RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 DCANP1Q8TF63 244 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 UBE2WQ96B02 151 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 CHCHD5Q9BSY4 110 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 CDIP1Q9H305 208 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 PRO0461Q9UI25 63 aa6.13□□□□□ -1.43
SNX13-201ENST00000409076 A6NDX4 124 aa6.12□□□□□ -1.43
SNX13-201ENST00000409076 GAGE2AQ6NT46 116 aa6.12□□□□□ -1.43
SNX13-201ENST00000409076 SLC25A29Q8N8R3 303 aa6.12□□□□□ -1.43
SNX13-201ENST00000409076 SETXQ7Z333 2677 aaKnown RBP6.12□□□□□ -1.43
SNX13-201ENST00000409076 ITPR2Q14571 2701 aa6.12□□□□□ -1.43
SNX13-201ENST00000409076 TRBV7-9A0A0J9YWB2 115 aa6.12□□□□□ -1.43
SNX13-201ENST00000409076 TINCRA0A1B0GVN0 87 aa6.12□□□□□ -1.43
SNX13-201ENST00000409076 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
SNX13-201ENST00000409076 ATP5G1P05496 136 aa6.12□□□□□ -1.43
SNX13-201ENST00000409076 FBXL19-AS1Q494R0 122 aa6.12□□□□□ -1.43
SNX13-201ENST00000409076 POM121L12Q8N7R1 296 aa6.12□□□□□ -1.43
SNX13-201ENST00000409076 SMIM20Q8N5G0 67 aa6.12□□□□□ -1.43
SNX13-201ENST00000409076 TRGV11A0A075B6L2 103 aa6.11□□□□□ -1.43
SNX13-201ENST00000409076 CCDC179H3BU77 68 aa6.11□□□□□ -1.43
SNX13-201ENST00000409076 SOCS3O14543 225 aa6.11□□□□□ -1.43
SNX13-201ENST00000409076 LEPROTO15243 131 aa6.11□□□□□ -1.43
SNX13-201ENST00000409076 LINC00315P59091 139 aa6.11□□□□□ -1.43
SNX13-201ENST00000409076 Q6ZTI0 123 aa6.11□□□□□ -1.43
SNX13-201ENST00000409076 SVIPQ8NHG7 77 aa6.11□□□□□ -1.43
SNX13-201ENST00000409076 ICOSQ9Y6W8 199 aa6.11□□□□□ -1.43
SNX13-201ENST00000409076 IGLV10-54A0A075B6I4 117 aa6.11□□□□□ -1.43
SNX13-201ENST00000409076 UNC79Q9P2D8 2635 aa6.11□□□□□ -1.43
SNX13-201ENST00000409076 TRGV4A0A0C4DH28 118 aa6.11□□□□□ -1.43
SNX13-201ENST00000409076 TMEM223A0PJW6 202 aa6.11□□□□□ -1.43
SNX13-201ENST00000409076 LINC00694P0DN24 101 aa6.1□□□□□ -1.43
SNX13-201ENST00000409076 COX6B1P14854 86 aa6.1□□□□□ -1.43
SNX13-201ENST00000409076 CIRBPQ14011 172 aaKnown RBP6.1□□□□□ -1.43
SNX13-201ENST00000409076 Q96MF0 132 aa6.1□□□□□ -1.43
SNX13-201ENST00000409076 PAX4O43316 350 aa6.1□□□□□ -1.43
SNX13-201ENST00000409076 SLPIP03973 132 aa6.1□□□□□ -1.43
SNX13-201ENST00000409076 UBE2D1P51668 147 aa6.1□□□□□ -1.43
SNX13-201ENST00000409076 COX6A2Q02221 97 aa6.1□□□□□ -1.43
SNX13-201ENST00000409076 HELZ2Q9BYK8 2649 aaKnown RBP6.1□□□□□ -1.43
SNX13-201ENST00000409076 KLLNB2CW77 178 aa6.09□□□□□ -1.43
SNX13-201ENST00000409076 ZNF415Q09FC8 603 aa6.09□□□□□ -1.43
SNX13-201ENST00000409076 KIF25-AS1Q9Y6Z4 181 aa6.09□□□□□ -1.43
SNX13-201ENST00000409076 MRPL23Q16540 153 aaKnown RBP6.09□□□□□ -1.43
SNX13-201ENST00000409076 HIVEP1P15822 2718 aa6.09□□□□□ -1.43
SNX13-201ENST00000409076 IGKV3D-7A0A0C4DH55 119 aa6.09□□□□□ -1.44
SNX13-201ENST00000409076 K7EQG2 157 aa6.09□□□□□ -1.44
SNX13-201ENST00000409076 TIMM17AQ99595 171 aa6.09□□□□□ -1.44
SNX13-201ENST00000409076 LENEPQ9Y5L5 61 aa6.09□□□□□ -1.44
SNX13-201ENST00000409076 NBEAL1Q6ZS30 2694 aa6.09□□□□□ -1.44
SNX13-201ENST00000409076 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.08□□□□□ -1.44
SNX13-201ENST00000409076 LINC00526Q96FQ7 95 aa6.08□□□□□ -1.44
SNX13-201ENST00000409076 RBMY1BA6NDE4 496 aaKnown RBP6.08□□□□□ -1.44
SNX13-201ENST00000409076 RBMY1EA6NEQ0 496 aaKnown RBP6.08□□□□□ -1.44
SNX13-201ENST00000409076 RBMY1DP0C7P1 496 aaKnown RBP6.08□□□□□ -1.44
SNX13-201ENST00000409076 COX8CQ7Z4L0 72 aa6.08□□□□□ -1.44
SNX13-201ENST00000409076 XCL1P47992 114 aa6.08□□□□□ -1.44
SNX13-201ENST00000409076 IGHV4-4A0A075B6R2 117 aa6.07□□□□□ -1.44
SNX13-201ENST00000409076 TRBV27A0A0K0K1C4 114 aa6.07□□□□□ -1.44
SNX13-201ENST00000409076 DNAL4O96015 105 aa6.07□□□□□ -1.44
SNX13-201ENST00000409076 TMEM263Q8WUH6 116 aaKnown RBP6.07□□□□□ -1.44
SNX13-201ENST00000409076 LINC01356Q8N9X3 169 aa6.07□□□□□ -1.44
SNX13-201ENST00000409076 LGALS9O00182 355 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 INSP01308 110 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 NBPF19A0A087WUL8 3843 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 FAM236AA0A1B0GUQ0 79 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 FAM236BA0A1B0GV22 79 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 PSMB8P28062 276 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 RPL36AP83881 106 aaKnown RBP6.06□□□□□ -1.44
SNX13-201ENST00000409076 RPL36ALQ969Q0 106 aaKnown RBP6.06□□□□□ -1.44
SNX13-201ENST00000409076 IGHV1-58A0A0C4DH39 117 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 LINC01619G3V211 115 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 IFITM1P13164 125 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 UBE2D3P61077 147 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 HIST1H4AP62805 103 aaKnown RBP6.06□□□□□ -1.44
SNX13-201ENST00000409076 UBE2D2P62837 147 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 Q8N2B8 174 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 MAP6D1Q9H9H5 199 aa6.06□□□□□ -1.44
SNX13-201ENST00000409076 HERV-K104P63124 156 aa6.05□□□□□ -1.44
SNX13-201ENST00000409076 VPREB3Q9UKI3 123 aa6.05□□□□□ -1.44
SNX13-201ENST00000409076 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.05□□□□□ -1.44
SNX13-201ENST00000409076 TMEM101Q96IK0 257 aa6.05□□□□□ -1.44
SNX13-201ENST00000409076 YAE1D1Q9NRH1 226 aa6.05□□□□□ -1.44
SNX13-201ENST00000409076 H7C423 109 aa6.05□□□□□ -1.44
SNX13-201ENST00000409076 RHOHQ15669 191 aa6.05□□□□□ -1.44
SNX13-201ENST00000409076 C9orf85Q96MD7 179 aa6.05□□□□□ -1.44
SNX13-201ENST00000409076 PRR3P79522 188 aaKnown RBP6.04□□□□□ -1.44
SNX13-201ENST00000409076 EDA2RQ9HAV5 297 aa6.04□□□□□ -1.44
SNX13-201ENST00000409076 IGLV1-40P01703 118 aa6.04□□□□□ -1.44
SNX13-201ENST00000409076 BAALC-AS2P0C853 105 aa6.04□□□□□ -1.44
SNX13-201ENST00000409076 SHISA2Q6UWI4 295 aa6.04□□□□□ -1.44
SNX13-201ENST00000409076 MIR7-3HGQ8N6C7 128 aa6.04□□□□□ -1.44
SNX13-201ENST00000409076 VSIG2Q96IQ7 327 aa6.04□□□□□ -1.44
SNX13-201ENST00000409076 NOTCH1P46531 2555 aa6.04□□□□□ -1.44
SNX13-201ENST00000409076 PEMTQ9UBM1 199 aa6.04□□□□□ -1.44
SNX13-201ENST00000409076 CRPP02741 224 aa6.03□□□□□ -1.44
SNX13-201ENST00000409076 NDUFV3P56181 108 aaKnown RBP6.03□□□□□ -1.44
SNX13-201ENST00000409076 CITED2Q99967 270 aaPredicted RBP6.03□□□□□ -1.44
SNX13-201ENST00000409076 C14orf132Q9NPU4 83 aa6.03□□□□□ -1.44
SNX13-201ENST00000409076 KLK5Q9Y337 293 aaPredicted RBP6.03□□□□□ -1.44
SNX13-201ENST00000409076 C6orf226Q5I0X4 101 aa6.03□□□□□ -1.44
SNX13-201ENST00000409076 PDZD2O15018 2839 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms