RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 A0A087WSZ3 146 aa3.38□□□□□ -1.87
PTPN13-202ENST00000411767 TNRC6CQ9HCJ0 1690 aaKnown RBP3.38□□□□□ -1.87
PTPN13-202ENST00000411767 MRGPRG-AS1Q2M3A8 158 aa3.38□□□□□ -1.87
PTPN13-202ENST00000411767 Q6ZQT0 140 aa3.38□□□□□ -1.87
PTPN13-202ENST00000411767 PRSS33Q8NF86 280 aa3.38□□□□□ -1.87
PTPN13-202ENST00000411767 TM2D3Q9BRN9 247 aa3.38□□□□□ -1.87
PTPN13-202ENST00000411767 NRXN2Q9P2S2 1712 aa3.37□□□□□ -1.87
PTPN13-202ENST00000411767 FAM229AH3BQW9 127 aa3.37□□□□□ -1.87
PTPN13-202ENST00000411767 PATE3B3GLJ2 98 aa3.37□□□□□ -1.87
PTPN13-202ENST00000411767 SMIM10L1P0DMW3 83 aa3.37□□□□□ -1.87
PTPN13-202ENST00000411767 RPL37AP61513 92 aaKnown RBP3.37□□□□□ -1.87
PTPN13-202ENST00000411767 SMIM10Q96HG1 83 aa3.37□□□□□ -1.87
PTPN13-202ENST00000411767 LINC01556Q5JQF7 62 aa3.37□□□□□ -1.87
PTPN13-202ENST00000411767 RBM12B-AS1Q9P1G2 102 aa3.37□□□□□ -1.87
PTPN13-202ENST00000411767 PRAC2D3DTV9 90 aa3.37□□□□□ -1.87
PTPN13-202ENST00000411767 TFF2Q03403 129 aa3.37□□□□□ -1.87
PTPN13-202ENST00000411767 RSPO1Q2MKA7 263 aaPredicted RBP3.37□□□□□ -1.87
PTPN13-202ENST00000411767 PRR9Q5T870 116 aa3.37□□□□□ -1.87
PTPN13-202ENST00000411767 RGPD3A6NKT7 1758 aaPredicted RBP3.36□□□□□ -1.87
PTPN13-202ENST00000411767 RGPD4Q7Z3J3 1758 aa3.36□□□□□ -1.87
PTPN13-202ENST00000411767 C2orf91Q6ZV80 131 aa3.36□□□□□ -1.87
PTPN13-202ENST00000411767 QSER1Q2KHR3 1735 aa3.36□□□□□ -1.87
PTPN13-202ENST00000411767 ZNF80P51504 273 aaPredicted RBP3.36□□□□□ -1.87
PTPN13-202ENST00000411767 MOBPQ13875 183 aa3.36□□□□□ -1.87
PTPN13-202ENST00000411767 PLA2G5P39877 138 aa3.36□□□□□ -1.87
PTPN13-202ENST00000411767 BRWD3Q6RI45 1802 aa3.36□□□□□ -1.87
PTPN13-202ENST00000411767 LINC01465Q8N7H1 131 aa3.36□□□□□ -1.87
PTPN13-202ENST00000411767 HRES1P13985 223 aa3.36□□□□□ -1.87
PTPN13-202ENST00000411767 SPRR3Q9UBC9 169 aa3.36□□□□□ -1.87
PTPN13-202ENST00000411767 A0A087WYN8 130 aa3.36□□□□□ -1.87
PTPN13-202ENST00000411767 GREB1LQ9C091 1923 aaPredicted RBP3.36□□□□□ -1.87
PTPN13-202ENST00000411767 LYPD2Q6UXB3 125 aa3.36□□□□□ -1.87
PTPN13-202ENST00000411767 IGKV1-8A0A0C4DH67 115 aa3.35□□□□□ -1.87
PTPN13-202ENST00000411767 KPRPQ5T749 579 aaPredicted RBP3.35□□□□□ -1.87
PTPN13-202ENST00000411767 C1orf147Q96MC9 270 aaPredicted RBP3.35□□□□□ -1.87
PTPN13-202ENST00000411767 MSRB1Q9NZV6 116 aa3.35□□□□□ -1.87
PTPN13-202ENST00000411767 U3KQK5 164 aa3.35□□□□□ -1.87
PTPN13-202ENST00000411767 PSME4Q14997 1843 aa3.35□□□□□ -1.87
PTPN13-202ENST00000411767 FAM167A-AS1Q96KT0 104 aa3.35□□□□□ -1.87
PTPN13-202ENST00000411767 ABCA4P78363 2273 aa3.35□□□□□ -1.87
PTPN13-202ENST00000411767 NUPR1O60356 82 aa3.35□□□□□ -1.87
PTPN13-202ENST00000411767 PHIPQ8WWQ0 1821 aa3.35□□□□□ -1.87
PTPN13-202ENST00000411767 COX6A2Q02221 97 aa3.35□□□□□ -1.87
PTPN13-202ENST00000411767 PHF3Q92576 2039 aaKnown RBP3.35□□□□□ -1.87
PTPN13-202ENST00000411767 SEC61BP60468 96 aaKnown RBP3.34□□□□□ -1.87
PTPN13-202ENST00000411767 POLEQ07864 2286 aa3.34□□□□□ -1.87
PTPN13-202ENST00000411767 C4orf26Q17RF5 130 aa3.34□□□□□ -1.87
PTPN13-202ENST00000411767 SMIM29Q86T20 159 aa3.34□□□□□ -1.87
PTPN13-202ENST00000411767 SVILO95425 2214 aa3.34□□□□□ -1.87
PTPN13-202ENST00000411767 LOC285556D6RIA3 1793 aa3.34□□□□□ -1.87
PTPN13-202ENST00000411767 DEFB4AO15263 64 aa3.34□□□□□ -1.87
PTPN13-202ENST00000411767 ZNF407Q9C0G0 2248 aa3.34□□□□□ -1.87
PTPN13-202ENST00000411767 GREB1Q4ZG55 1949 aa3.34□□□□□ -1.88
PTPN13-202ENST00000411767 EML6Q6ZMW3 1958 aa3.34□□□□□ -1.88
PTPN13-202ENST00000411767 DAZAP2Q15038 168 aaPredicted RBP3.34□□□□□ -1.88
PTPN13-202ENST00000411767 Q9UF83 564 aa3.34□□□□□ -1.88
PTPN13-202ENST00000411767 WT1-ASQ06250 92 aa3.34□□□□□ -1.88
PTPN13-202ENST00000411767 LINC00114Q6XXX2 140 aa3.34□□□□□ -1.88
PTPN13-202ENST00000411767 BRWD1Q9NSI6 2320 aa3.34□□□□□ -1.88
PTPN13-202ENST00000411767 EP400Q96L91 3159 aa3.34□□□□□ -1.88
PTPN13-202ENST00000411767 SLURP2P0DP57 97 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 SHISA4Q96DD7 197 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 Q6YL49 198 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 C17orf58Q2M2W7 97 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 COA5Q86WW8 74 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 ABCA1O95477 2261 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 PRRC2AP48634 2157 aaKnown RBP3.33□□□□□ -1.88
PTPN13-202ENST00000411767 SPTBN1Q01082 2364 aaKnown RBP3.33□□□□□ -1.88
PTPN13-202ENST00000411767 ARFGEF1Q9Y6D6 1849 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 J3QL48 77 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 SPACA4Q8TDM5 124 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 SDK1Q7Z5N4 2213 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 DOPEY2Q9Y3R5 2298 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 ALPK2Q86TB3 2170 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 M0R2N4 97 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 TLX1NBP0CAT3 122 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 FAM215AQ9Y5M1 114 aa3.33□□□□□ -1.88
PTPN13-202ENST00000411767 MYOFQ9NZM1 2061 aa3.32□□□□□ -1.88
PTPN13-202ENST00000411767 CADP27708 2225 aa3.32□□□□□ -1.88
PTPN13-202ENST00000411767 PDCD11Q14690 1871 aaKnown RBP3.32□□□□□ -1.88
PTPN13-202ENST00000411767 CSRP3P50461 194 aa3.32□□□□□ -1.88
PTPN13-202ENST00000411767 DYSFO75923 2080 aa3.32□□□□□ -1.88
PTPN13-202ENST00000411767 IGLV2-18A0A075B6J9 118 aa3.32□□□□□ -1.88
PTPN13-202ENST00000411767 IGLV5-39A0A0G2JS06 123 aa3.32□□□□□ -1.88
PTPN13-202ENST00000411767 ATAD5Q96QE3 1844 aa3.32□□□□□ -1.88
PTPN13-202ENST00000411767 LINC00959A0A1B0GUT2 108 aa3.32□□□□□ -1.88
PTPN13-202ENST00000411767 LINC01561Q8N1V8 128 aa3.32□□□□□ -1.88
PTPN13-202ENST00000411767 COX8CQ7Z4L0 72 aa3.32□□□□□ -1.88
PTPN13-202ENST00000411767 COL11A2P13942 1736 aaPredicted RBP3.32□□□□□ -1.88
PTPN13-202ENST00000411767 K7EIM0 57 aa3.32□□□□□ -1.88
PTPN13-202ENST00000411767 C11orf72Q8NBR9 251 aa3.32□□□□□ -1.88
PTPN13-202ENST00000411767 PIP4P1Q86T03 277 aa3.31□□□□□ -1.88
PTPN13-202ENST00000411767 SIPA1L1O43166 1804 aa3.31□□□□□ -1.88
PTPN13-202ENST00000411767 KRTAP16-1A8MUX0 517 aa3.31□□□□□ -1.88
PTPN13-202ENST00000411767 TNS1Q9HBL0 1735 aaKnown RBP3.31□□□□□ -1.88
PTPN13-202ENST00000411767 A0A1B0GUV1 79 aa3.31□□□□□ -1.88
PTPN13-202ENST00000411767 PRO0461Q9UI25 63 aa3.31□□□□□ -1.88
PTPN13-202ENST00000411767 THADAQ6YHU6 1953 aa3.31□□□□□ -1.88
PTPN13-202ENST00000411767 H7BZZ5 65 aa3.31□□□□□ -1.88
PTPN13-202ENST00000411767 Q8N7P7 452 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms