RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 KIR2DL5BA0A0G2JPC4 375 aa6.4□□□□□ -1.38
SYNE1-211ENST00000413186 IGLV2-8P01709 118 aa6.4□□□□□ -1.38
SYNE1-211ENST00000413186 C18orf65Q6ZTR6 163 aa6.4□□□□□ -1.38
SYNE1-211ENST00000413186 KIR2DL5AQ8N109 375 aa6.4□□□□□ -1.38
SYNE1-211ENST00000413186 GNRH2O43555 120 aa6.4□□□□□ -1.38
SYNE1-211ENST00000413186 NEGR1Q7Z3B1 354 aa6.4□□□□□ -1.39
SYNE1-211ENST00000413186 DEFB125Q8N687 156 aa6.4□□□□□ -1.39
SYNE1-211ENST00000413186 CFHR3Q02985 330 aa6.39□□□□□ -1.39
SYNE1-211ENST00000413186 NOP10Q9NPE3 64 aaKnown RBP6.39□□□□□ -1.39
SYNE1-211ENST00000413186 IGHV4-4A0A075B6R2 117 aa6.39□□□□□ -1.39
SYNE1-211ENST00000413186 SMKR1H3BMG3 65 aa6.39□□□□□ -1.39
SYNE1-211ENST00000413186 A0A1B0GXF2 115 aa6.39□□□□□ -1.39
SYNE1-211ENST00000413186 SMIM9A6NGZ8 99 aa6.39□□□□□ -1.39
SYNE1-211ENST00000413186 EREGO14944 169 aa6.39□□□□□ -1.39
SYNE1-211ENST00000413186 RHOHQ15669 191 aa6.39□□□□□ -1.39
SYNE1-211ENST00000413186 VSIG2Q96IQ7 327 aa6.39□□□□□ -1.39
SYNE1-211ENST00000413186 NPYP01303 97 aa6.39□□□□□ -1.39
SYNE1-211ENST00000413186 BAALC-AS2P0C853 105 aa6.39□□□□□ -1.39
SYNE1-211ENST00000413186 ZNF747Q9BV97 191 aa6.39□□□□□ -1.39
SYNE1-211ENST00000413186 GTSF1Q8WW33 167 aa6.38□□□□□ -1.39
SYNE1-211ENST00000413186 CENPEQ02224 2701 aa6.38□□□□□ -1.39
SYNE1-211ENST00000413186 C2orf66Q6UXQ4 117 aa6.38□□□□□ -1.39
SYNE1-211ENST00000413186 A0A0J9YWU9 116 aa6.38□□□□□ -1.39
SYNE1-211ENST00000413186 F8W735 103 aaPredicted RBP6.38□□□□□ -1.39
SYNE1-211ENST00000413186 I3L3M4 83 aa6.38□□□□□ -1.39
SYNE1-211ENST00000413186 COX8AP10176 69 aa6.38□□□□□ -1.39
SYNE1-211ENST00000413186 DEFB135Q30KP9 77 aa6.38□□□□□ -1.39
SYNE1-211ENST00000413186 C4orf48Q5BLP8 95 aa6.38□□□□□ -1.39
SYNE1-211ENST00000413186 Q6ZUT4 128 aa6.38□□□□□ -1.39
SYNE1-211ENST00000413186 DSCAML1Q8TD84 2053 aa6.38□□□□□ -1.39
SYNE1-211ENST00000413186 ATP5G1P05496 136 aa6.38□□□□□ -1.39
SYNE1-211ENST00000413186 TMEM263Q8WUH6 116 aaKnown RBP6.38□□□□□ -1.39
SYNE1-211ENST00000413186 CUBNO60494 3623 aa6.37□□□□□ -1.39
SYNE1-211ENST00000413186 DEFB1P60022 68 aa6.37□□□□□ -1.39
SYNE1-211ENST00000413186 Q8N1Y9 231 aa6.37□□□□□ -1.39
SYNE1-211ENST00000413186 TMEM254Q8TBM7 123 aa6.37□□□□□ -1.39
SYNE1-211ENST00000413186 PTH2Q96A98 100 aa6.37□□□□□ -1.39
SYNE1-211ENST00000413186 C9orf118A6NHY6 69 aa6.37□□□□□ -1.39
SYNE1-211ENST00000413186 FAM222AQ5U5X8 452 aa6.37□□□□□ -1.39
SYNE1-211ENST00000413186 IGHV3-16A0A0C4DH30 117 aa6.37□□□□□ -1.39
SYNE1-211ENST00000413186 F8VRH5 84 aa6.37□□□□□ -1.39
SYNE1-211ENST00000413186 IGLV1-51P01701 117 aa6.37□□□□□ -1.39
SYNE1-211ENST00000413186 SH2D6Q7Z4S9 175 aa6.37□□□□□ -1.39
SYNE1-211ENST00000413186 Q8N9L7 120 aa6.37□□□□□ -1.39
SYNE1-211ENST00000413186 C2CD3Q4AC94 2353 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 K7EP34 96 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 CCL25O15444 150 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 SDHAF1A6NFY7 115 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 KRTAP1-3Q8IUG1 177 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 DCANP1Q8TF63 244 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 TRBV25-1A0A075B6N4 114 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 SMIM26A0A096LP01 95 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 SPRY2O43597 315 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 SS18Q15532 418 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 STPG4Q8N801 248 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 DAND5Q8N907 189 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 KIR2DL5BQ8NHK3 375 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 A0A0B4J2C4 111 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 IGLL5B9A064 214 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 PRO1854Q9UHT4 67 aa6.36□□□□□ -1.39
SYNE1-211ENST00000413186 CHD6Q8TD26 2715 aa6.35□□□□□ -1.39
SYNE1-211ENST00000413186 TRAV13-2A0A0B4J235 113 aa6.35□□□□□ -1.39
SYNE1-211ENST00000413186 LINC01545Q5VT33 79 aa6.35□□□□□ -1.39
SYNE1-211ENST00000413186 PCP2Q8IVA1 136 aa6.35□□□□□ -1.39
SYNE1-211ENST00000413186 LINC00482Q8N8I6 264 aa6.35□□□□□ -1.39
SYNE1-211ENST00000413186 IL17DQ8TAD2 202 aa6.35□□□□□ -1.39
SYNE1-211ENST00000413186 FLNAP21333 2647 aaKnown RBP6.35□□□□□ -1.39
SYNE1-211ENST00000413186 LRCOL1A6NCL2 159 aa6.34□□□□□ -1.39
SYNE1-211ENST00000413186 SPATA12Q7Z6I5 190 aa6.34□□□□□ -1.39
SYNE1-211ENST00000413186 TP53TG1Q9Y2A0 90 aa6.34□□□□□ -1.39
SYNE1-211ENST00000413186 DCHS2Q6V1P9 2916 aa6.34□□□□□ -1.39
SYNE1-211ENST00000413186 IGHV4-30-4P0DP06 118 aa6.34□□□□□ -1.39
SYNE1-211ENST00000413186 KLK9Q2XQG4 91 aa6.34□□□□□ -1.39
SYNE1-211ENST00000413186 MRPL35Q9NZE8 188 aaKnown RBP6.34□□□□□ -1.39
SYNE1-211ENST00000413186 ITPR3Q14573 2671 aa6.34□□□□□ -1.39
SYNE1-211ENST00000413186 HERVK_113P63121 156 aa6.34□□□□□ -1.39
SYNE1-211ENST00000413186 TEX49A0A1B0GTD5 131 aa6.33□□□□□ -1.4
SYNE1-211ENST00000413186 MRPS12O15235 138 aaKnown RBP6.33□□□□□ -1.4
SYNE1-211ENST00000413186 NUPR1O60356 82 aa6.33□□□□□ -1.4
SYNE1-211ENST00000413186 ZFAND2AQ8N6M9 145 aa6.33□□□□□ -1.4
SYNE1-211ENST00000413186 IGLC6P0CF74 106 aa6.33□□□□□ -1.4
SYNE1-211ENST00000413186 MIFP14174 115 aa6.33□□□□□ -1.4
SYNE1-211ENST00000413186 ZNF706Q9Y5V0 76 aaPredicted RBP6.33□□□□□ -1.4
SYNE1-211ENST00000413186 NACAE9PAV3 2078 aa6.33□□□□□ -1.4
SYNE1-211ENST00000413186 PRYO14603 147 aa6.33□□□□□ -1.4
SYNE1-211ENST00000413186 HIGD2BQ4VC39 106 aa6.33□□□□□ -1.4
SYNE1-211ENST00000413186 SOSTDC1Q6X4U4 206 aa6.33□□□□□ -1.4
SYNE1-211ENST00000413186 A0A1W2PPM0 123 aa6.32□□□□□ -1.4
SYNE1-211ENST00000413186 ZNF80P51504 273 aaPredicted RBP6.32□□□□□ -1.4
SYNE1-211ENST00000413186 C1orf158Q8N1D5 194 aa6.32□□□□□ -1.4
SYNE1-211ENST00000413186 ICOSQ9Y6W8 199 aa6.32□□□□□ -1.4
SYNE1-211ENST00000413186 RNASE3P12724 160 aaKnown RBP6.32□□□□□ -1.4
SYNE1-211ENST00000413186 ETDCA0A1B0GVM5 59 aa6.31□□□□□ -1.4
SYNE1-211ENST00000413186 ODF3L2Q3SX64 289 aa6.31□□□□□ -1.4
SYNE1-211ENST00000413186 TET2Q6N021 2002 aaPredicted RBP6.31□□□□□ -1.4
SYNE1-211ENST00000413186 MDFIQ99750 246 aa6.31□□□□□ -1.4
SYNE1-211ENST00000413186 MDFICQ9P1T7 246 aa6.31□□□□□ -1.4
SYNE1-211ENST00000413186 KLLNB2CW77 178 aa6.31□□□□□ -1.4
SYNE1-211ENST00000413186 K7EQD1 137 aa6.31□□□□□ -1.4
SYNE1-211ENST00000413186 UQCRQO14949 82 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms