RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 A0A0J9YX75 114 aa9.7□□□□□ -0.86
SCN1B-202ENST00000415950 C20orf197Q8N268 126 aa9.7□□□□□ -0.86
SCN1B-202ENST00000415950 NEXN-AS1Q8NBZ9 246 aa9.7□□□□□ -0.86
SCN1B-202ENST00000415950 DEFB135Q30KP9 77 aa9.7□□□□□ -0.86
SCN1B-202ENST00000415950 NDUFV3P56181 108 aaKnown RBP9.7□□□□□ -0.86
SCN1B-202ENST00000415950 PROK1P58294 105 aa9.7□□□□□ -0.86
SCN1B-202ENST00000415950 ADORA2A-AS1P86434 159 aa9.7□□□□□ -0.86
SCN1B-202ENST00000415950 SDIM1Q6ZPB5 146 aa9.7□□□□□ -0.86
SCN1B-202ENST00000415950 SPAG11BQ08648 103 aa9.69□□□□□ -0.86
SCN1B-202ENST00000415950 COL6A3P12111 3177 aa9.69□□□□□ -0.86
SCN1B-202ENST00000415950 XGP55808 180 aa9.69□□□□□ -0.86
SCN1B-202ENST00000415950 UFSP1Q6NVU6 142 aa9.69□□□□□ -0.86
SCN1B-202ENST00000415950 C10orf99Q6UWK7 81 aa9.69□□□□□ -0.86
SCN1B-202ENST00000415950 SLPIP03973 132 aa9.68□□□□□ -0.86
SCN1B-202ENST00000415950 LINC00643Q86TS7 51 aa9.68□□□□□ -0.86
SCN1B-202ENST00000415950 NRACQ8N912 160 aa9.68□□□□□ -0.86
SCN1B-202ENST00000415950 C16orf74Q96GX8 76 aa9.68□□□□□ -0.86
SCN1B-202ENST00000415950 U3KQK5 164 aa9.68□□□□□ -0.86
SCN1B-202ENST00000415950 AKAP13Q12802 2813 aa9.68□□□□□ -0.86
SCN1B-202ENST00000415950 ZFAND2AQ8N6M9 145 aa9.68□□□□□ -0.86
SCN1B-202ENST00000415950 GPHB5Q86YW7 130 aa9.67□□□□□ -0.86
SCN1B-202ENST00000415950 SIRPDQ9H106 197 aa9.67□□□□□ -0.86
SCN1B-202ENST00000415950 ZFAND3Q9H8U3 227 aa9.67□□□□□ -0.86
SCN1B-202ENST00000415950 JMJD7-PLA2G4BH0Y9G9 81 aa9.67□□□□□ -0.86
SCN1B-202ENST00000415950 MIAQ16674 131 aa9.67□□□□□ -0.86
SCN1B-202ENST00000415950 C10orf105Q8TEF2 133 aa9.67□□□□□ -0.86
SCN1B-202ENST00000415950 Q6ZTI0 123 aa9.67□□□□□ -0.86
SCN1B-202ENST00000415950 K7EMT4 169 aa9.66□□□□□ -0.86
SCN1B-202ENST00000415950 SPART-AS1P0CW21 52 aa9.66□□□□□ -0.86
SCN1B-202ENST00000415950 PIK3CD-AS1Q5SR53 167 aa9.66□□□□□ -0.86
SCN1B-202ENST00000415950 RMI2Q96E14 147 aa9.66□□□□□ -0.86
SCN1B-202ENST00000415950 SCXQ7RTU7 201 aa9.66□□□□□ -0.86
SCN1B-202ENST00000415950 BRK1Q8WUW1 75 aa9.66□□□□□ -0.86
SCN1B-202ENST00000415950 CFAP47Q6ZTR5 3102 aa9.66□□□□□ -0.86
SCN1B-202ENST00000415950 FSTL3O95633 263 aa9.65□□□□□ -0.86
SCN1B-202ENST00000415950 LY6LH3BQJ8 138 aa9.64□□□□□ -0.87
SCN1B-202ENST00000415950 MED14OSP0DP75 135 aa9.64□□□□□ -0.87
SCN1B-202ENST00000415950 ZNF22P17026 224 aaPredicted RBP9.64□□□□□ -0.87
SCN1B-202ENST00000415950 HIGD2BQ4VC39 106 aa9.64□□□□□ -0.87
SCN1B-202ENST00000415950 RNF152Q8N8N0 203 aa9.64□□□□□ -0.87
SCN1B-202ENST00000415950 EXPH5Q8NEV8 1989 aa9.64□□□□□ -0.87
SCN1B-202ENST00000415950 NDUFA1O15239 70 aa9.64□□□□□ -0.87
SCN1B-202ENST00000415950 MP68P56378 58 aa9.64□□□□□ -0.87
SCN1B-202ENST00000415950 LINC00467Q9BRT7 94 aa9.64□□□□□ -0.87
SCN1B-202ENST00000415950 TRIAP1O43715 76 aa9.64□□□□□ -0.87
SCN1B-202ENST00000415950 CDSNQ15517 529 aa9.63□□□□□ -0.87
SCN1B-202ENST00000415950 A0A096LNI7 61 aa9.63□□□□□ -0.87
SCN1B-202ENST00000415950 DIRC1Q969H9 104 aa9.63□□□□□ -0.87
SCN1B-202ENST00000415950 LMO4P61968 165 aa9.63□□□□□ -0.87
SCN1B-202ENST00000415950 FAM110AQ9BQ89 295 aa9.63□□□□□ -0.87
SCN1B-202ENST00000415950 ODF3BA8MYP8 253 aa9.63□□□□□ -0.87
SCN1B-202ENST00000415950 CFAP126Q5VTH2 177 aa9.63□□□□□ -0.87
SCN1B-202ENST00000415950 TIRAPP58753 221 aa9.62□□□□□ -0.87
SCN1B-202ENST00000415950 Q6ZSV7 163 aa9.62□□□□□ -0.87
SCN1B-202ENST00000415950 BOD1L1Q8NFC6 3051 aa9.62□□□□□ -0.87
SCN1B-202ENST00000415950 EDN2P20800 178 aa9.62□□□□□ -0.87
SCN1B-202ENST00000415950 CRIP2P52943 208 aaPredicted RBP9.62□□□□□ -0.87
SCN1B-202ENST00000415950 RNASE3P12724 160 aaKnown RBP9.62□□□□□ -0.87
SCN1B-202ENST00000415950 SPANXCQ9NY87 97 aa9.62□□□□□ -0.87
SCN1B-202ENST00000415950 MYO15AQ9UKN7 3530 aa9.61□□□□□ -0.87
SCN1B-202ENST00000415950 IGLV4-3A0A075B6K6 122 aa9.61□□□□□ -0.87
SCN1B-202ENST00000415950 TMEM256-PLSCR3K7ERE1 68 aa9.61□□□□□ -0.87
SCN1B-202ENST00000415950 MPLKIPQ8TAP9 179 aa9.61□□□□□ -0.87
SCN1B-202ENST00000415950 MRPS12O15235 138 aaKnown RBP9.61□□□□□ -0.87
SCN1B-202ENST00000415950 SVIPQ8NHG7 77 aa9.61□□□□□ -0.87
SCN1B-202ENST00000415950 UPK3BQ9BT76 320 aa9.61□□□□□ -0.87
SCN1B-202ENST00000415950 ZNF580Q9UK33 172 aa9.61□□□□□ -0.87
SCN1B-202ENST00000415950 EYSQ5T1H1 3165 aa9.6□□□□□ -0.87
SCN1B-202ENST00000415950 DEFB113Q30KQ7 82 aa9.6□□□□□ -0.87
SCN1B-202ENST00000415950 LINC00269Q8N2A0 174 aa9.6□□□□□ -0.87
SCN1B-202ENST00000415950 MAP6D1Q9H9H5 199 aa9.6□□□□□ -0.87
SCN1B-202ENST00000415950 ADAMTS20P59510 1910 aa9.59□□□□□ -0.87
SCN1B-202ENST00000415950 XAGE1AQ9HD64 81 aa9.59□□□□□ -0.87
SCN1B-202ENST00000415950 A0A0U1RQV1 116 aa9.59□□□□□ -0.87
SCN1B-202ENST00000415950 LINC00308Q8TCZ7 52 aa9.59□□□□□ -0.87
SCN1B-202ENST00000415950 PRO0255Q9UI72 69 aa9.59□□□□□ -0.87
SCN1B-202ENST00000415950 NDUFB1O75438 58 aa9.59□□□□□ -0.87
SCN1B-202ENST00000415950 ENHOQ6UWT2 76 aa9.59□□□□□ -0.87
SCN1B-202ENST00000415950 CCL18P55774 89 aa9.58□□□□□ -0.88
SCN1B-202ENST00000415950 IGKV2-24A0A0C4DH68 120 aa9.58□□□□□ -0.88
SCN1B-202ENST00000415950 J3QKU1 62 aa9.58□□□□□ -0.88
SCN1B-202ENST00000415950 ANKRD17O75179 2603 aaKnown RBP9.58□□□□□ -0.88
SCN1B-202ENST00000415950 TMEM263Q8WUH6 116 aaKnown RBP9.58□□□□□ -0.88
SCN1B-202ENST00000415950 CCDC179H3BU77 68 aa9.58□□□□□ -0.88
SCN1B-202ENST00000415950 NDUFC2O95298 119 aa9.58□□□□□ -0.88
SCN1B-202ENST00000415950 SPTSSBQ8NFR3 76 aa9.58□□□□□ -0.88
SCN1B-202ENST00000415950 TRBV10-1A0A0K0K1A3 114 aa9.57□□□□□ -0.88
SCN1B-202ENST00000415950 F8W735 103 aaPredicted RBP9.57□□□□□ -0.88
SCN1B-202ENST00000415950 CHKB-CPT1BH3BT56 60 aa9.57□□□□□ -0.88
SCN1B-202ENST00000415950 A6NDX4 124 aa9.57□□□□□ -0.88
SCN1B-202ENST00000415950 M0QY20 66 aa9.57□□□□□ -0.88
SCN1B-202ENST00000415950 UQCRQO14949 82 aa9.57□□□□□ -0.88
SCN1B-202ENST00000415950 BPY2O14599 106 aa9.57□□□□□ -0.88
SCN1B-202ENST00000415950 HIGD2AQ9BW72 106 aa9.57□□□□□ -0.88
SCN1B-202ENST00000415950 TMEM223A0PJW6 202 aa9.57□□□□□ -0.88
SCN1B-202ENST00000415950 C19orf84I3L1E1 186 aa9.57□□□□□ -0.88
SCN1B-202ENST00000415950 C9orf66Q5T8R8 295 aa9.57□□□□□ -0.88
SCN1B-202ENST00000415950 FLNBO75369 2602 aaKnown RBP9.56□□□□□ -0.88
SCN1B-202ENST00000415950 K7EQG2 157 aa9.56□□□□□ -0.88
SCN1B-202ENST00000415950 COX7BP24311 80 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms