RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 TEN1Q86WV5 123 aa10.36□□□□□ -0.75
SGCE-202ENST00000415788 LYRM9A8MSI8 78 aa10.36□□□□□ -0.75
SGCE-202ENST00000415788 GNRH2O43555 120 aa10.36□□□□□ -0.75
SGCE-202ENST00000415788 SPINK8P0C7L1 97 aa10.36□□□□□ -0.75
SGCE-202ENST00000415788 SPART-AS1P0CW21 52 aa10.36□□□□□ -0.75
SGCE-202ENST00000415788 ASIPP42127 132 aa10.36□□□□□ -0.75
SGCE-202ENST00000415788 POM121L12Q8N7R1 296 aa10.36□□□□□ -0.75
SGCE-202ENST00000415788 LOC107984156A0A0G2JMH3 177 aa10.35□□□□□ -0.75
SGCE-202ENST00000415788 S100A4P26447 101 aaKnown RBP10.35□□□□□ -0.75
SGCE-202ENST00000415788 ARL17AQ8IVW1 177 aa10.35□□□□□ -0.75
SGCE-202ENST00000415788 IL17DQ8TAD2 202 aa10.35□□□□□ -0.75
SGCE-202ENST00000415788 SPXQ9BT56 116 aa10.35□□□□□ -0.75
SGCE-202ENST00000415788 EDA2RQ9HAV5 297 aa10.35□□□□□ -0.75
SGCE-202ENST00000415788 MDFICQ9P1T7 246 aa10.35□□□□□ -0.75
SGCE-202ENST00000415788 M0QXV9 152 aa10.34□□□□□ -0.75
SGCE-202ENST00000415788 NFE4Q86UQ8 179 aa10.34□□□□□ -0.75
SGCE-202ENST00000415788 PHLDA3Q9Y5J5 127 aa10.34□□□□□ -0.75
SGCE-202ENST00000415788 DNAH9Q9NYC9 4486 aa10.34□□□□□ -0.75
SGCE-202ENST00000415788 TMEM262E9PQX1 116 aa10.34□□□□□ -0.75
SGCE-202ENST00000415788 FAM222AQ5U5X8 452 aa10.34□□□□□ -0.75
SGCE-202ENST00000415788 Q6ZUT4 128 aa10.34□□□□□ -0.75
SGCE-202ENST00000415788 PLEKHB2Q96CS7 222 aa10.34□□□□□ -0.75
SGCE-202ENST00000415788 TMEM141Q96I45 108 aa10.34□□□□□ -0.75
SGCE-202ENST00000415788 NOP10Q9NPE3 64 aaKnown RBP10.34□□□□□ -0.75
SGCE-202ENST00000415788 A0A0J9YY99 117 aa10.33□□□□□ -0.76
SGCE-202ENST00000415788 A8MWV9 139 aa10.33□□□□□ -0.76
SGCE-202ENST00000415788 C11orf45Q8TAV5 145 aa10.33□□□□□ -0.76
SGCE-202ENST00000415788 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
SGCE-202ENST00000415788 C9orf85Q96MD7 179 aa10.33□□□□□ -0.76
SGCE-202ENST00000415788 HUWE1Q7Z6Z7 4374 aaKnown RBP10.32□□□□□ -0.76
SGCE-202ENST00000415788 TRAV26-1A0A087WT03 109 aa10.32□□□□□ -0.76
SGCE-202ENST00000415788 RNASE3P12724 160 aaKnown RBP10.32□□□□□ -0.76
SGCE-202ENST00000415788 C11orf86A6NJI1 115 aa10.32□□□□□ -0.76
SGCE-202ENST00000415788 MGPP08493 103 aa10.32□□□□□ -0.76
SGCE-202ENST00000415788 PMVKQ15126 192 aa10.32□□□□□ -0.76
SGCE-202ENST00000415788 C14orf178Q8N769 122 aaPredicted RBP10.32□□□□□ -0.76
SGCE-202ENST00000415788 M0R2P5 195 aa10.31□□□□□ -0.76
SGCE-202ENST00000415788 NXPH4O95158 308 aa10.31□□□□□ -0.76
SGCE-202ENST00000415788 CRYGDP07320 174 aa10.31□□□□□ -0.76
SGCE-202ENST00000415788 ZFP2Q6ZN57 461 aa10.31□□□□□ -0.76
SGCE-202ENST00000415788 C10orf126Q8N4M7 172 aa10.31□□□□□ -0.76
SGCE-202ENST00000415788 SLC25A29Q8N8R3 303 aa10.31□□□□□ -0.76
SGCE-202ENST00000415788 CARD19Q96LW7 228 aa10.31□□□□□ -0.76
SGCE-202ENST00000415788 TIMM17AQ99595 171 aa10.31□□□□□ -0.76
SGCE-202ENST00000415788 CELA1Q9UNI1 258 aa10.31□□□□□ -0.76
SGCE-202ENST00000415788 IGLV4-69A0A075B6H9 119 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 TCL1BO95988 128 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 IGHV3-30P01768 117 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 MT-ATP8P03928 68 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 IGHV3-30-5P0DP03 117 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 LINC00612Q8N6U2 182 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 PTH2Q96A98 100 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 TRGV1A0A0A0MS02 117 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 IGIPA6NJ69 53 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 XGP55808 180 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 DAD1P61803 113 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 PIK3CD-AS1Q5SR53 167 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 PRO1854Q9UHT4 67 aa10.3□□□□□ -0.76
SGCE-202ENST00000415788 CFC1BP0CG36 223 aa10.29□□□□□ -0.76
SGCE-202ENST00000415788 CFC1P0CG37 223 aa10.29□□□□□ -0.76
SGCE-202ENST00000415788 ERG28Q9UKR5 140 aa10.29□□□□□ -0.76
SGCE-202ENST00000415788 VCYO14598 125 aa10.28□□□□□ -0.76
SGCE-202ENST00000415788 DEFB130BP0DP73 79 aa10.28□□□□□ -0.76
SGCE-202ENST00000415788 DEFB130AP0DP74 79 aa10.28□□□□□ -0.76
SGCE-202ENST00000415788 ZNF876PQ49A33 203 aa10.28□□□□□ -0.76
SGCE-202ENST00000415788 Q6ZTI0 123 aa10.28□□□□□ -0.76
SGCE-202ENST00000415788 WWC2-AS2Q96NR7 200 aa10.28□□□□□ -0.76
SGCE-202ENST00000415788 NBEAL2Q6ZNJ1 2754 aa10.28□□□□□ -0.76
SGCE-202ENST00000415788 GAGE7O76087 117 aa10.27□□□□□ -0.76
SGCE-202ENST00000415788 TSHBP01222 138 aa10.27□□□□□ -0.76
SGCE-202ENST00000415788 GAGE12FP0CL80 117 aa10.27□□□□□ -0.76
SGCE-202ENST00000415788 GAGE12GP0CL81 117 aa10.27□□□□□ -0.76
SGCE-202ENST00000415788 GAGE12IP0CL82 117 aa10.27□□□□□ -0.76
SGCE-202ENST00000415788 POLR2KP53803 58 aaKnown RBP10.27□□□□□ -0.76
SGCE-202ENST00000415788 TRGV2A0A075B6R0 118 aa10.27□□□□□ -0.77
SGCE-202ENST00000415788 SCGB1C2P0DMR2 95 aa10.27□□□□□ -0.77
SGCE-202ENST00000415788 NANOS2P60321 138 aaKnown RBP10.27□□□□□ -0.77
SGCE-202ENST00000415788 KIR2DL4Q99706 377 aa10.27□□□□□ -0.77
SGCE-202ENST00000415788 KIF25-AS1Q9Y6Z4 181 aa10.27□□□□□ -0.77
SGCE-202ENST00000415788 ZFAND6Q6FIF0 208 aa10.26□□□□□ -0.77
SGCE-202ENST00000415788 TENM3Q9P273 2699 aa10.26□□□□□ -0.77
SGCE-202ENST00000415788 P0DMU3 169 aa10.25□□□□□ -0.77
SGCE-202ENST00000415788 FAM231AP0DMU4 169 aa10.25□□□□□ -0.77
SGCE-202ENST00000415788 FAM231CP0DMU5 169 aa10.25□□□□□ -0.77
SGCE-202ENST00000415788 LGALS3P17931 250 aaKnown RBP10.25□□□□□ -0.77
SGCE-202ENST00000415788 ANKRD29Q8N6D5 301 aa10.25□□□□□ -0.77
SGCE-202ENST00000415788 LINC01600Q96MT4 127 aa10.25□□□□□ -0.77
SGCE-202ENST00000415788 A0A0B4J2C4 111 aa10.25□□□□□ -0.77
SGCE-202ENST00000415788 J3QQQ9 107 aa10.25□□□□□ -0.77
SGCE-202ENST00000415788 ATP5G1P05496 136 aa10.25□□□□□ -0.77
SGCE-202ENST00000415788 LINC00315P59091 139 aa10.25□□□□□ -0.77
SGCE-202ENST00000415788 Q6ZTC4 211 aa10.25□□□□□ -0.77
SGCE-202ENST00000415788 TRBV6-5A0A0K0K1A5 114 aa10.24□□□□□ -0.77
SGCE-202ENST00000415788 TMEM170BQ5T4T1 132 aa10.24□□□□□ -0.77
SGCE-202ENST00000415788 SFTA2Q6UW10 78 aa10.24□□□□□ -0.77
SGCE-202ENST00000415788 TRAV4A0A0B4J268 109 aa10.23□□□□□ -0.77
SGCE-202ENST00000415788 LEPROTO15243 131 aa10.23□□□□□ -0.77
SGCE-202ENST00000415788 SLC25A20O43772 301 aa10.23□□□□□ -0.77
SGCE-202ENST00000415788 AMELXQ99217 191 aa10.23□□□□□ -0.77
SGCE-202ENST00000415788 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms