RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 PCP4L1A6NKN8 68 aa5.58□□□□□ -1.52
HERPUD2-203ENST00000413517 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.58□□□□□ -1.52
HERPUD2-203ENST00000413517 AMTP48728 403 aa5.58□□□□□ -1.52
HERPUD2-203ENST00000413517 ELOBQ15370 118 aa5.58□□□□□ -1.52
HERPUD2-203ENST00000413517 TMEM97Q5BJF2 176 aa5.58□□□□□ -1.52
HERPUD2-203ENST00000413517 UQCC3Q6UW78 93 aa5.58□□□□□ -1.52
HERPUD2-203ENST00000413517 RMI2Q96E14 147 aa5.58□□□□□ -1.52
HERPUD2-203ENST00000413517 RNF185Q96GF1 192 aa5.58□□□□□ -1.52
HERPUD2-203ENST00000413517 URB1-AS1Q96HZ7 61 aa5.58□□□□□ -1.52
HERPUD2-203ENST00000413517 TMEM243Q9BU79 118 aa5.58□□□□□ -1.52
HERPUD2-203ENST00000413517 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
HERPUD2-203ENST00000413517 ABCA13Q86UQ4 5058 aa5.58□□□□□ -1.52
HERPUD2-203ENST00000413517 A0A1B0GUT8 65 aa5.57□□□□□ -1.52
HERPUD2-203ENST00000413517 F8W036 122 aa5.57□□□□□ -1.52
HERPUD2-203ENST00000413517 SNAPINO95295 136 aa5.57□□□□□ -1.52
HERPUD2-203ENST00000413517 SMR3BP02814 79 aaPredicted RBP5.57□□□□□ -1.52
HERPUD2-203ENST00000413517 S100A8P05109 93 aa5.57□□□□□ -1.52
HERPUD2-203ENST00000413517 RPS10P46783 165 aaKnown RBP5.57□□□□□ -1.52
HERPUD2-203ENST00000413517 Q0VG73 95 aa5.57□□□□□ -1.52
HERPUD2-203ENST00000413517 TMEM241Q24JQ0 296 aa5.57□□□□□ -1.52
HERPUD2-203ENST00000413517 Q6ZSA8 131 aa5.57□□□□□ -1.52
HERPUD2-203ENST00000413517 LINC00269Q8N2A0 174 aa5.57□□□□□ -1.52
HERPUD2-203ENST00000413517 NUP35Q8NFH5 326 aa5.57□□□□□ -1.52
HERPUD2-203ENST00000413517 COX11Q9Y6N1 276 aa5.57□□□□□ -1.52
HERPUD2-203ENST00000413517 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 FAM231BA6NCW3 169 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 SDHAF1A6NFY7 115 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 HLA-DQA1P01909 254 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 CRPP02741 224 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 COTL1Q14019 142 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 ADIRFQ15847 76 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 MIAQ16674 131 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 KCNIP4Q6PIL6 250 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 AMN1Q8IY45 258 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 FRZBQ92765 325 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 C12orf57Q99622 126 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 TMEM70Q9BUB7 260 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 TMEM191AQ9H0A3 160 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 NAT8Q9UHE5 227 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 VPS13BQ7Z7G8 4022 aa5.56□□□□□ -1.52
HERPUD2-203ENST00000413517 IGLV10-54A0A075B6I4 117 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 TRBV6-5A0A0K0K1A5 114 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 A0A1B0GUV1 79 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 SMKR1H3BMG3 65 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 NCR2O95944 276 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 SMIM6P0DI80 62 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 RAB4AP20338 218 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 AKR1D1P51857 326 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 PKIAP61925 76 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 REG3AQ06141 175 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 FAM74A3Q4VXF1 159 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 Q5VSD8 79 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 SVBPQ8N300 66 aa5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 CHTOPQ9Y3Y2 248 aaKnown RBP5.55□□□□□ -1.52
HERPUD2-203ENST00000413517 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.54□□□□□ -1.52
HERPUD2-203ENST00000413517 SMIM27A0A1W2PRY6 76 aa5.54□□□□□ -1.52
HERPUD2-203ENST00000413517 IGKV2-29A2NJV5 120 aaPredicted RBP5.54□□□□□ -1.52
HERPUD2-203ENST00000413517 TSHBP01222 138 aa5.54□□□□□ -1.52
HERPUD2-203ENST00000413517 APOC3P02656 99 aa5.54□□□□□ -1.52
HERPUD2-203ENST00000413517 PRSS1P07477 247 aa5.54□□□□□ -1.52
HERPUD2-203ENST00000413517 POLR2KP53803 58 aaKnown RBP5.54□□□□□ -1.52
HERPUD2-203ENST00000413517 PEA15Q15121 130 aa5.54□□□□□ -1.52
HERPUD2-203ENST00000413517 SMIM15Q7Z3B0 74 aa5.54□□□□□ -1.52
HERPUD2-203ENST00000413517 NRACQ8N912 160 aa5.54□□□□□ -1.52
HERPUD2-203ENST00000413517 FAT1Q14517 4588 aa5.53□□□□□ -1.52
HERPUD2-203ENST00000413517 EPM2AB3EWF7 344 aa5.53□□□□□ -1.52
HERPUD2-203ENST00000413517 ESDP10768 282 aa5.53□□□□□ -1.52
HERPUD2-203ENST00000413517 RAB5BP61020 215 aa5.53□□□□□ -1.52
HERPUD2-203ENST00000413517 BORCS7Q96B45 105 aa5.53□□□□□ -1.52
HERPUD2-203ENST00000413517 SMDT1Q9H4I9 107 aa5.53□□□□□ -1.52
HERPUD2-203ENST00000413517 TMEM242Q9NWH2 141 aa5.53□□□□□ -1.52
HERPUD2-203ENST00000413517 DMBT1Q9UGM3 2413 aaPredicted RBP5.53□□□□□ -1.52
HERPUD2-203ENST00000413517 A0A1B0GXF2 115 aa5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 UBE2L6O14933 153 aa5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 APCSP02743 223 aa5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 FGF6P10767 208 aa5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 S100PP25815 95 aa5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 RIGQ13278 110 aa5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 MRPL51Q4U2R6 128 aaKnown RBP5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 C10orf25Q5T742 122 aa5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 FAM104BQ5XKR9 115 aa5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 MRAP2Q96G30 205 aa5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 ST20Q9HBF5 79 aa5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 NAT8BQ9UHF3 227 aa5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 DNAH8Q96JB1 4490 aa5.52□□□□□ -1.53
HERPUD2-203ENST00000413517 IGKV3OR2-268A0A0C4DH90 116 aa5.51□□□□□ -1.53
HERPUD2-203ENST00000413517 TRBV27A0A0K0K1C4 114 aa5.51□□□□□ -1.53
HERPUD2-203ENST00000413517 PANO1I0J062 215 aa5.51□□□□□ -1.53
HERPUD2-203ENST00000413517 I3L3M4 83 aa5.51□□□□□ -1.53
HERPUD2-203ENST00000413517 SLPIP03973 132 aa5.51□□□□□ -1.53
HERPUD2-203ENST00000413517 PMCHP20382 165 aa5.51□□□□□ -1.53
HERPUD2-203ENST00000413517 MRPL54Q6P161 138 aaKnown RBP5.51□□□□□ -1.53
HERPUD2-203ENST00000413517 SCXQ7RTU7 201 aa5.51□□□□□ -1.53
HERPUD2-203ENST00000413517 TRAV8-4A0A0B4J246 113 aa5.5□□□□□ -1.53
HERPUD2-203ENST00000413517 C14orf177Q52M58 125 aa5.5□□□□□ -1.53
HERPUD2-203ENST00000413517 AMMECR1LQ6DCA0 310 aa5.5□□□□□ -1.53
HERPUD2-203ENST00000413517 RNASEKQ6P5S7 137 aaKnown RBP5.5□□□□□ -1.53
HERPUD2-203ENST00000413517 C15orf56Q8N910 161 aa5.5□□□□□ -1.53
HERPUD2-203ENST00000413517 C1orf196B1AJZ1 125 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms