□□□□ -0.75
HDAC9-208ENST00000417496 GAGE4Q13068 117 aa10.36□□□□□ -0.75
HDAC9-208ENST00000417496 GAGE5Q13069 117 aa10.36□□□□□ -0.75
HDAC9-208ENST00000417496 WFDC11Q8NEX6 87 aa10.36□□□□□ -0.75
HDAC9-208ENST00000417496 A0A1B0GV72 72 aa10.36□□□□□ -0.75
HDAC9-208ENST00000417496 CCL24O00175 119 aa10.36□□□□□ -0.75
HDAC9-208ENST00000417496 CIDEAO60543 219 aa10.36□□□□□ -0.75
HDAC9-208ENST00000417496 NOP10Q9NPE3 64 aaKnown RBP10.36□□□□□ -0.75
HDAC9-208ENST00000417496 ESM1Q9NQ30 184 aa10.36□□□□□ -0.75
HDAC9-208ENST00000417496 DNAJC9-AS1A6NH13 148 aa10.35□□□□□ -0.75
HDAC9-208ENST00000417496 RPL13AP40429 203 aaKnown RBP10.35□□□□□ -0.75
HDAC9-208ENST00000417496 HIST2H2BCQ6DN03 193 aa10.35□□□□□ -0.75
HDAC9-208ENST00000417496 H7C423 109 aa10.35□□□□□ -0.75
HDAC9-208ENST00000417496 TIRAPP58753 221 aa10.34□□□□□ -0.75
HDAC9-208ENST00000417496 CITED2Q99967 270 aaPredicted RBP10.34□□□□□ -0.75
HDAC9-208ENST00000417496 IGLV5-45A0A087WSX0 123 aa10.34□□□□□ -0.75
HDAC9-208ENST00000417496 FN1P02751 2386 aaKnown RBP10.34□□□□□ -0.75
HDAC9-208ENST00000417496 TRBV10-2A0A0K0K1G8 114 aa10.33□□□□□ -0.76
HDAC9-208ENST00000417496 NDUFA1O15239 70 aa10.33□□□□□ -0.76
HDAC9-208ENST00000417496 C2orf82Q6UX34 121 aa10.33□□□□□ -0.76
HDAC9-208ENST00000417496 LOC100131303A0A0U1RQF7 123 aa10.33□□□□□ -0.76
HDAC9-208ENST00000417496 RPL36AP83881 106 aaKnown RBP10.33□□□□□ -0.76
HDAC9-208ENST00000417496 RPL36ALQ969Q0 106 aaKnown RBP10.33□□□□□ -0.76
HDAC9-208ENST00000417496 K7EQD1 137 aa10.32□□□□□ -0.76
HDAC9-208ENST00000417496 IL17DQ8TAD2 202 aa10.32□□□□□ -0.76
HDAC9-208ENST00000417496 TENM4Q6N022 2769 aa10.32□□□□□ -0.76
HDAC9-208ENST00000417496 NBEAL2Q6ZNJ1 2754 aa10.32□□□□□ -0.76
HDAC9-208ENST00000417496 SMIM1B2RUZ4 78 aa10.32□□□□□ -0.76
HDAC9-208ENST00000417496 CRLF1O75462 422 aa10.32□□□□□ -0.76
HDAC9-208ENST00000417496 GIG44P09565 113 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-208ENST00000417496 LINC00308Q8TCZ7 52 aa10.32□□□□□ -0.76
HDAC9-208ENST00000417496 COX6CP09669 75 aa10.31□□□□□ -0.76
HDAC9-208ENST00000417496 RPL35AP18077 110 aaKnown RBP10.31□□□□□ -0.76
HDAC9-208ENST00000417496 HERVK_113P63121 156 aa10.31□□□□□ -0.76
HDAC9-208ENST00000417496 SOSTDC1Q6X4U4 206 aa10.31□□□□□ -0.76
HDAC9-208ENST00000417496 IGLV5-39A0A0G2JS06 123 aa10.31□□□□□ -0.76
HDAC9-208ENST00000417496 GAGE7O76087 117 aa10.31□□□□□ -0.76
HDAC9-208ENST00000417496 GAGE12FP0CL80 117 aa10.31□□□□□ -0.76
HDAC9-208ENST00000417496 GAGE12GP0CL81 117 aa10.31□□□□□ -0.76
HDAC9-208ENST00000417496 GAGE12IP0CL82 117 aa10.31□□□□□ -0.76
HDAC9-208ENST00000417496 YAE1D1Q9NRH1 226 aa10.31□□□□□ -0.76
HDAC9-208ENST00000417496 ITPR2Q14571 2701 aa10.31□□□□□ -0.76
HDAC9-208ENST00000417496 TMEM262E9PQX1 116 aa10.3□□□□□ -0.76
HDAC9-208ENST00000417496 M0QXV9 152 aa10.3□□□□□ -0.76
HDAC9-208ENST00000417496 IGKV3OR2-268A0A0C4DH90 116 aa10.3□□□□□ -0.76
HDAC9-208ENST00000417496 CIRBPQ14011 172 aaKnown RBP10.3□□□□□ -0.76
HDAC9-208ENST00000417496 CDC42SE2Q9NRR3 84 aa10.3□□□□□ -0.76
HDAC9-208ENST00000417496 TIMM17BO60830 172 aa10.29□□□□□ -0.76
HDAC9-208ENST00000417496 PRIMA1Q86XR5 153 aa10.29□□□□□ -0.76
HDAC9-208ENST00000417496 TRGV2A0A075B6R0 118 aa10.29□□□□□ -0.76
HDAC9-208ENST00000417496 TRAV4A0A0B4J268 109 aa10.29□□□□□ -0.76
HDAC9-208ENST00000417496 LRRC75A-AS1Q8N1F1 130 aa10.29□□□□□ -0.76
HDAC9-208ENST00000417496 UBE2WQ96B02 151 aa10.29□□□□□ -0.76
HDAC9-208ENST00000417496 LST1O00453 97 aa10.28□□□□□ -0.76
HDAC9-208ENST00000417496 IFITM1P13164 125 aa10.28□□□□□ -0.76
HDAC9-208ENST00000417496 DAZ2Q13117 558 aaKnown RBP10.28□□□□□ -0.76
HDAC9-208ENST00000417496 MEIG1Q5JSS6 88 aa10.28□□□□□ -0.76
HDAC9-208ENST00000417496 DAZ4Q86SG3 579 aaKnown RBP10.28□□□□□ -0.76
HDAC9-208ENST00000417496 CLUHP3Q96NS8 147 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms