RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 Q6ZQY7 126 aa7.19□□□□□ -1.26
SMAD9-203ENST00000399275 K7EQD1 137 aa7.19□□□□□ -1.26
SMAD9-203ENST00000399275 CEMP1Q6PRD7 247 aaPredicted RBP7.19□□□□□ -1.26
SMAD9-203ENST00000399275 Q6ZS46 218 aa7.19□□□□□ -1.26
SMAD9-203ENST00000399275 FAM19A1Q7Z5A9 133 aa7.19□□□□□ -1.26
SMAD9-203ENST00000399275 IGKV2D-24A0A075B6R9 120 aa7.19□□□□□ -1.26
SMAD9-203ENST00000399275 EP300Q09472 2414 aaPredicted RBP7.19□□□□□ -1.26
SMAD9-203ENST00000399275 CDKN2A-AS1Q9UH64 79 aa7.19□□□□□ -1.26
SMAD9-203ENST00000399275 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
SMAD9-203ENST00000399275 IGHV4-30-4P0DP06 118 aa7.18□□□□□ -1.26
SMAD9-203ENST00000399275 IGHV4-31P0DP07 118 aa7.18□□□□□ -1.26
SMAD9-203ENST00000399275 ODF3Q96PU9 254 aa7.18□□□□□ -1.26
SMAD9-203ENST00000399275 NTM-AS1Q6ZSK4 140 aa7.18□□□□□ -1.26
SMAD9-203ENST00000399275 LINC01561Q8N1V8 128 aa7.18□□□□□ -1.26
SMAD9-203ENST00000399275 BPESC1Q9GZL8 116 aa7.18□□□□□ -1.26
SMAD9-203ENST00000399275 HHLA3Q9XRX5 114 aa7.18□□□□□ -1.26
SMAD9-203ENST00000399275 UBE2D4Q9Y2X8 147 aa7.18□□□□□ -1.26
SMAD9-203ENST00000399275 TRBV6-5A0A0K0K1A5 114 aa7.18□□□□□ -1.26
SMAD9-203ENST00000399275 B4DSR2 109 aa7.18□□□□□ -1.26
SMAD9-203ENST00000399275 MSMPQ1L6U9 139 aa7.18□□□□□ -1.26
SMAD9-203ENST00000399275 IBA57-AS1B1ANH7 110 aa7.17□□□□□ -1.26
SMAD9-203ENST00000399275 B9D2Q9BPU9 175 aa7.17□□□□□ -1.26
SMAD9-203ENST00000399275 RUSC1-AS1Q66K80 236 aa7.17□□□□□ -1.26
SMAD9-203ENST00000399275 PTPRZ1P23471 2315 aaPredicted RBP7.17□□□□□ -1.26
SMAD9-203ENST00000399275 CD164L2Q6UWJ8 174 aa7.17□□□□□ -1.26
SMAD9-203ENST00000399275 NOP10Q9NPE3 64 aaKnown RBP7.17□□□□□ -1.26
SMAD9-203ENST00000399275 FAM19A4Q96LR4 140 aa7.16□□□□□ -1.26
SMAD9-203ENST00000399275 CACNA1EQ15878 2313 aa7.16□□□□□ -1.26
SMAD9-203ENST00000399275 PTPRSQ13332 1948 aa7.16□□□□□ -1.26
SMAD9-203ENST00000399275 ZNF73O43830 326 aaPredicted RBP7.16□□□□□ -1.26
SMAD9-203ENST00000399275 KTN1-AS1Q86SY8 53 aa7.16□□□□□ -1.26
SMAD9-203ENST00000399275 HILS1P60008 231 aa7.16□□□□□ -1.26
SMAD9-203ENST00000399275 Q8N9W7 124 aa7.16□□□□□ -1.26
SMAD9-203ENST00000399275 SMIM11BQ8TCY0 68 aa7.16□□□□□ -1.26
SMAD9-203ENST00000399275 LCA10Q71F78 164 aa7.16□□□□□ -1.26
SMAD9-203ENST00000399275 ABCA4P78363 2273 aa7.15□□□□□ -1.26
SMAD9-203ENST00000399275 PCNTO95613 3336 aa7.15□□□□□ -1.26
SMAD9-203ENST00000399275 CNFNQ9BYD5 112 aa7.15□□□□□ -1.27
SMAD9-203ENST00000399275 hDV103S1A0JD37 113 aa7.14□□□□□ -1.27
SMAD9-203ENST00000399275 FREM1Q5H8C1 2179 aa7.14□□□□□ -1.27
SMAD9-203ENST00000399275 WNK1Q9H4A3 2382 aa7.14□□□□□ -1.27
SMAD9-203ENST00000399275 IGLV4-3A0A075B6K6 122 aa7.14□□□□□ -1.27
SMAD9-203ENST00000399275 C10orf142B7Z368 130 aa7.14□□□□□ -1.27
SMAD9-203ENST00000399275 PLA2G2CQ5R387 149 aa7.14□□□□□ -1.27
SMAD9-203ENST00000399275 SPTAN1Q13813 2472 aaKnown RBP7.14□□□□□ -1.27
SMAD9-203ENST00000399275 HIGD2AQ9BW72 106 aa7.14□□□□□ -1.27
SMAD9-203ENST00000399275 LINC00846Q9NV44 126 aa7.14□□□□□ -1.27
SMAD9-203ENST00000399275 CPAMD8Q8IZJ3 1885 aa7.14□□□□□ -1.27
SMAD9-203ENST00000399275 SORL1Q92673 2214 aa7.13□□□□□ -1.27
SMAD9-203ENST00000399275 USF3Q68DE3 2245 aa7.13□□□□□ -1.27
SMAD9-203ENST00000399275 K7EMT4 169 aa7.13□□□□□ -1.27
SMAD9-203ENST00000399275 MED13Q9UHV7 2174 aa7.13□□□□□ -1.27
SMAD9-203ENST00000399275 BCE1O60756 84 aa7.13□□□□□ -1.27
SMAD9-203ENST00000399275 A0A0J9YX75 114 aa7.12□□□□□ -1.27
SMAD9-203ENST00000399275 TNFRSF13BO14836 293 aaPredicted RBP7.12□□□□□ -1.27
SMAD9-203ENST00000399275 ROS1P08922 2347 aa7.11□□□□□ -1.27
SMAD9-203ENST00000399275 CENPFP49454 3210 aa7.11□□□□□ -1.27
SMAD9-203ENST00000399275 MSMBP08118 114 aa7.11□□□□□ -1.27
SMAD9-203ENST00000399275 GYPEP15421 78 aa7.11□□□□□ -1.27
SMAD9-203ENST00000399275 C5orf56Q8N8D9 126 aa7.11□□□□□ -1.27
SMAD9-203ENST00000399275 C7orf65Q6ZTY9 151 aa7.11□□□□□ -1.27
SMAD9-203ENST00000399275 RPL28P46779 137 aaKnown RBP7.11□□□□□ -1.27
SMAD9-203ENST00000399275 FSTL3O95633 263 aa7.1□□□□□ -1.27
SMAD9-203ENST00000399275 SMAD5-AS1Q9Y6J3 95 aa7.1□□□□□ -1.27
SMAD9-203ENST00000399275 COL6A6A6NMZ7 2263 aa7.1□□□□□ -1.27
SMAD9-203ENST00000399275 IGF1P05019 195 aa7.1□□□□□ -1.27
SMAD9-203ENST00000399275 PCOTHQ58A44 107 aa7.1□□□□□ -1.27
SMAD9-203ENST00000399275 CUL9Q8IWT3 2517 aa7.1□□□□□ -1.27
SMAD9-203ENST00000399275 Q6ZVQ6 151 aa7.1□□□□□ -1.27
SMAD9-203ENST00000399275 SBSPONQ8IVN8 264 aa7.1□□□□□ -1.27
SMAD9-203ENST00000399275 LINC01356Q8N9X3 169 aa7.1□□□□□ -1.27
SMAD9-203ENST00000399275 CACNA1BQ00975 2339 aa7.1□□□□□ -1.27
SMAD9-203ENST00000399275 A0A096LNI7 61 aa7.09□□□□□ -1.27
SMAD9-203ENST00000399275 A0A096LNJ9 63 aa7.09□□□□□ -1.27
SMAD9-203ENST00000399275 ODF3BA8MYP8 253 aa7.09□□□□□ -1.27
SMAD9-203ENST00000399275 MED12LQ86YW9 2145 aa7.09□□□□□ -1.27
SMAD9-203ENST00000399275 BPTFQ12830 3046 aa7.09□□□□□ -1.27
SMAD9-203ENST00000399275 ZFAND2AQ8N6M9 145 aa7.09□□□□□ -1.27
SMAD9-203ENST00000399275 CCDC140Q96MF4 163 aa7.09□□□□□ -1.27
SMAD9-203ENST00000399275 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.09□□□□□ -1.27
SMAD9-203ENST00000399275 COX8CQ7Z4L0 72 aa7.09□□□□□ -1.27
SMAD9-203ENST00000399275 COL5A1P20908 1838 aaPredicted RBP7.09□□□□□ -1.28
SMAD9-203ENST00000399275 H0Y9P7 68 aa7.08□□□□□ -1.28
SMAD9-203ENST00000399275 LY6LH3BQJ8 138 aa7.08□□□□□ -1.28
SMAD9-203ENST00000399275 LINC01547P58512 204 aaPredicted RBP7.08□□□□□ -1.28
SMAD9-203ENST00000399275 C2orf48Q96LS8 159 aa7.08□□□□□ -1.28
SMAD9-203ENST00000399275 ATP11AUNQ6ZP68 121 aa7.08□□□□□ -1.28
SMAD9-203ENST00000399275 DCANP1Q8TF63 244 aa7.08□□□□□ -1.28
SMAD9-203ENST00000399275 GPHB5Q86YW7 130 aa7.07□□□□□ -1.28
SMAD9-203ENST00000399275 A0A1B0GU69 56 aa7.07□□□□□ -1.28
SMAD9-203ENST00000399275 SMCPP49901 116 aaPredicted RBP7.07□□□□□ -1.28
SMAD9-203ENST00000399275 XAGE1AQ9HD64 81 aa7.07□□□□□ -1.28
SMAD9-203ENST00000399275 LINC00467Q9BRT7 94 aa7.07□□□□□ -1.28
SMAD9-203ENST00000399275 Q9UF83 564 aa7.06□□□□□ -1.28
SMAD9-203ENST00000399275 PRR14LQ5THK1 2151 aa7.06□□□□□ -1.28
SMAD9-203ENST00000399275 PIP4P1Q86T03 277 aa7.06□□□□□ -1.28
SMAD9-203ENST00000399275 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
SMAD9-203ENST00000399275 PRO0461Q9UI25 63 aa7.06□□□□□ -1.28
SMAD9-203ENST00000399275 PTPRQQ9UMZ3 2332 aa7.06□□□□□ -1.28
SMAD9-203ENST00000399275 A8MUN3 132 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms