RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 Q8N8P6 123 aa7.14□□□□□ -1.27
RPAIN-204ENST00000405578 PRSS3P2Q8NHM4 247 aa7.14□□□□□ -1.27
RPAIN-204ENST00000405578 ALKBH7Q9BT30 221 aaPredicted RBP7.14□□□□□ -1.27
RPAIN-204ENST00000405578 A0A1B0GUV1 79 aa7.13□□□□□ -1.27
RPAIN-204ENST00000405578 IBA57-AS1B1ANH7 110 aa7.13□□□□□ -1.27
RPAIN-204ENST00000405578 ANGP03950 147 aaKnown RBP7.13□□□□□ -1.27
RPAIN-204ENST00000405578 ZNF25P17030 456 aaPredicted RBP7.13□□□□□ -1.27
RPAIN-204ENST00000405578 RAB5BP61020 215 aa7.13□□□□□ -1.27
RPAIN-204ENST00000405578 RBX1P62877 108 aa7.13□□□□□ -1.27
RPAIN-204ENST00000405578 Q0VG73 95 aa7.13□□□□□ -1.27
RPAIN-204ENST00000405578 ORMDL2Q53FV1 153 aa7.13□□□□□ -1.27
RPAIN-204ENST00000405578 MPV17L2Q567V2 206 aa7.13□□□□□ -1.27
RPAIN-204ENST00000405578 RNASEKQ6P5S7 137 aaKnown RBP7.13□□□□□ -1.27
RPAIN-204ENST00000405578 C6orf223Q8N319 242 aa7.13□□□□□ -1.27
RPAIN-204ENST00000405578 RMI2Q96E14 147 aa7.13□□□□□ -1.27
RPAIN-204ENST00000405578 KLK12Q9UKR0 248 aa7.13□□□□□ -1.27
RPAIN-204ENST00000405578 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.12□□□□□ -1.27
RPAIN-204ENST00000405578 IGKV2-29A2NJV5 120 aaPredicted RBP7.12□□□□□ -1.27
RPAIN-204ENST00000405578 FGF6P10767 208 aa7.12□□□□□ -1.27
RPAIN-204ENST00000405578 ESDP10768 282 aa7.12□□□□□ -1.27
RPAIN-204ENST00000405578 FA2HQ7L5A8 372 aa7.12□□□□□ -1.27
RPAIN-204ENST00000405578 Q8N976 141 aa7.12□□□□□ -1.27
RPAIN-204ENST00000405578 OR5A1Q8NGJ0 315 aa7.12□□□□□ -1.27
RPAIN-204ENST00000405578 COLCA2A8K830 154 aa7.11□□□□□ -1.27
RPAIN-204ENST00000405578 EPM2AB3EWF7 344 aa7.11□□□□□ -1.27
RPAIN-204ENST00000405578 INAFM2P0DMQ5 153 aa7.11□□□□□ -1.27
RPAIN-204ENST00000405578 IFI27P40305 119 aaPredicted RBP7.11□□□□□ -1.27
RPAIN-204ENST00000405578 C20orf203Q8NBC4 194 aa7.11□□□□□ -1.27
RPAIN-204ENST00000405578 UBE2WQ96B02 151 aa7.11□□□□□ -1.27
RPAIN-204ENST00000405578 TM2D2Q9BX73 214 aa7.11□□□□□ -1.27
RPAIN-204ENST00000405578 KRTAP1-5Q9BYS1 174 aa7.11□□□□□ -1.27
RPAIN-204ENST00000405578 Q9HAA7 133 aa7.11□□□□□ -1.27
RPAIN-204ENST00000405578 COX11Q9Y6N1 276 aa7.11□□□□□ -1.27
RPAIN-204ENST00000405578 FLG2Q5D862 2391 aaPredicted RBP7.1□□□□□ -1.27
RPAIN-204ENST00000405578 PSCAO43653 123 aa7.1□□□□□ -1.27
RPAIN-204ENST00000405578 MIAQ16674 131 aa7.1□□□□□ -1.27
RPAIN-204ENST00000405578 MRPL52Q86TS9 123 aaKnown RBP7.1□□□□□ -1.27
RPAIN-204ENST00000405578 Q8N3U1 123 aa7.1□□□□□ -1.27
RPAIN-204ENST00000405578 SPANXA1Q9NS26 97 aa7.1□□□□□ -1.27
RPAIN-204ENST00000405578 CYSLTR1Q9Y271 337 aa7.1□□□□□ -1.27
RPAIN-204ENST00000405578 LINC01549A6NIU2 74 aa7.09□□□□□ -1.27
RPAIN-204ENST00000405578 TRGC2P03986 189 aa7.09□□□□□ -1.27
RPAIN-204ENST00000405578 REG3AQ06141 175 aa7.09□□□□□ -1.27
RPAIN-204ENST00000405578 LINC00269Q8N2A0 174 aa7.09□□□□□ -1.27
RPAIN-204ENST00000405578 TIMM21Q9BVV7 248 aa7.09□□□□□ -1.27
RPAIN-204ENST00000405578 C1orf43Q9BWL3 253 aa7.09□□□□□ -1.27
RPAIN-204ENST00000405578 AP5S1Q9NUS5 200 aa7.09□□□□□ -1.27
RPAIN-204ENST00000405578 CSDC2Q9Y534 153 aaKnown RBP7.09□□□□□ -1.27
RPAIN-204ENST00000405578 MYCBP2O75592 4640 aa7.08□□□□□ -1.28
RPAIN-204ENST00000405578 C1orf196B1AJZ1 125 aa7.08□□□□□ -1.28
RPAIN-204ENST00000405578 C18orf32Q8TCD1 76 aa7.08□□□□□ -1.28
RPAIN-204ENST00000405578 FAT1Q14517 4588 aa7.08□□□□□ -1.28
RPAIN-204ENST00000405578 IGLV4-60A0A075B6I1 120 aa7.07□□□□□ -1.28
RPAIN-204ENST00000405578 IGKV2D-24A0A075B6R9 120 aa7.07□□□□□ -1.28
RPAIN-204ENST00000405578 TRAV8-4A0A0B4J246 113 aa7.07□□□□□ -1.28
RPAIN-204ENST00000405578 LINC00614P0C842 121 aa7.07□□□□□ -1.28
RPAIN-204ENST00000405578 PAPPA-AS1Q5QFB9 102 aa7.07□□□□□ -1.28
RPAIN-204ENST00000405578 C2orf66Q6UXQ4 117 aa7.07□□□□□ -1.28
RPAIN-204ENST00000405578 SPATA12Q7Z6I5 190 aa7.07□□□□□ -1.28
RPAIN-204ENST00000405578 BAGE3Q86Y29 109 aa7.07□□□□□ -1.28
RPAIN-204ENST00000405578 ZNF664Q8N3J9 261 aa7.07□□□□□ -1.28
RPAIN-204ENST00000405578 PRR34Q9NV39 138 aa7.07□□□□□ -1.28
RPAIN-204ENST00000405578 UBE2D4Q9Y2X8 147 aa7.07□□□□□ -1.28
RPAIN-204ENST00000405578 SRRM2Q9UQ35 2752 aaKnown RBP7.06□□□□□ -1.28
RPAIN-204ENST00000405578 LINC01546A6NGU7 62 aa7.06□□□□□ -1.28
RPAIN-204ENST00000405578 LINC00587B1AMM8 73 aa7.06□□□□□ -1.28
RPAIN-204ENST00000405578 EREGO14944 169 aa7.06□□□□□ -1.28
RPAIN-204ENST00000405578 RPL39P62891 51 aaKnown RBP7.06□□□□□ -1.28
RPAIN-204ENST00000405578 CLPSL2Q6UWE3 100 aa7.06□□□□□ -1.28
RPAIN-204ENST00000405578 ENHOQ6UWT2 76 aa7.06□□□□□ -1.28
RPAIN-204ENST00000405578 Q6ZN92 141 aa7.06□□□□□ -1.28
RPAIN-204ENST00000405578 CDC42SE2Q9NRR3 84 aa7.06□□□□□ -1.28
RPAIN-204ENST00000405578 PYGO1Q9Y3Y4 419 aa7.06□□□□□ -1.28
RPAIN-204ENST00000405578 UBR4Q5T4S7 5183 aa7.06□□□□□ -1.28
RPAIN-204ENST00000405578 IGKV3OR2-268A0A0C4DH90 116 aa7.05□□□□□ -1.28
RPAIN-204ENST00000405578 C5orf52A6NGY3 159 aa7.05□□□□□ -1.28
RPAIN-204ENST00000405578 CCL25O15444 150 aa7.05□□□□□ -1.28
RPAIN-204ENST00000405578 NPSP0C0P6 89 aa7.05□□□□□ -1.28
RPAIN-204ENST00000405578 MRPS36P82909 103 aaKnown RBP7.05□□□□□ -1.28
RPAIN-204ENST00000405578 SS18Q15532 418 aa7.05□□□□□ -1.28
RPAIN-204ENST00000405578 CHCHD1Q96BP2 118 aaKnown RBP7.05□□□□□ -1.28
RPAIN-204ENST00000405578 TOMM6Q96B49 74 aa7.04□□□□□ -1.28
RPAIN-204ENST00000405578 TMEM141Q96I45 108 aa7.04□□□□□ -1.28
RPAIN-204ENST00000405578 SCGB3A1Q96QR1 104 aa7.04□□□□□ -1.28
RPAIN-204ENST00000405578 C2orf88Q9BSF0 95 aa7.04□□□□□ -1.28
RPAIN-204ENST00000405578 IGLV10-54A0A075B6I4 117 aa7.03□□□□□ -1.28
RPAIN-204ENST00000405578 HSBP1O75506 76 aa7.03□□□□□ -1.28
RPAIN-204ENST00000405578 HBDP02042 147 aa7.03□□□□□ -1.28
RPAIN-204ENST00000405578 Q6ZUT4 128 aa7.03□□□□□ -1.28
RPAIN-204ENST00000405578 ERASQ7Z444 233 aa7.03□□□□□ -1.28
RPAIN-204ENST00000405578 TIMM17AQ99595 171 aa7.03□□□□□ -1.28
RPAIN-204ENST00000405578 VCX2Q9H322 139 aa7.03□□□□□ -1.28
RPAIN-204ENST00000405578 IFITM10A6NMD0 228 aa7.02□□□□□ -1.29
RPAIN-204ENST00000405578 KRTAP10-2P60368 255 aa7.02□□□□□ -1.29
RPAIN-204ENST00000405578 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
RPAIN-204ENST00000405578 Q5VSD8 79 aa7.02□□□□□ -1.29
RPAIN-204ENST00000405578 TEX43Q6ZNM6 134 aa7.02□□□□□ -1.29
RPAIN-204ENST00000405578 Q6ZRN7 208 aaPredicted RBP7.02□□□□□ -1.29
RPAIN-204ENST00000405578 IGLV4-3A0A075B6K6 122 aa7.01□□□□□ -1.29
RPAIN-204ENST00000405578 TRAV13-1A0A0B4J241 112 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms