RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 CHAC1Q9BUX1 264 aa13.52□□□□□ -0.25
RAB3IP-205ENST00000417413 RNASE13Q5GAN3 156 aaKnown RBP13.51□□□□□ -0.25
RAB3IP-205ENST00000417413 HIGD1BQ9P298 99 aa13.51□□□□□ -0.25
RAB3IP-205ENST00000417413 TMEM170BQ5T4T1 132 aa13.5□□□□□ -0.25
RAB3IP-205ENST00000417413 TRBV25-1A0A075B6N4 114 aa13.5□□□□□ -0.25
RAB3IP-205ENST00000417413 ZNF22P17026 224 aaPredicted RBP13.5□□□□□ -0.25
RAB3IP-205ENST00000417413 HERVK_113P61574 105 aa13.49□□□□□ -0.25
RAB3IP-205ENST00000417413 CELA1Q9UNI1 258 aa13.49□□□□□ -0.25
RAB3IP-205ENST00000417413 CSDC2Q9Y534 153 aaKnown RBP13.49□□□□□ -0.25
RAB3IP-205ENST00000417413 TMEM223A0PJW6 202 aa13.48□□□□□ -0.25
RAB3IP-205ENST00000417413 TMEM243Q9BU79 118 aa13.48□□□□□ -0.25
RAB3IP-205ENST00000417413 PRO0255Q9UI72 69 aa13.48□□□□□ -0.25
RAB3IP-205ENST00000417413 MYMXA0A1B0GTQ4 84 aa13.47□□□□□ -0.25
RAB3IP-205ENST00000417413 HSD52Q0P140 79 aa13.47□□□□□ -0.25
RAB3IP-205ENST00000417413 KPRPQ5T749 579 aaPredicted RBP13.47□□□□□ -0.25
RAB3IP-205ENST00000417413 DAD1P61803 113 aa13.46□□□□□ -0.25
RAB3IP-205ENST00000417413 DGAT2L7PQ6IED9 249 aa13.46□□□□□ -0.25
RAB3IP-205ENST00000417413 GYPEP15421 78 aa13.46□□□□□ -0.26
RAB3IP-205ENST00000417413 UBE2D1P51668 147 aa13.46□□□□□ -0.26
RAB3IP-205ENST00000417413 TINCRA0A1B0GVN0 87 aa13.45□□□□□ -0.26
RAB3IP-205ENST00000417413 H7C423 109 aa13.45□□□□□ -0.26
RAB3IP-205ENST00000417413 SPART-AS1P0CW21 52 aa13.45□□□□□ -0.26
RAB3IP-205ENST00000417413 TRBV6-8A0A0A6YYG3 113 aa13.44□□□□□ -0.26
RAB3IP-205ENST00000417413 NBEAL2Q6ZNJ1 2754 aa13.44□□□□□ -0.26
RAB3IP-205ENST00000417413 TSPEAR-AS2P59090 65 aa13.43□□□□□ -0.26
RAB3IP-205ENST00000417413 SMAGPQ0VAQ4 97 aa13.43□□□□□ -0.26
RAB3IP-205ENST00000417413 ATP6V0E2Q8NHE4 81 aa13.43□□□□□ -0.26
RAB3IP-205ENST00000417413 VSIG2Q96IQ7 327 aa13.43□□□□□ -0.26
RAB3IP-205ENST00000417413 CDC42SE2Q9NRR3 84 aa13.43□□□□□ -0.26
RAB3IP-205ENST00000417413 LEPROTO15243 131 aa13.42□□□□□ -0.26
RAB3IP-205ENST00000417413 PAX4O43316 350 aa13.42□□□□□ -0.26
RAB3IP-205ENST00000417413 RETNQ9HD89 108 aa13.42□□□□□ -0.26
RAB3IP-205ENST00000417413 ZNF815PA8K554 130 aa13.42□□□□□ -0.26
RAB3IP-205ENST00000417413 UBE2L6O14933 153 aa13.42□□□□□ -0.26
RAB3IP-205ENST00000417413 ATP5G1P05496 136 aa13.42□□□□□ -0.26
RAB3IP-205ENST00000417413 OR5A1Q8NGJ0 315 aa13.42□□□□□ -0.26
RAB3IP-205ENST00000417413 ORAOV1Q8WV07 137 aa13.42□□□□□ -0.26
RAB3IP-205ENST00000417413 ZNF25P17030 456 aaPredicted RBP13.41□□□□□ -0.26
RAB3IP-205ENST00000417413 TIRAPP58753 221 aa13.41□□□□□ -0.26
RAB3IP-205ENST00000417413 FAM19A3Q7Z5A8 133 aa13.41□□□□□ -0.26
RAB3IP-205ENST00000417413 J3QQQ9 107 aa13.4□□□□□ -0.26
RAB3IP-205ENST00000417413 SEC11AP67812 179 aa13.4□□□□□ -0.26
RAB3IP-205ENST00000417413 AMMECR1LQ6DCA0 310 aa13.4□□□□□ -0.26
RAB3IP-205ENST00000417413 CMYA5Q8N3K9 4069 aa13.4□□□□□ -0.26
RAB3IP-205ENST00000417413 PLEKHB2Q96CS7 222 aa13.39□□□□□ -0.27
RAB3IP-205ENST00000417413 IGLV5-45A0A087WSX0 123 aa13.39□□□□□ -0.27
RAB3IP-205ENST00000417413 GAGE6Q13070 117 aa13.39□□□□□ -0.27
RAB3IP-205ENST00000417413 TAL2Q16559 108 aa13.39□□□□□ -0.27
RAB3IP-205ENST00000417413 TMEM101Q96IK0 257 aa13.39□□□□□ -0.27
RAB3IP-205ENST00000417413 A0A0J9YY99 117 aa13.38□□□□□ -0.27
RAB3IP-205ENST00000417413 TEX48A0A1B0GUV7 120 aa13.38□□□□□ -0.27
RAB3IP-205ENST00000417413 LINC00242Q5T6M2 205 aa13.38□□□□□ -0.27
RAB3IP-205ENST00000417413 IGHV3-64A0A075B6Q5 118 aa13.37□□□□□ -0.27
RAB3IP-205ENST00000417413 TAX1BP3O14907 124 aa13.37□□□□□ -0.27
RAB3IP-205ENST00000417413 LGALS3P17931 250 aaKnown RBP13.37□□□□□ -0.27
RAB3IP-205ENST00000417413 COX6A2Q02221 97 aa13.37□□□□□ -0.27
RAB3IP-205ENST00000417413 CHCHD5Q9BSY4 110 aa13.37□□□□□ -0.27
RAB3IP-205ENST00000417413 GEMIN7Q9H840 131 aaKnown RBP13.37□□□□□ -0.27
RAB3IP-205ENST00000417413 MGAM2Q2M2H8 2515 aa13.36□□□□□ -0.27
RAB3IP-205ENST00000417413 Q6ZVH6 145 aa13.36□□□□□ -0.27
RAB3IP-205ENST00000417413 LINC00469Q8N7U9 141 aa13.36□□□□□ -0.27
RAB3IP-205ENST00000417413 TM2D2Q9BX73 214 aa13.36□□□□□ -0.27
RAB3IP-205ENST00000417413 PKD1L1Q8TDX9 2849 aa13.36□□□□□ -0.27
RAB3IP-205ENST00000417413 TRAV26-1A0A087WT03 109 aa13.35□□□□□ -0.27
RAB3IP-205ENST00000417413 F5H768 121 aa13.35□□□□□ -0.27
RAB3IP-205ENST00000417413 IGHV3-30-3P0DP02 117 aa13.35□□□□□ -0.27
RAB3IP-205ENST00000417413 C12orf74Q32Q52 190 aa13.35□□□□□ -0.27
RAB3IP-205ENST00000417413 DEFB121Q5J5C9 76 aa13.35□□□□□ -0.27
RAB3IP-205ENST00000417413 CEND1Q8N111 149 aa13.35□□□□□ -0.27
RAB3IP-205ENST00000417413 CDKN2A-AS1Q9UH64 79 aa13.35□□□□□ -0.27
RAB3IP-205ENST00000417413 IGLV4-60A0A075B6I1 120 aa13.35□□□□□ -0.27
RAB3IP-205ENST00000417413 TRAV8-3A0A0A6YYJ7 113 aa13.35□□□□□ -0.27
RAB3IP-205ENST00000417413 IGHV1-58A0A0C4DH39 117 aa13.35□□□□□ -0.27
RAB3IP-205ENST00000417413 GCSHP23434 173 aa13.35□□□□□ -0.27
RAB3IP-205ENST00000417413 FXYD2P54710 66 aa13.35□□□□□ -0.27
RAB3IP-205ENST00000417413 A0A096LPF7 62 aa13.34□□□□□ -0.27
RAB3IP-205ENST00000417413 TRAV13-1A0A0B4J241 112 aa13.34□□□□□ -0.27
RAB3IP-205ENST00000417413 K7EIL1 84 aa13.34□□□□□ -0.27
RAB3IP-205ENST00000417413 HERVK_113P63121 156 aa13.34□□□□□ -0.27
RAB3IP-205ENST00000417413 SCGB1D4Q6XE38 83 aa13.34□□□□□ -0.27
RAB3IP-205ENST00000417413 COX11Q9Y6N1 276 aa13.34□□□□□ -0.27
RAB3IP-205ENST00000417413 A6NDN8 102 aa13.33□□□□□ -0.28
RAB3IP-205ENST00000417413 K7EP13 123 aa13.33□□□□□ -0.28
RAB3IP-205ENST00000417413 SPINK8P0C7L1 97 aa13.33□□□□□ -0.28
RAB3IP-205ENST00000417413 HIST1H4GQ99525 98 aa13.33□□□□□ -0.28
RAB3IP-205ENST00000417413 C11orf68Q9H3H3 251 aaKnown RBP13.33□□□□□ -0.28
RAB3IP-205ENST00000417413 PRB2P02812 416 aaPredicted RBP13.32□□□□□ -0.28
RAB3IP-205ENST00000417413 HTN3P15516 51 aa13.32□□□□□ -0.28
RAB3IP-205ENST00000417413 H3BRM9 83 aa13.31□□□□□ -0.28
RAB3IP-205ENST00000417413 SPATA25Q9BR10 227 aa13.31□□□□□ -0.28
RAB3IP-205ENST00000417413 DNAH3Q8TD57 4116 aa13.29□□□□□ -0.28
RAB3IP-205ENST00000417413 A0A1B0GUV1 79 aa13.29□□□□□ -0.28
RAB3IP-205ENST00000417413 MRPL23Q16540 153 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-205ENST00000417413 SPANXB1Q9NS25 103 aaPredicted RBP13.29□□□□□ -0.28
RAB3IP-205ENST00000417413 C10orf126Q8N4M7 172 aa13.28□□□□□ -0.28
RAB3IP-205ENST00000417413 ICOSQ9Y6W8 199 aa13.28□□□□□ -0.28
RAB3IP-205ENST00000417413 NOTCH1P46531 2555 aa13.28□□□□□ -0.28
RAB3IP-205ENST00000417413 IGLV5-39A0A0G2JS06 123 aa13.28□□□□□ -0.28
RAB3IP-205ENST00000417413 RBX1P62877 108 aa13.28□□□□□ -0.28
RAB3IP-205ENST00000417413 PTTG1IPP53801 180 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms