RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 XIRP2A4UGR9 3374 aa1.59□□□□□ -2.16
HMGB3P2-201ENST00000411913 UTRNP46939 3433 aa1.59□□□□□ -2.16
HMGB3P2-201ENST00000411913 KNTC1P50748 2209 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 TRAV26-2A0A0B4J265 109 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 IGHV1-18A0A0C4DH31 117 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 TRBV6-5A0A0K0K1A5 114 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 TRBV10-3A0A0K0K1G6 114 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 PINLYPA6NC86 204 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 H7BZZ5 65 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 PANO1I0J062 215 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 K7EIM0 57 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 COX7A2LO14548 114 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 ZNF861PO60384 105 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 PPP1R17O96001 155 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 COX6CP09669 75 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 LOXP28300 417 aaPredicted RBP1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 KLKP1Q107X0 134 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 MIAQ16674 131 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 C10orf55Q5SWW7 151 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 C1orf195Q5TG92 126 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 CAMK2N1Q7Z7J9 78 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 C10orf105Q8TEF2 133 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 CLEC2BQ92478 149 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 RNASE6Q93091 150 aaKnown RBP1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 LEAP2Q969E1 77 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 FAM104AQ969W3 186 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 EEF1AKMT3Q96AZ1 226 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 CCL13Q99616 98 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 FBN3Q75N90 2809 aa1.58□□□□□ -2.16
HMGB3P2-201ENST00000411913 ANKRD17O75179 2603 aaKnown RBP1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 USP34Q70CQ2 3546 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 MED12Q93074 2177 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 TNCP24821 2201 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 IGKV2-40A0A087WW87 121 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 IGHV5-10-1A0A0J9YXX1 117 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 TRBV27A0A0K0K1C4 114 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 FAM236DA0A1B0GTK5 79 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 FAM223BA6NKX1 122 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 IBA57-AS1B1ANH7 110 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 IGKV2D-40P01614 121 aaPredicted RBP1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 IGHG2P01859 326 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 INAFM2P0DMQ5 153 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 FAM236CP0DP71 79 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 LGALS3P17931 250 aaKnown RBP1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 NBL1P41271 181 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 RPL27AP46776 148 aaKnown RBP1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 XCL1P47992 114 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 SYNJ2BPP57105 145 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 NPC2P61916 151 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 VMA21Q3ZAQ7 101 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 IGFL2Q6UWQ7 119 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 Q6ZRU5 148 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 DAZ4Q86SG3 579 aaKnown RBP1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 DYNAPQ8N1N2 210 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 Q8N2B8 174 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 GAFA1Q96PS6 74 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 DAZ1Q9NQZ3 744 aaKnown RBP1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 LENEPQ9Y5L5 61 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 EPG5Q9HCE0 2579 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 CHD7Q9P2D1 2997 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 RANBP2P49792 3224 aaKnown RBP1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 SEC16AO15027 2179 aa1.57□□□□□ -2.16
HMGB3P2-201ENST00000411913 CABIN1Q9Y6J0 2220 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 IGLV3-9A0A075B6K5 115 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 TRAV8-3A0A0A6YYJ7 113 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 TRBV7-6A0A0J9YX20 115 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 IGHV3-64DA0A0J9YX35 117 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 BAALC-AS2P0C853 105 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 IGHV3-30-3P0DP02 117 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 RNASE4P34096 147 aaKnown RBP1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 RPL28P46779 137 aaKnown RBP1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 ATP5EP56381 51 aaPredicted RBP1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 REG3AQ06141 175 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 DEFB133Q30KQ1 61 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 ATP5EP2Q5VTU8 51 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 HCP5Q6MZN7 132 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 PRR15Q8IV56 129 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 FAM223AQ8IWN6 122 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 RNF182Q8N6D2 247 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 Q8TAT8 98 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 RPL39LQ96EH5 51 aaKnown RBP1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 RNF5Q99942 180 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 LINC00846Q9NV44 126 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 ZNRD1Q9P1U0 126 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 PKIGQ9Y2B9 76 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 CACNA1DQ01668 2161 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 DIDO1Q9BTC0 2240 aaKnown RBP1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 DOPEY1Q5JWR5 2465 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 DNAH14Q0VDD8 3507 aa1.56□□□□□ -2.16
HMGB3P2-201ENST00000411913 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
HMGB3P2-201ENST00000411913 UBR4Q5T4S7 5183 aa1.55□□□□□ -2.16
HMGB3P2-201ENST00000411913 ANKRD11Q6UB99 2663 aaPredicted RBP1.55□□□□□ -2.16
HMGB3P2-201ENST00000411913 WDR87Q6ZQQ6 2873 aa1.55□□□□□ -2.16
HMGB3P2-201ENST00000411913 NAV3Q8IVL0 2385 aa1.55□□□□□ -2.16
HMGB3P2-201ENST00000411913 COL6A3P12111 3177 aa1.55□□□□□ -2.16
HMGB3P2-201ENST00000411913 IGLV11-55A0A075B6I3 123 aa1.55□□□□□ -2.16
HMGB3P2-201ENST00000411913 TRAV7A0A075B6U4 112 aa1.55□□□□□ -2.16
HMGB3P2-201ENST00000411913 A0A087WVE0 104 aa1.55□□□□□ -2.16
HMGB3P2-201ENST00000411913 IGHV3-21A0A0B4J1V1 117 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms