RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 LINC00694P0DN24 101 aa10.27□□□□□ -0.77
ATRIP-204ENST00000412052 LINC01620Q4KN68 170 aa10.27□□□□□ -0.77
ATRIP-204ENST00000412052 EDA2RQ9HAV5 297 aa10.26□□□□□ -0.77
ATRIP-204ENST00000412052 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.26□□□□□ -0.77
ATRIP-204ENST00000412052 TINCRA0A1B0GVN0 87 aa10.26□□□□□ -0.77
ATRIP-204ENST00000412052 GEMIN7Q9H840 131 aaKnown RBP10.26□□□□□ -0.77
ATRIP-204ENST00000412052 A0A1B0GV72 72 aa10.25□□□□□ -0.77
ATRIP-204ENST00000412052 MIAQ16674 131 aa10.25□□□□□ -0.77
ATRIP-204ENST00000412052 DEFB114Q30KQ6 69 aa10.25□□□□□ -0.77
ATRIP-204ENST00000412052 ODF3L2Q3SX64 289 aa10.25□□□□□ -0.77
ATRIP-204ENST00000412052 FN1P02751 2386 aaKnown RBP10.24□□□□□ -0.77
ATRIP-204ENST00000412052 SPANXA1Q9NS26 97 aa10.24□□□□□ -0.77
ATRIP-204ENST00000412052 ICOSQ9Y6W8 199 aa10.24□□□□□ -0.77
ATRIP-204ENST00000412052 BBC3Q96PG8 261 aaPredicted RBP10.24□□□□□ -0.77
ATRIP-204ENST00000412052 TRGV1A0A0A0MS02 117 aa10.23□□□□□ -0.77
ATRIP-204ENST00000412052 CIDEAO60543 219 aa10.23□□□□□ -0.77
ATRIP-204ENST00000412052 ATXN8Q156A1 80 aa10.23□□□□□ -0.77
ATRIP-204ENST00000412052 TMEM101Q96IK0 257 aa10.23□□□□□ -0.77
ATRIP-204ENST00000412052 INSP01308 110 aa10.23□□□□□ -0.77
ATRIP-204ENST00000412052 ZFAND6Q6FIF0 208 aa10.22□□□□□ -0.77
ATRIP-204ENST00000412052 C4orf3Q8WVX3 66 aa10.22□□□□□ -0.77
ATRIP-204ENST00000412052 PEMTQ9UBM1 199 aa10.22□□□□□ -0.77
ATRIP-204ENST00000412052 CRLF1O75462 422 aa10.22□□□□□ -0.77
ATRIP-204ENST00000412052 C1orf158Q8N1D5 194 aa10.22□□□□□ -0.77
ATRIP-204ENST00000412052 SPANXDQ9BXN6 97 aa10.22□□□□□ -0.77
ATRIP-204ENST00000412052 SPANXCQ9NY87 97 aa10.22□□□□□ -0.77
ATRIP-204ENST00000412052 TRBV30A0A0K0K1B3 111 aa10.21□□□□□ -0.77
ATRIP-204ENST00000412052 RPL13AP40429 203 aaKnown RBP10.21□□□□□ -0.77
ATRIP-204ENST00000412052 DGAT2L7PQ6IED9 249 aa10.21□□□□□ -0.77
ATRIP-204ENST00000412052 Q6ZTI0 123 aa10.21□□□□□ -0.77
ATRIP-204ENST00000412052 Q96MF0 132 aa10.21□□□□□ -0.77
ATRIP-204ENST00000412052 TRAV13-1A0A0B4J241 112 aa10.21□□□□□ -0.78
ATRIP-204ENST00000412052 RS1O15537 224 aa10.21□□□□□ -0.78
ATRIP-204ENST00000412052 TRAV26-1A0A087WT03 109 aa10.2□□□□□ -0.78
ATRIP-204ENST00000412052 BEAN1Q3B7T3 259 aa10.2□□□□□ -0.78
ATRIP-204ENST00000412052 WFDC10AQ9H1F0 79 aa10.2□□□□□ -0.78
ATRIP-204ENST00000412052 H7C423 109 aa10.2□□□□□ -0.78
ATRIP-204ENST00000412052 Q9H8V8 135 aa10.2□□□□□ -0.78
ATRIP-204ENST00000412052 LINC00242Q5T6M2 205 aa10.2□□□□□ -0.78
ATRIP-204ENST00000412052 NTM-AS1Q6ZSK4 140 aa10.2□□□□□ -0.78
ATRIP-204ENST00000412052 Q8N2B8 174 aa10.2□□□□□ -0.78
ATRIP-204ENST00000412052 PLA2G2AP14555 144 aa10.19□□□□□ -0.78
ATRIP-204ENST00000412052 CLUHP3Q96NS8 147 aa10.19□□□□□ -0.78
ATRIP-204ENST00000412052 TRBV10-2A0A0K0K1G8 114 aa10.19□□□□□ -0.78
ATRIP-204ENST00000412052 TRAV4A0A0B4J268 109 aa10.18□□□□□ -0.78
ATRIP-204ENST00000412052 C2orf82Q6UX34 121 aa10.18□□□□□ -0.78
ATRIP-204ENST00000412052 CITED2Q99967 270 aaPredicted RBP10.18□□□□□ -0.78
ATRIP-204ENST00000412052 NBEAL2Q6ZNJ1 2754 aa10.18□□□□□ -0.78
ATRIP-204ENST00000412052 GAGE12JA6NER3 117 aa10.18□□□□□ -0.78
ATRIP-204ENST00000412052 GAGE4Q13068 117 aa10.18□□□□□ -0.78
ATRIP-204ENST00000412052 GAGE5Q13069 117 aa10.18□□□□□ -0.78
ATRIP-204ENST00000412052 SOSTDC1Q6X4U4 206 aa10.18□□□□□ -0.78
ATRIP-204ENST00000412052 RNF183Q96D59 192 aa10.18□□□□□ -0.78
ATRIP-204ENST00000412052 GCN1Q92616 2671 aaKnown RBP10.17□□□□□ -0.78
ATRIP-204ENST00000412052 STHQ8IWL8 128 aa10.17□□□□□ -0.78
ATRIP-204ENST00000412052 LOC100131303A0A0U1RQF7 123 aa10.17□□□□□ -0.78
ATRIP-204ENST00000412052 IGLV5-45A0A087WSX0 123 aa10.16□□□□□ -0.78
ATRIP-204ENST00000412052 NDUFA1O15239 70 aa10.16□□□□□ -0.78
ATRIP-204ENST00000412052 DNAJC30Q96LL9 226 aa10.16□□□□□ -0.78
ATRIP-204ENST00000412052 DEFB113Q30KQ7 82 aa10.16□□□□□ -0.78
ATRIP-204ENST00000412052 PIK3CD-AS1Q5SR53 167 aa10.16□□□□□ -0.78
ATRIP-204ENST00000412052 UBE2WQ96B02 151 aa10.16□□□□□ -0.78
ATRIP-204ENST00000412052 SMIM1B2RUZ4 78 aa10.15□□□□□ -0.78
ATRIP-204ENST00000412052 LINC00308Q8TCZ7 52 aa10.15□□□□□ -0.78
ATRIP-204ENST00000412052 CITED1Q99966 193 aa10.15□□□□□ -0.78
ATRIP-204ENST00000412052 NOP10Q9NPE3 64 aaKnown RBP10.15□□□□□ -0.78
ATRIP-204ENST00000412052 TIRAPP58753 221 aa10.14□□□□□ -0.79
ATRIP-204ENST00000412052 KRTAP1-3Q8IUG1 177 aa10.14□□□□□ -0.79
ATRIP-204ENST00000412052 TENM4Q6N022 2769 aa10.14□□□□□ -0.79
ATRIP-204ENST00000412052 M0QXV9 152 aa10.14□□□□□ -0.79
ATRIP-204ENST00000412052 IL17DQ8TAD2 202 aa10.14□□□□□ -0.79
ATRIP-204ENST00000412052 ESM1Q9NQ30 184 aa10.14□□□□□ -0.79
ATRIP-204ENST00000412052 ITPR2Q14571 2701 aa10.14□□□□□ -0.79
ATRIP-204ENST00000412052 IGKV3OR2-268A0A0C4DH90 116 aa10.13□□□□□ -0.79
ATRIP-204ENST00000412052 IGLV5-39A0A0G2JS06 123 aa10.13□□□□□ -0.79
ATRIP-204ENST00000412052 TMEM262E9PQX1 116 aa10.13□□□□□ -0.79
ATRIP-204ENST00000412052 LST1O00453 97 aa10.13□□□□□ -0.79
ATRIP-204ENST00000412052 HIST2H2BCQ6DN03 193 aa10.13□□□□□ -0.79
ATRIP-204ENST00000412052 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
ATRIP-204ENST00000412052 K7EQD1 137 aa10.13□□□□□ -0.79
ATRIP-204ENST00000412052 DNAJC9-AS1A6NH13 148 aa10.13□□□□□ -0.79
ATRIP-204ENST00000412052 TTC32Q5I0X7 151 aa10.13□□□□□ -0.79
ATRIP-204ENST00000412052 GIG44P09565 113 aaPredicted RBP10.12□□□□□ -0.79
ATRIP-204ENST00000412052 COX6CP09669 75 aa10.12□□□□□ -0.79
ATRIP-204ENST00000412052 WFDC11Q8NEX6 87 aa10.12□□□□□ -0.79
ATRIP-204ENST00000412052 YAE1D1Q9NRH1 226 aa10.12□□□□□ -0.79
ATRIP-204ENST00000412052 CCL24O00175 119 aa10.12□□□□□ -0.79
ATRIP-204ENST00000412052 RPL35AP18077 110 aaKnown RBP10.12□□□□□ -0.79
ATRIP-204ENST00000412052 HERVK_113P63121 156 aa10.12□□□□□ -0.79
ATRIP-204ENST00000412052 RPL36AP83881 106 aaKnown RBP10.12□□□□□ -0.79
ATRIP-204ENST00000412052 MEIG1Q5JSS6 88 aa10.12□□□□□ -0.79
ATRIP-204ENST00000412052 PRIMA1Q86XR5 153 aa10.12□□□□□ -0.79
ATRIP-204ENST00000412052 TEX29Q8N6K0 151 aa10.12□□□□□ -0.79
ATRIP-204ENST00000412052 RPL36ALQ969Q0 106 aaKnown RBP10.12□□□□□ -0.79
ATRIP-204ENST00000412052 ANAPC13Q9BS18 74 aa10.12□□□□□ -0.79
ATRIP-204ENST00000412052 TIMM17BO60830 172 aa10.11□□□□□ -0.79
ATRIP-204ENST00000412052 GAGE7O76087 117 aa10.11□□□□□ -0.79
ATRIP-204ENST00000412052 GAGE12FP0CL80 117 aa10.11□□□□□ -0.79
ATRIP-204ENST00000412052 GAGE12GP0CL81 117 aa10.11□□□□□ -0.79
ATRIP-204ENST00000412052 GAGE12IP0CL82 117 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms