RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SPTBN1Q01082 2364 aaKnown RBP3.63□□□□□ -1.83
SCN3A-203ENST00000409101 CDKN2A-AS1Q9UH64 79 aa3.63□□□□□ -1.83
SCN3A-203ENST00000409101 MED13Q9UHV7 2174 aa3.63□□□□□ -1.83
SCN3A-203ENST00000409101 ARHGAP21Q5T5U3 1957 aa3.63□□□□□ -1.83
SCN3A-203ENST00000409101 M0QXV9 152 aa3.63□□□□□ -1.83
SCN3A-203ENST00000409101 TSHBP01222 138 aa3.63□□□□□ -1.83
SCN3A-203ENST00000409101 IGLV2-11P01706 119 aa3.63□□□□□ -1.83
SCN3A-203ENST00000409101 MUC7Q8TAX7 377 aa3.63□□□□□ -1.83
SCN3A-203ENST00000409101 TMEM223A0PJW6 202 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 A0A0J9YXY3 114 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 TRBV6-5A0A0K0K1A5 114 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 PDE6GP18545 87 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 FHL2Q14192 279 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 C1orf158Q8N1D5 194 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 NTN5Q8WTR8 489 aaPredicted RBP3.62□□□□□ -1.83
SCN3A-203ENST00000409101 AKAP6Q13023 2319 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 OTOGLQ3ZCN5 2332 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 USP17L23D6RBM5 183 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 CRIP1P50238 77 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 UPK3BQ9BT76 320 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 PYGO1Q9Y3Y4 419 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 PCNX3Q9H6A9 2034 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 TNRC6BQ9UPQ9 1833 aaKnown RBP3.62□□□□□ -1.83
SCN3A-203ENST00000409101 IGKV4-1P06312 121 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 UBE2V1Q13404 147 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 MLST8Q9BVC4 326 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 SS18L2Q9UHA2 77 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 C1orf137Q5JT78 98 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 LYPD5Q6UWN5 251 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 FAM208BQ5VWN6 2430 aa3.62□□□□□ -1.83
SCN3A-203ENST00000409101 A0A1B0GXF2 115 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 ACYP1P07311 99 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 SPATA3Q8NHX4 192 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 TRBV30A0A0K0K1B3 111 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 MRPS36P82909 103 aaKnown RBP3.61□□□□□ -1.83
SCN3A-203ENST00000409101 COX17Q14061 63 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 SBSPONQ8IVN8 264 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 CLEC2BQ92478 149 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 CREBBPQ92793 2442 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 TRBV27A0A0K0K1C4 114 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 FAM229AH3BQW9 127 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 TCL1BO95988 128 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 ZNF22P17026 224 aaPredicted RBP3.61□□□□□ -1.83
SCN3A-203ENST00000409101 ANKRD39Q53RE8 183 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 SPINK6Q6UWN8 80 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 H3BMG7 143 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 BEAN1Q3B7T3 259 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 LINC01556Q5JQF7 62 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 RNF185Q96GF1 192 aa3.61□□□□□ -1.83
SCN3A-203ENST00000409101 ROS1P08922 2347 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 F8WDY8 70 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 SEC61GP60059 68 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 CASC2Q6XLA1 102 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 RNASE8Q8TDE3 154 aaKnown RBP3.6□□□□□ -1.83
SCN3A-203ENST00000409101 C14orf132Q9NPU4 83 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 EP400Q96L91 3159 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 C6orf223Q8N319 242 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 C11orf21Q9P2W6 132 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 A0A0B4J2C4 111 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 HIGD1BQ9P298 99 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 RAI1Q7Z5J4 1906 aaPredicted RBP3.6□□□□□ -1.83
SCN3A-203ENST00000409101 CYSRT1A8MQ03 144 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 REG3GQ6UW15 175 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 Q8IZM0 81 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 WFDC10BQ8IUB3 73 aa3.6□□□□□ -1.83
SCN3A-203ENST00000409101 CELA1Q9UNI1 258 aa3.59□□□□□ -1.83
SCN3A-203ENST00000409101 EGFEM1PQ0D2K5 195 aa3.59□□□□□ -1.83
SCN3A-203ENST00000409101 C10orf25Q5T742 122 aa3.59□□□□□ -1.83
SCN3A-203ENST00000409101 CDC42SE2Q9NRR3 84 aa3.59□□□□□ -1.83
SCN3A-203ENST00000409101 CIRBP-AS1Q8TBR5 109 aa3.59□□□□□ -1.83
SCN3A-203ENST00000409101 MED12LQ86YW9 2145 aa3.59□□□□□ -1.84
SCN3A-203ENST00000409101 C3orf84H3BNL1 204 aa3.59□□□□□ -1.84
SCN3A-203ENST00000409101 LINC00308Q8TCZ7 52 aa3.59□□□□□ -1.84
SCN3A-203ENST00000409101 TTTY13Q9BZ97 58 aa3.58□□□□□ -1.84
SCN3A-203ENST00000409101 WNK2Q9Y3S1 2297 aa3.58□□□□□ -1.84
SCN3A-203ENST00000409101 PIEZO1Q92508 2521 aa3.58□□□□□ -1.84
SCN3A-203ENST00000409101 BPY2O14599 106 aa3.58□□□□□ -1.84
SCN3A-203ENST00000409101 DLEU1O43261 78 aa3.58□□□□□ -1.84
SCN3A-203ENST00000409101 WFDC9Q8NEX5 89 aa3.58□□□□□ -1.84
SCN3A-203ENST00000409101 C16orf90A8MZG2 172 aa3.58□□□□□ -1.84
SCN3A-203ENST00000409101 NUPR1O60356 82 aa3.58□□□□□ -1.84
SCN3A-203ENST00000409101 ETDBQ3ZM63 59 aa3.58□□□□□ -1.84
SCN3A-203ENST00000409101 TTC28Q96AY4 2481 aa3.58□□□□□ -1.84
SCN3A-203ENST00000409101 MRPS12O15235 138 aaKnown RBP3.58□□□□□ -1.84
SCN3A-203ENST00000409101 CADP27708 2225 aa3.57□□□□□ -1.84
SCN3A-203ENST00000409101 IGKV3D-7A0A0C4DH55 119 aa3.57□□□□□ -1.84
SCN3A-203ENST00000409101 J3QL48 77 aa3.57□□□□□ -1.84
SCN3A-203ENST00000409101 K7EP13 123 aa3.57□□□□□ -1.84
SCN3A-203ENST00000409101 ZNF73O43830 326 aaPredicted RBP3.57□□□□□ -1.84
SCN3A-203ENST00000409101 C6orf99Q4VX62 202 aa3.57□□□□□ -1.84
SCN3A-203ENST00000409101 PRRC2AP48634 2157 aaKnown RBP3.57□□□□□ -1.84
SCN3A-203ENST00000409101 NRACQ8N912 160 aa3.57□□□□□ -1.84
SCN3A-203ENST00000409101 PTH2Q96A98 100 aa3.57□□□□□ -1.84
SCN3A-203ENST00000409101 XGP55808 180 aa3.57□□□□□ -1.84
SCN3A-203ENST00000409101 LINC00337Q8N6G1 96 aa3.57□□□□□ -1.84
SCN3A-203ENST00000409101 PCNX1Q96RV3 2341 aa3.57□□□□□ -1.84
SCN3A-203ENST00000409101 KIAA1549Q9HCM3 1950 aa3.57□□□□□ -1.84
SCN3A-203ENST00000409101 NBASA2RRP1 2371 aa3.57□□□□□ -1.84
SCN3A-203ENST00000409101 C2orf48Q96LS8 159 aa3.56□□□□□ -1.84
SCN3A-203ENST00000409101 ABCA1O95477 2261 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms