RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 LECT2O14960 151 aa11.79□□□□□ -0.52
VCP-202ENST00000417448 WFDC2Q14508 124 aa11.79□□□□□ -0.52
VCP-202ENST00000417448 PRELID3AQ96N28 172 aa11.79□□□□□ -0.52
VCP-202ENST00000417448 LOC389332A0A1B0GUA5 103 aa11.78□□□□□ -0.52
VCP-202ENST00000417448 S100PP25815 95 aa11.78□□□□□ -0.52
VCP-202ENST00000417448 ELOBQ15370 118 aa11.78□□□□□ -0.52
VCP-202ENST00000417448 RNASEKQ6P5S7 137 aaKnown RBP11.78□□□□□ -0.52
VCP-202ENST00000417448 ORMDL3Q8N138 153 aa11.78□□□□□ -0.52
VCP-202ENST00000417448 TRBV24-1A0A075B6N3 115 aa11.77□□□□□ -0.53
VCP-202ENST00000417448 IGKV3OR2-268A0A0C4DH90 116 aa11.77□□□□□ -0.53
VCP-202ENST00000417448 PPP1R17O96001 155 aa11.77□□□□□ -0.53
VCP-202ENST00000417448 ESDP10768 282 aa11.77□□□□□ -0.53
VCP-202ENST00000417448 FCER1GP30273 86 aa11.77□□□□□ -0.53
VCP-202ENST00000417448 NDUFA5Q16718 116 aa11.77□□□□□ -0.53
VCP-202ENST00000417448 SCXQ7RTU7 201 aa11.77□□□□□ -0.53
VCP-202ENST00000417448 BAALCQ8WXS3 180 aa11.77□□□□□ -0.53
VCP-202ENST00000417448 IGLV10-54A0A075B6I4 117 aa11.76□□□□□ -0.53
VCP-202ENST00000417448 TGIF2-C20orf24A0A0A6YYL0 155 aa11.76□□□□□ -0.53
VCP-202ENST00000417448 TCAPO15273 167 aa11.76□□□□□ -0.53
VCP-202ENST00000417448 CRPP02741 224 aa11.76□□□□□ -0.53
VCP-202ENST00000417448 FGF6P10767 208 aa11.76□□□□□ -0.53
VCP-202ENST00000417448 PKIAP61925 76 aa11.76□□□□□ -0.53
VCP-202ENST00000417448 AMMECR1LQ6DCA0 310 aa11.76□□□□□ -0.53
VCP-202ENST00000417448 SVBPQ8N300 66 aa11.76□□□□□ -0.53
VCP-202ENST00000417448 C20orf78Q9BR46 151 aa11.76□□□□□ -0.53
VCP-202ENST00000417448 SMIM2Q9BVW6 85 aa11.76□□□□□ -0.53
VCP-202ENST00000417448 SNAPINO95295 136 aa11.75□□□□□ -0.53
VCP-202ENST00000417448 PPBPP02775 128 aa11.75□□□□□ -0.53
VCP-202ENST00000417448 REG3AQ06141 175 aa11.75□□□□□ -0.53
VCP-202ENST00000417448 TM2D2Q9BX73 214 aa11.75□□□□□ -0.53
VCP-202ENST00000417448 TRAV9-1A0A075B6T8 112 aa11.74□□□□□ -0.53
VCP-202ENST00000417448 A0A1B0GUV1 79 aa11.74□□□□□ -0.53
VCP-202ENST00000417448 Q0VG73 95 aa11.73□□□□□ -0.53
VCP-202ENST00000417448 KIR2DL4Q99706 377 aa11.73□□□□□ -0.53
VCP-202ENST00000417448 C1orf43Q9BWL3 253 aa11.73□□□□□ -0.53
VCP-202ENST00000417448 PRR34Q9NV39 138 aa11.73□□□□□ -0.53
VCP-202ENST00000417448 RPL39P62891 51 aaKnown RBP11.72□□□□□ -0.53
VCP-202ENST00000417448 RMI2Q96E14 147 aa11.72□□□□□ -0.53
VCP-202ENST00000417448 PHOX2AO14813 284 aa11.71□□□□□ -0.53
VCP-202ENST00000417448 HLA-DQA1P01909 254 aa11.71□□□□□ -0.53
VCP-202ENST00000417448 RPL32P62910 135 aaKnown RBP11.71□□□□□ -0.53
VCP-202ENST00000417448 LINC01620Q4KN68 170 aa11.71□□□□□ -0.53
VCP-202ENST00000417448 RNASE13Q5GAN3 156 aaKnown RBP11.71□□□□□ -0.53
VCP-202ENST00000417448 MIAQ16674 131 aa11.7□□□□□ -0.54
VCP-202ENST00000417448 KRTAP26-1Q6PEX3 210 aa11.7□□□□□ -0.54
VCP-202ENST00000417448 GNB1LQ9BYB4 327 aa11.7□□□□□ -0.54
VCP-202ENST00000417448 MRPL18Q9H0U6 180 aaKnown RBP11.7□□□□□ -0.54
VCP-202ENST00000417448 MAP1LC3AQ9H492 121 aa11.7□□□□□ -0.54
VCP-202ENST00000417448 TNXBP22105 4242 aa11.7□□□□□ -0.54
VCP-202ENST00000417448 H7C423 109 aa11.69□□□□□ -0.54
VCP-202ENST00000417448 FABP9Q0Z7S8 132 aa11.69□□□□□ -0.54
VCP-202ENST00000417448 CBLN2Q8IUK8 224 aa11.69□□□□□ -0.54
VCP-202ENST00000417448 OR5A1Q8NGJ0 315 aa11.69□□□□□ -0.54
VCP-202ENST00000417448 TMEM101Q96IK0 257 aa11.69□□□□□ -0.54
VCP-202ENST00000417448 HNRNPA3P51991 378 aaKnown RBP11.68□□□□□ -0.54
VCP-202ENST00000417448 OPRPNQ99935 248 aaPredicted RBP11.68□□□□□ -0.54
VCP-202ENST00000417448 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.67□□□□□ -0.54
VCP-202ENST00000417448 MT1HL1P0DM35 61 aa11.67□□□□□ -0.54
VCP-202ENST00000417448 IFI27P40305 119 aaPredicted RBP11.67□□□□□ -0.54
VCP-202ENST00000417448 UBE2D4Q9Y2X8 147 aa11.67□□□□□ -0.54
VCP-202ENST00000417448 PRSS47A8MTI9 375 aa11.66□□□□□ -0.54
VCP-202ENST00000417448 RAB5AP20339 215 aa11.66□□□□□ -0.54
VCP-202ENST00000417448 DGAT2L7PQ6IED9 249 aa11.66□□□□□ -0.54
VCP-202ENST00000417448 MRPL52Q86TS9 123 aaKnown RBP11.66□□□□□ -0.54
VCP-202ENST00000417448 Q8N8P6 123 aa11.66□□□□□ -0.54
VCP-202ENST00000417448 YPEL4Q96NS1 127 aa11.66□□□□□ -0.54
VCP-202ENST00000417448 ALKBH7Q9BT30 221 aaPredicted RBP11.66□□□□□ -0.54
VCP-202ENST00000417448 CDC42SE2Q9NRR3 84 aa11.66□□□□□ -0.54
VCP-202ENST00000417448 LAMTOR2Q9Y2Q5 125 aa11.66□□□□□ -0.54
VCP-202ENST00000417448 COX11Q9Y6N1 276 aa11.66□□□□□ -0.54
VCP-202ENST00000417448 GAGE12HA6NDE8 117 aa11.65□□□□□ -0.54
VCP-202ENST00000417448 ZNF25P17030 456 aaPredicted RBP11.65□□□□□ -0.54
VCP-202ENST00000417448 Q6ZUT4 128 aa11.65□□□□□ -0.54
VCP-202ENST00000417448 ZNF664Q8N3J9 261 aa11.65□□□□□ -0.54
VCP-202ENST00000417448 CIRBP-AS1Q8TBR5 109 aa11.65□□□□□ -0.54
VCP-202ENST00000417448 CHAC1Q9BUX1 264 aa11.65□□□□□ -0.54
VCP-202ENST00000417448 TRAPPC1Q9Y5R8 145 aa11.65□□□□□ -0.54
VCP-202ENST00000417448 USP17L23D6RBM5 183 aa11.64□□□□□ -0.55
VCP-202ENST00000417448 FAM104AQ969W3 186 aa11.64□□□□□ -0.55
VCP-202ENST00000417448 COX19Q49B96 90 aa11.63□□□□□ -0.55
VCP-202ENST00000417448 CHCHD10Q8WYQ3 142 aaPredicted RBP11.63□□□□□ -0.55
VCP-202ENST00000417448 TRAV8-4A0A0B4J246 113 aa11.62□□□□□ -0.55
VCP-202ENST00000417448 LINC00959A0A1B0GUT2 108 aa11.62□□□□□ -0.55
VCP-202ENST00000417448 MT-ND6P03923 174 aa11.61□□□□□ -0.55
VCP-202ENST00000417448 XCL1P47992 114 aa11.61□□□□□ -0.55
VCP-202ENST00000417448 TMEM18Q96B42 140 aa11.61□□□□□ -0.55
VCP-202ENST00000417448 SMCO4Q9NRQ5 59 aa11.61□□□□□ -0.55
VCP-202ENST00000417448 CCL25O15444 150 aa11.6□□□□□ -0.55
VCP-202ENST00000417448 ZC2HC1BQ5TFG8 222 aa11.6□□□□□ -0.55
VCP-202ENST00000417448 PRSS3P2Q8NHM4 247 aa11.6□□□□□ -0.55
VCP-202ENST00000417448 TIMM21Q9BVV7 248 aa11.6□□□□□ -0.55
VCP-202ENST00000417448 TRAV13-1A0A0B4J241 112 aa11.59□□□□□ -0.55
VCP-202ENST00000417448 SCO1O75880 301 aa11.59□□□□□ -0.55
VCP-202ENST00000417448 PRSS1P07477 247 aa11.59□□□□□ -0.55
VCP-202ENST00000417448 NXT2Q9NPJ8 142 aaKnown RBP11.59□□□□□ -0.55
VCP-202ENST00000417448 C2orf66Q6UXQ4 117 aa11.58□□□□□ -0.56
VCP-202ENST00000417448 CSDC2Q9Y534 153 aaKnown RBP11.58□□□□□ -0.56
VCP-202ENST00000417448 FOXI1Q12951 378 aa11.57□□□□□ -0.56
VCP-202ENST00000417448 SS18Q15532 418 aa11.57□□□□□ -0.56
VCP-202ENST00000417448 ORMDL2Q53FV1 153 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms