RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 C9orf85Q96MD7 179 aa10.39□□□□□ -0.75
ITGA6-202ENST00000409080 LRCOL1A6NCL2 159 aa10.38□□□□□ -0.75
ITGA6-202ENST00000409080 IBA57-AS1B1ANH7 110 aa10.38□□□□□ -0.75
ITGA6-202ENST00000409080 NPSP0C0P6 89 aa10.38□□□□□ -0.75
ITGA6-202ENST00000409080 ACYP1P07311 99 aa10.38□□□□□ -0.75
ITGA6-202ENST00000409080 NREPQ16612 68 aa10.38□□□□□ -0.75
ITGA6-202ENST00000409080 MAJINQ3KP22 176 aa10.38□□□□□ -0.75
ITGA6-202ENST00000409080 PYGO1Q9Y3Y4 419 aa10.38□□□□□ -0.75
ITGA6-202ENST00000409080 PDE6GP18545 87 aa10.37□□□□□ -0.75
ITGA6-202ENST00000409080 PROK1P58294 105 aa10.37□□□□□ -0.75
ITGA6-202ENST00000409080 IGLV4-69A0A075B6H9 119 aa10.37□□□□□ -0.75
ITGA6-202ENST00000409080 ZNF706Q9Y5V0 76 aaPredicted RBP10.37□□□□□ -0.75
ITGA6-202ENST00000409080 TRBV27A0A0K0K1C4 114 aa10.37□□□□□ -0.75
ITGA6-202ENST00000409080 IGLV4-3A0A075B6K6 122 aa10.37□□□□□ -0.75
ITGA6-202ENST00000409080 LOC107984640A0A0U1RRK4 108 aa10.37□□□□□ -0.75
ITGA6-202ENST00000409080 NTN5Q8WTR8 489 aaPredicted RBP10.36□□□□□ -0.75
ITGA6-202ENST00000409080 TMEM256-PLSCR3K7ERE1 68 aa10.36□□□□□ -0.75
ITGA6-202ENST00000409080 LECT2O14960 151 aa10.36□□□□□ -0.75
ITGA6-202ENST00000409080 RNASE3P12724 160 aaKnown RBP10.36□□□□□ -0.75
ITGA6-202ENST00000409080 ETDBQ3ZM63 59 aa10.36□□□□□ -0.75
ITGA6-202ENST00000409080 UBE2D1P51668 147 aa10.36□□□□□ -0.75
ITGA6-202ENST00000409080 CHD8Q9HCK8 2581 aa10.36□□□□□ -0.75
ITGA6-202ENST00000409080 RAI1Q7Z5J4 1906 aaPredicted RBP10.36□□□□□ -0.75
ITGA6-202ENST00000409080 ANKRD11Q6UB99 2663 aaPredicted RBP10.36□□□□□ -0.75
ITGA6-202ENST00000409080 H3BMG7 143 aa10.35□□□□□ -0.75
ITGA6-202ENST00000409080 CRIP1P50238 77 aa10.35□□□□□ -0.75
ITGA6-202ENST00000409080 FAM19A5Q7Z5A7 132 aaPredicted RBP10.35□□□□□ -0.75
ITGA6-202ENST00000409080 CDKN2A-AS1Q9UH64 79 aa10.35□□□□□ -0.75
ITGA6-202ENST00000409080 PCP4P48539 62 aa10.34□□□□□ -0.75
ITGA6-202ENST00000409080 IGLV2-11P01706 119 aa10.34□□□□□ -0.75
ITGA6-202ENST00000409080 SPATA12Q7Z6I5 190 aa10.34□□□□□ -0.75
ITGA6-202ENST00000409080 Q8N2B8 174 aa10.34□□□□□ -0.75
ITGA6-202ENST00000409080 COL4A2P08572 1712 aa10.34□□□□□ -0.75
ITGA6-202ENST00000409080 RBM3P98179 157 aaKnown RBP10.33□□□□□ -0.76
ITGA6-202ENST00000409080 RETNQ9HD89 108 aa10.33□□□□□ -0.76
ITGA6-202ENST00000409080 CEP295Q9C0D2 2601 aa10.33□□□□□ -0.76
ITGA6-202ENST00000409080 LINC01620Q4KN68 170 aa10.32□□□□□ -0.76
ITGA6-202ENST00000409080 SPANXB1Q9NS25 103 aaPredicted RBP10.32□□□□□ -0.76
ITGA6-202ENST00000409080 UBE2D3P61077 147 aa10.32□□□□□ -0.76
ITGA6-202ENST00000409080 UBE2D2P62837 147 aa10.32□□□□□ -0.76
ITGA6-202ENST00000409080 PRR9Q5T870 116 aa10.32□□□□□ -0.76
ITGA6-202ENST00000409080 A0A0J9YXY3 114 aa10.32□□□□□ -0.76
ITGA6-202ENST00000409080 MUC7Q8TAX7 377 aa10.32□□□□□ -0.76
ITGA6-202ENST00000409080 NUPR1O60356 82 aa10.31□□□□□ -0.76
ITGA6-202ENST00000409080 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
ITGA6-202ENST00000409080 MYO9AB2RTY4 2548 aa10.31□□□□□ -0.76
ITGA6-202ENST00000409080 ZNF22P17026 224 aaPredicted RBP10.31□□□□□ -0.76
ITGA6-202ENST00000409080 LINC00959A0A1B0GUT2 108 aa10.3□□□□□ -0.76
ITGA6-202ENST00000409080 K7EP13 123 aa10.3□□□□□ -0.76
ITGA6-202ENST00000409080 JMJD1CQ15652 2540 aa10.3□□□□□ -0.76
ITGA6-202ENST00000409080 EML5Q05BV3 1969 aa10.3□□□□□ -0.76
ITGA6-202ENST00000409080 LOC100131303A0A0U1RQF7 123 aa10.3□□□□□ -0.76
ITGA6-202ENST00000409080 TMEM223A0PJW6 202 aa10.3□□□□□ -0.76
ITGA6-202ENST00000409080 ARHGAP32A7KAX9 2087 aa10.3□□□□□ -0.76
ITGA6-202ENST00000409080 CPAMD8Q8IZJ3 1885 aa10.29□□□□□ -0.76
ITGA6-202ENST00000409080 TSHBP01222 138 aa10.29□□□□□ -0.76
ITGA6-202ENST00000409080 MP68P56378 58 aa10.29□□□□□ -0.76
ITGA6-202ENST00000409080 RNF185Q96GF1 192 aa10.29□□□□□ -0.76
ITGA6-202ENST00000409080 TNRC6BQ9UPQ9 1833 aaKnown RBP10.29□□□□□ -0.76
ITGA6-202ENST00000409080 ZFYVE26Q68DK2 2539 aa10.28□□□□□ -0.76
ITGA6-202ENST00000409080 Q6ZTC4 211 aa10.28□□□□□ -0.76
ITGA6-202ENST00000409080 XAGE1AQ9HD64 81 aa10.28□□□□□ -0.76
ITGA6-202ENST00000409080 H0Y9J4 135 aa10.27□□□□□ -0.76
ITGA6-202ENST00000409080 A0A1B0GX51 115 aa10.27□□□□□ -0.77
ITGA6-202ENST00000409080 C11orf21Q9P2W6 132 aa10.27□□□□□ -0.77
ITGA6-202ENST00000409080 M0R378 163 aa10.26□□□□□ -0.77
ITGA6-202ENST00000409080 H3BT86 120 aa10.26□□□□□ -0.77
ITGA6-202ENST00000409080 C1orf134Q5TEV5 83 aa10.26□□□□□ -0.77
ITGA6-202ENST00000409080 SPTBN4Q9H254 2564 aa10.26□□□□□ -0.77
ITGA6-202ENST00000409080 TTTY13Q9BZ97 58 aa10.26□□□□□ -0.77
ITGA6-202ENST00000409080 ATG2AQ2TAZ0 1938 aa10.26□□□□□ -0.77
ITGA6-202ENST00000409080 UBE2D4Q9Y2X8 147 aa10.26□□□□□ -0.77
ITGA6-202ENST00000409080 EDN2P20800 178 aa10.26□□□□□ -0.77
ITGA6-202ENST00000409080 A0A0B4J2C4 111 aa10.25□□□□□ -0.77
ITGA6-202ENST00000409080 MRPS12O15235 138 aaKnown RBP10.25□□□□□ -0.77
ITGA6-202ENST00000409080 COX17Q14061 63 aa10.25□□□□□ -0.77
ITGA6-202ENST00000409080 C1orf158Q8N1D5 194 aa10.25□□□□□ -0.77
ITGA6-202ENST00000409080 HCFC1P51610 2035 aa10.25□□□□□ -0.77
ITGA6-202ENST00000409080 ZNF462Q96JM2 2506 aa10.25□□□□□ -0.77
ITGA6-202ENST00000409080 POLR2KP53803 58 aaKnown RBP10.25□□□□□ -0.77
ITGA6-202ENST00000409080 FXYD2P54710 66 aa10.25□□□□□ -0.77
ITGA6-202ENST00000409080 DHRS4-AS1Q9P1J3 65 aa10.25□□□□□ -0.77
ITGA6-202ENST00000409080 PLXNB1O43157 2135 aa10.24□□□□□ -0.77
ITGA6-202ENST00000409080 IGLV5-52A0A0A0MRZ9 124 aa10.24□□□□□ -0.77
ITGA6-202ENST00000409080 ABCA12Q86UK0 2595 aa10.24□□□□□ -0.77
ITGA6-202ENST00000409080 TRBV10-2A0A0K0K1G8 114 aa10.23□□□□□ -0.77
ITGA6-202ENST00000409080 G3V4G9 280 aa10.23□□□□□ -0.77
ITGA6-202ENST00000409080 LRRK2Q5S007 2527 aa10.23□□□□□ -0.77
ITGA6-202ENST00000409080 CNFNQ9BYD5 112 aa10.23□□□□□ -0.77
ITGA6-202ENST00000409080 PRM2P04554 102 aa10.23□□□□□ -0.77
ITGA6-202ENST00000409080 NRACQ8N912 160 aa10.23□□□□□ -0.77
ITGA6-202ENST00000409080 TRAV23DV6A0A075B6W5 121 aa10.22□□□□□ -0.77
ITGA6-202ENST00000409080 FHL3Q13643 280 aa10.22□□□□□ -0.77
ITGA6-202ENST00000409080 Q8IZM0 81 aa10.22□□□□□ -0.77
ITGA6-202ENST00000409080 TIMM17BO60830 172 aa10.22□□□□□ -0.77
ITGA6-202ENST00000409080 LINC00308Q8TCZ7 52 aa10.22□□□□□ -0.77
ITGA6-202ENST00000409080 RNASE8Q8TDE3 154 aaKnown RBP10.22□□□□□ -0.77
ITGA6-202ENST00000409080 FSHBP01225 129 aa10.22□□□□□ -0.77
ITGA6-202ENST00000409080 CHKB-CPT1BH3BT56 60 aa10.22□□□□□ -0.77
ITGA6-202ENST00000409080 KRTAP24-1Q3LI83 254 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms