RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ZNRD1Q9P1U0 126 aa3.66□□□□□ -1.82
HERC4-205ENST00000412272 VPS13AQ96RL7 3174 aa3.66□□□□□ -1.82
HERC4-205ENST00000412272 LY6G6EA0A0G2JKS1 128 aa3.65□□□□□ -1.82
HERC4-205ENST00000412272 LOC100131303A0A0U1RQF7 123 aa3.65□□□□□ -1.82
HERC4-205ENST00000412272 LINC00308Q8TCZ7 52 aa3.65□□□□□ -1.82
HERC4-205ENST00000412272 TTTY12Q9BZ98 90 aa3.65□□□□□ -1.82
HERC4-205ENST00000412272 U3KQA8 63 aa3.65□□□□□ -1.82
HERC4-205ENST00000412272 TRAV21A0A0B4J279 112 aa3.65□□□□□ -1.82
HERC4-205ENST00000412272 IGHV3-64DA0A0J9YX35 117 aa3.65□□□□□ -1.82
HERC4-205ENST00000412272 LINC01547P58512 204 aaPredicted RBP3.65□□□□□ -1.82
HERC4-205ENST00000412272 Q8N3U1 123 aa3.65□□□□□ -1.82
HERC4-205ENST00000412272 CFAP54Q96N23 3096 aa3.65□□□□□ -1.83
HERC4-205ENST00000412272 CHKB-CPT1BH3BT56 60 aa3.65□□□□□ -1.83
HERC4-205ENST00000412272 IGLV1-47P01700 117 aa3.65□□□□□ -1.83
HERC4-205ENST00000412272 RNASE3P12724 160 aaKnown RBP3.65□□□□□ -1.83
HERC4-205ENST00000412272 MOBPQ13875 183 aa3.65□□□□□ -1.83
HERC4-205ENST00000412272 IGLV5-39A0A0G2JS06 123 aa3.65□□□□□ -1.83
HERC4-205ENST00000412272 ZFAND2AQ8N6M9 145 aa3.65□□□□□ -1.83
HERC4-205ENST00000412272 UBL5Q9BZL1 73 aa3.65□□□□□ -1.83
HERC4-205ENST00000412272 MALRD1Q5VYJ5 2156 aa3.64□□□□□ -1.83
HERC4-205ENST00000412272 SUMO4Q6EEV6 95 aa3.64□□□□□ -1.83
HERC4-205ENST00000412272 KAAG1Q9UBP8 84 aa3.64□□□□□ -1.83
HERC4-205ENST00000412272 IGKV2-29A2NJV5 120 aaPredicted RBP3.64□□□□□ -1.83
HERC4-205ENST00000412272 H0YGX0 51 aa3.64□□□□□ -1.83
HERC4-205ENST00000412272 IGFL4Q6B9Z1 124 aa3.64□□□□□ -1.83
HERC4-205ENST00000412272 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
HERC4-205ENST00000412272 IGHV1OR15-1A0A075B7D0 117 aa3.64□□□□□ -1.83
HERC4-205ENST00000412272 IGHV3-21A0A0B4J1V1 117 aa3.64□□□□□ -1.83
HERC4-205ENST00000412272 C19orf54Q5BKX5 351 aa3.64□□□□□ -1.83
HERC4-205ENST00000412272 PRR9Q5T870 116 aa3.64□□□□□ -1.83
HERC4-205ENST00000412272 PLCE1Q9P212 2302 aa3.63□□□□□ -1.83
HERC4-205ENST00000412272 NAV3Q8IVL0 2385 aa3.63□□□□□ -1.83
HERC4-205ENST00000412272 A0A0J9YXV3 536 aa3.63□□□□□ -1.83
HERC4-205ENST00000412272 LY6HO94772 140 aa3.63□□□□□ -1.83
HERC4-205ENST00000412272 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
HERC4-205ENST00000412272 IGHV1-8P0DP01 117 aa3.63□□□□□ -1.83
HERC4-205ENST00000412272 RNASE13Q5GAN3 156 aaKnown RBP3.63□□□□□ -1.83
HERC4-205ENST00000412272 OCR1Q9BZK8 76 aa3.63□□□□□ -1.83
HERC4-205ENST00000412272 ZNF706Q9Y5V0 76 aaPredicted RBP3.63□□□□□ -1.83
HERC4-205ENST00000412272 TRBV6-8A0A0A6YYG3 113 aa3.63□□□□□ -1.83
HERC4-205ENST00000412272 Q6ZTI0 123 aa3.63□□□□□ -1.83
HERC4-205ENST00000412272 DCHS1Q96JQ0 3298 aa3.63□□□□□ -1.83
HERC4-205ENST00000412272 CLPSL1A2RUU4 121 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 B4DSR2 109 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 C3orf84H3BNL1 204 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 M0QY20 66 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 Q75L30 129 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 RPL36ALQ969Q0 106 aaKnown RBP3.62□□□□□ -1.83
HERC4-205ENST00000412272 HIGD2AQ9BW72 106 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 ARRDC1-AS1Q9H2J1 176 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 C19orf73Q9NVV2 129 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 BRWD1Q9NSI6 2320 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 JMJD7-PLA2G4BH0Y9G9 81 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 CYP4F30PQ9H0H9 118 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 CNTRLQ7Z7A1 2325 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 CDC42SE2Q9NRR3 84 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 IGHV1-46P01743 117 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 PRR3P79522 188 aaKnown RBP3.62□□□□□ -1.83
HERC4-205ENST00000412272 C6orf99Q4VX62 202 aa3.62□□□□□ -1.83
HERC4-205ENST00000412272 ZNF318Q5VUA4 2279 aa3.61□□□□□ -1.83
HERC4-205ENST00000412272 BPY2O14599 106 aa3.61□□□□□ -1.83
HERC4-205ENST00000412272 Q8N9P0 234 aaPredicted RBP3.61□□□□□ -1.83
HERC4-205ENST00000412272 LY6G6DO95868 133 aa3.61□□□□□ -1.83
HERC4-205ENST00000412272 PRM2P04554 102 aa3.61□□□□□ -1.83
HERC4-205ENST00000412272 MGPP08493 103 aa3.61□□□□□ -1.83
HERC4-205ENST00000412272 CCL3L1P16619 93 aa3.61□□□□□ -1.83
HERC4-205ENST00000412272 ORMDL1Q9P0S3 153 aa3.61□□□□□ -1.83
HERC4-205ENST00000412272 PRRC2BQ5JSZ5 2229 aaKnown RBP3.61□□□□□ -1.83
HERC4-205ENST00000412272 C9orf116Q5BN46 136 aaPredicted RBP3.61□□□□□ -1.83
HERC4-205ENST00000412272 F5P12259 2224 aa3.61□□□□□ -1.83
HERC4-205ENST00000412272 SPINK14Q6IE38 97 aa3.6□□□□□ -1.83
HERC4-205ENST00000412272 C9orf106Q8NAJ2 232 aa3.6□□□□□ -1.83
HERC4-205ENST00000412272 DEFB104AQ8WTQ1 72 aa3.6□□□□□ -1.83
HERC4-205ENST00000412272 LOC110117498A0A087WWA1 95 aa3.6□□□□□ -1.83
HERC4-205ENST00000412272 LPAL2Q16609 132 aa3.6□□□□□ -1.83
HERC4-205ENST00000412272 MUC4Q99102 2169 aa3.6□□□□□ -1.83
HERC4-205ENST00000412272 ASCC3Q8N3C0 2202 aaKnown RBP3.6□□□□□ -1.83
HERC4-205ENST00000412272 LCE6AA0A183 80 aa3.6□□□□□ -1.83
HERC4-205ENST00000412272 S100A4P26447 101 aaKnown RBP3.6□□□□□ -1.83
HERC4-205ENST00000412272 ADM2Q7Z4H4 148 aa3.6□□□□□ -1.83
HERC4-205ENST00000412272 LIMD2Q9BT23 127 aa3.6□□□□□ -1.83
HERC4-205ENST00000412272 PTPRQQ9UMZ3 2332 aa3.6□□□□□ -1.83
HERC4-205ENST00000412272 TRBV10-1A0A0K0K1A3 114 aa3.59□□□□□ -1.83
HERC4-205ENST00000412272 SLPIP03973 132 aa3.59□□□□□ -1.83
HERC4-205ENST00000412272 RPL11P62913 178 aaKnown RBP3.59□□□□□ -1.83
HERC4-205ENST00000412272 LECT2O14960 151 aa3.59□□□□□ -1.83
HERC4-205ENST00000412272 PRSS33Q8NF86 280 aa3.59□□□□□ -1.83
HERC4-205ENST00000412272 X6R8D5 127 aa3.59□□□□□ -1.83
HERC4-205ENST00000412272 LOC101927531A0A1B0GV80 90 aa3.59□□□□□ -1.84
HERC4-205ENST00000412272 ZCCHC13Q8WW36 166 aaKnown RBP3.59□□□□□ -1.84
HERC4-205ENST00000412272 SEC16AO15027 2179 aa3.59□□□□□ -1.84
HERC4-205ENST00000412272 IGHV3-38A0A0C4DH36 116 aa3.59□□□□□ -1.84
HERC4-205ENST00000412272 WDFY4Q6ZS81 3184 aa3.58□□□□□ -1.84
HERC4-205ENST00000412272 C19orf84I3L1E1 186 aa3.58□□□□□ -1.84
HERC4-205ENST00000412272 PLA2G1BP04054 148 aaKnown RBP3.58□□□□□ -1.84
HERC4-205ENST00000412272 PRR15LQ9BU68 103 aa3.58□□□□□ -1.84
HERC4-205ENST00000412272 A6NED7 52 aa3.58□□□□□ -1.84
HERC4-205ENST00000412272 M0R2N4 97 aa3.58□□□□□ -1.84
HERC4-205ENST00000412272 PRB1P04280 392 aa3.58□□□□□ -1.84
HERC4-205ENST00000412272 HAMPP81172 84 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms