RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 Q6ZN92 141 aa12.7□□□□□ -0.38
CDC42-204ENST00000411827 HSPB8Q9UJY1 196 aa12.7□□□□□ -0.38
CDC42-204ENST00000411827 IGIPA6NJ69 53 aa12.69□□□□□ -0.38
CDC42-204ENST00000411827 CCL25O15444 150 aa12.69□□□□□ -0.38
CDC42-204ENST00000411827 PLECQ15149 4684 aaKnown RBP12.69□□□□□ -0.38
CDC42-204ENST00000411827 PDZD11Q5EBL8 140 aa12.69□□□□□ -0.38
CDC42-204ENST00000411827 ZNF664Q8N3J9 261 aa12.69□□□□□ -0.38
CDC42-204ENST00000411827 CSMD3Q7Z407 3707 aa12.68□□□□□ -0.38
CDC42-204ENST00000411827 A0A096LNJ9 63 aa12.68□□□□□ -0.38
CDC42-204ENST00000411827 LY6G6CO95867 125 aa12.68□□□□□ -0.38
CDC42-204ENST00000411827 CDC42SE2Q9NRR3 84 aa12.68□□□□□ -0.38
CDC42-204ENST00000411827 LEPROTL1O95214 131 aa12.67□□□□□ -0.38
CDC42-204ENST00000411827 ANGP03950 147 aaKnown RBP12.67□□□□□ -0.38
CDC42-204ENST00000411827 LYSTQ99698 3801 aa12.67□□□□□ -0.38
CDC42-204ENST00000411827 TRAV8-3A0A0A6YYJ7 113 aa12.66□□□□□ -0.38
CDC42-204ENST00000411827 IBA57-AS1B1ANH7 110 aa12.66□□□□□ -0.38
CDC42-204ENST00000411827 IGHV3-30P01768 117 aa12.66□□□□□ -0.38
CDC42-204ENST00000411827 IGHV3-33P01772 117 aa12.66□□□□□ -0.38
CDC42-204ENST00000411827 IGHV3-30-3P0DP02 117 aa12.66□□□□□ -0.38
CDC42-204ENST00000411827 IGHV3-30-5P0DP03 117 aa12.66□□□□□ -0.38
CDC42-204ENST00000411827 Q8N976 141 aa12.66□□□□□ -0.38
CDC42-204ENST00000411827 VCX2Q9H322 139 aa12.66□□□□□ -0.38
CDC42-204ENST00000411827 NUPR1O60356 82 aa12.65□□□□□ -0.38
CDC42-204ENST00000411827 S100A2P29034 98 aa12.65□□□□□ -0.38
CDC42-204ENST00000411827 PMCHL1Q16048 86 aa12.65□□□□□ -0.38
CDC42-204ENST00000411827 FAM19A2Q8N3H0 131 aa12.65□□□□□ -0.38
CDC42-204ENST00000411827 C2orf88Q9BSF0 95 aa12.65□□□□□ -0.38
CDC42-204ENST00000411827 PRR34Q9NV39 138 aa12.65□□□□□ -0.38
CDC42-204ENST00000411827 IGLV4-60A0A075B6I1 120 aa12.64□□□□□ -0.39
CDC42-204ENST00000411827 IGLV4-3A0A075B6K6 122 aa12.64□□□□□ -0.39
CDC42-204ENST00000411827 TRAV8-4A0A0B4J246 113 aa12.64□□□□□ -0.39
CDC42-204ENST00000411827 NBDYA0A0U1RRE5 68 aa12.64□□□□□ -0.39
CDC42-204ENST00000411827 CRPP02741 224 aa12.64□□□□□ -0.39
CDC42-204ENST00000411827 MIAQ16674 131 aa12.64□□□□□ -0.39
CDC42-204ENST00000411827 TEX43Q6ZNM6 134 aa12.64□□□□□ -0.39
CDC42-204ENST00000411827 KLK12Q9UKR0 248 aa12.64□□□□□ -0.39
CDC42-204ENST00000411827 EPPK1P58107 5090 aaKnown RBP12.64□□□□□ -0.39
CDC42-204ENST00000411827 HYDINQ4G0P3 5121 aa12.64□□□□□ -0.39
CDC42-204ENST00000411827 C5orf52A6NGY3 159 aa12.63□□□□□ -0.39
CDC42-204ENST00000411827 IFI27L1Q96BM0 104 aa12.63□□□□□ -0.39
CDC42-204ENST00000411827 RMI2Q96E14 147 aa12.63□□□□□ -0.39
CDC42-204ENST00000411827 LCE6AA0A183 80 aa12.62□□□□□ -0.39
CDC42-204ENST00000411827 REG3AQ06141 175 aa12.62□□□□□ -0.39
CDC42-204ENST00000411827 NFE4Q86UQ8 179 aa12.62□□□□□ -0.39
CDC42-204ENST00000411827 LINC00269Q8N2A0 174 aa12.62□□□□□ -0.39
CDC42-204ENST00000411827 AMELXQ99217 191 aa12.62□□□□□ -0.39
CDC42-204ENST00000411827 COX11Q9Y6N1 276 aa12.62□□□□□ -0.39
CDC42-204ENST00000411827 SEC11AP67812 179 aa12.61□□□□□ -0.39
CDC42-204ENST00000411827 PMVKQ15126 192 aa12.61□□□□□ -0.39
CDC42-204ENST00000411827 Q6ZUT4 128 aa12.61□□□□□ -0.39
CDC42-204ENST00000411827 SNRPEP62304 92 aaKnown RBP12.6□□□□□ -0.39
CDC42-204ENST00000411827 SS18Q15532 418 aa12.6□□□□□ -0.39
CDC42-204ENST00000411827 HIST3H2BBQ8N257 126 aa12.6□□□□□ -0.39
CDC42-204ENST00000411827 MAP1LC3CQ9BXW4 147 aa12.6□□□□□ -0.39
CDC42-204ENST00000411827 IFITM10A6NMD0 228 aa12.59□□□□□ -0.39
CDC42-204ENST00000411827 PRSS1P07477 247 aa12.59□□□□□ -0.39
CDC42-204ENST00000411827 UBE2WQ96B02 151 aa12.59□□□□□ -0.39
CDC42-204ENST00000411827 TM2D2Q9BX73 214 aa12.59□□□□□ -0.39
CDC42-204ENST00000411827 TRAV12-1A0A0B4J245 112 aa12.58□□□□□ -0.4
CDC42-204ENST00000411827 FABP4P15090 132 aa12.58□□□□□ -0.4
CDC42-204ENST00000411827 Q6ZR54 194 aa12.58□□□□□ -0.4
CDC42-204ENST00000411827 Q8N3U1 123 aa12.58□□□□□ -0.4
CDC42-204ENST00000411827 BAALCQ8WXS3 180 aa12.58□□□□□ -0.4
CDC42-204ENST00000411827 FAM104AQ969W3 186 aa12.58□□□□□ -0.4
CDC42-204ENST00000411827 CST9LQ9H4G1 147 aa12.58□□□□□ -0.4
CDC42-204ENST00000411827 LINC00959A0A1B0GUT2 108 aa12.57□□□□□ -0.4
CDC42-204ENST00000411827 AKR1D1P51857 326 aa12.57□□□□□ -0.4
CDC42-204ENST00000411827 ENHOQ6UWT2 76 aa12.57□□□□□ -0.4
CDC42-204ENST00000411827 SPATA12Q7Z6I5 190 aa12.57□□□□□ -0.4
CDC42-204ENST00000411827 OPRPNQ99935 248 aaPredicted RBP12.57□□□□□ -0.4
CDC42-204ENST00000411827 TMA7Q9Y2S6 64 aaKnown RBP12.57□□□□□ -0.4
CDC42-204ENST00000411827 C1orf43Q9BWL3 253 aa12.56□□□□□ -0.4
CDC42-204ENST00000411827 LINC00173Q6ZV60 143 aa12.55□□□□□ -0.4
CDC42-204ENST00000411827 FAM19A3Q7Z5A8 133 aa12.55□□□□□ -0.4
CDC42-204ENST00000411827 HIST1H2BLQ99880 126 aa12.55□□□□□ -0.4
CDC42-204ENST00000411827 PRSS29PA6NIE9 313 aa12.54□□□□□ -0.4
CDC42-204ENST00000411827 UBE2D1P51668 147 aa12.54□□□□□ -0.4
CDC42-204ENST00000411827 BIRC6Q9NR09 4857 aa12.54□□□□□ -0.4
CDC42-204ENST00000411827 TRAV13-1A0A0B4J241 112 aa12.53□□□□□ -0.4
CDC42-204ENST00000411827 PET117Q6UWS5 81 aa12.53□□□□□ -0.4
CDC42-204ENST00000411827 HERVK_113P63121 156 aa12.52□□□□□ -0.41
CDC42-204ENST00000411827 RNASE13Q5GAN3 156 aaKnown RBP12.52□□□□□ -0.41
CDC42-204ENST00000411827 CD164L2Q6UWJ8 174 aa12.52□□□□□ -0.41
CDC42-204ENST00000411827 KRTAP1-5Q9BYS1 174 aa12.52□□□□□ -0.41
CDC42-204ENST00000411827 IGKV3OR2-268A0A0C4DH90 116 aa12.51□□□□□ -0.41
CDC42-204ENST00000411827 TINCRA0A1B0GVN0 87 aa12.51□□□□□ -0.41
CDC42-204ENST00000411827 SYS1-DBNDD2H3BUS1 97 aa12.51□□□□□ -0.41
CDC42-204ENST00000411827 C1orf134Q5TEV5 83 aa12.51□□□□□ -0.41
CDC42-204ENST00000411827 CLPSL2Q6UWE3 100 aa12.51□□□□□ -0.41
CDC42-204ENST00000411827 C6orf223Q8N319 242 aa12.51□□□□□ -0.41
CDC42-204ENST00000411827 CHCHD10Q8WYQ3 142 aaPredicted RBP12.51□□□□□ -0.41
CDC42-204ENST00000411827 GEMIN7Q9H840 131 aaKnown RBP12.51□□□□□ -0.41
CDC42-204ENST00000411827 Q9HAA7 133 aa12.51□□□□□ -0.41
CDC42-204ENST00000411827 IGKV2D-24A0A075B6R9 120 aa12.5□□□□□ -0.41
CDC42-204ENST00000411827 C20orf202A1L168 122 aa12.5□□□□□ -0.41
CDC42-204ENST00000411827 F8VRH5 84 aa12.5□□□□□ -0.41
CDC42-204ENST00000411827 CHTOPQ9Y3Y2 248 aaKnown RBP12.5□□□□□ -0.41
CDC42-204ENST00000411827 M0R2N4 97 aa12.49□□□□□ -0.41
CDC42-204ENST00000411827 PLNP26678 52 aa12.49□□□□□ -0.41
CDC42-204ENST00000411827 LINC00242Q5T6M2 205 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms