RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PPDPFQ9H3Y8 114 aa10.58□□□□□ -0.72
PCDHA11-201ENST00000398640 CFAP126Q5VTH2 177 aa10.57□□□□□ -0.72
PCDHA11-201ENST00000398640 Q8N976 141 aa10.57□□□□□ -0.72
PCDHA11-201ENST00000398640 CDKN2A-AS1Q9UH64 79 aa10.57□□□□□ -0.72
PCDHA11-201ENST00000398640 BPY2O14599 106 aa10.57□□□□□ -0.72
PCDHA11-201ENST00000398640 TAX1BP3O14907 124 aa10.57□□□□□ -0.72
PCDHA11-201ENST00000398640 Q6ZS46 218 aa10.57□□□□□ -0.72
PCDHA11-201ENST00000398640 CLUHP3Q96NS8 147 aa10.57□□□□□ -0.72
PCDHA11-201ENST00000398640 TRAV23DV6A0A075B6W5 121 aa10.56□□□□□ -0.72
PCDHA11-201ENST00000398640 LINC00526Q96FQ7 95 aa10.56□□□□□ -0.72
PCDHA11-201ENST00000398640 RETNQ9HD89 108 aa10.56□□□□□ -0.72
PCDHA11-201ENST00000398640 ODF3Q96PU9 254 aa10.56□□□□□ -0.72
PCDHA11-201ENST00000398640 PIK3CD-AS1Q5SR53 167 aa10.55□□□□□ -0.72
PCDHA11-201ENST00000398640 C16orf95Q9H693 158 aa10.55□□□□□ -0.72
PCDHA11-201ENST00000398640 IGKV2-28A0A075B6P5 120 aa10.55□□□□□ -0.72
PCDHA11-201ENST00000398640 TCL1BO95988 128 aa10.55□□□□□ -0.72
PCDHA11-201ENST00000398640 IGKV2D-28P01615 120 aa10.55□□□□□ -0.72
PCDHA11-201ENST00000398640 PRM2P04554 102 aa10.55□□□□□ -0.72
PCDHA11-201ENST00000398640 SPINK6Q6UWN8 80 aa10.55□□□□□ -0.72
PCDHA11-201ENST00000398640 UPK3BQ9BT76 320 aa10.55□□□□□ -0.72
PCDHA11-201ENST00000398640 TRBV6-8A0A0A6YYG3 113 aa10.55□□□□□ -0.72
PCDHA11-201ENST00000398640 CACNA1AO00555 2505 aa10.54□□□□□ -0.72
PCDHA11-201ENST00000398640 IGLV2-8P01709 118 aa10.54□□□□□ -0.72
PCDHA11-201ENST00000398640 UBE2D3P61077 147 aa10.54□□□□□ -0.72
PCDHA11-201ENST00000398640 Q8N6K4 173 aa10.54□□□□□ -0.72
PCDHA11-201ENST00000398640 NCOA6Q14686 2063 aaPredicted RBP10.54□□□□□ -0.72
PCDHA11-201ENST00000398640 PRRC2AP48634 2157 aaKnown RBP10.54□□□□□ -0.72
PCDHA11-201ENST00000398640 DSCAML1Q8TD84 2053 aa10.53□□□□□ -0.72
PCDHA11-201ENST00000398640 WFDC10BQ8IUB3 73 aa10.53□□□□□ -0.72
PCDHA11-201ENST00000398640 LOC100131303A0A0U1RQF7 123 aa10.53□□□□□ -0.72
PCDHA11-201ENST00000398640 PCNX3Q9H6A9 2034 aa10.53□□□□□ -0.72
PCDHA11-201ENST00000398640 A0A1B0GXF2 115 aa10.53□□□□□ -0.72
PCDHA11-201ENST00000398640 IGHV4-30-4P0DP06 118 aa10.53□□□□□ -0.72
PCDHA11-201ENST00000398640 SYCNQ0VAF6 134 aa10.53□□□□□ -0.72
PCDHA11-201ENST00000398640 ATG2AQ2TAZ0 1938 aa10.52□□□□□ -0.73
PCDHA11-201ENST00000398640 H3BT86 120 aa10.52□□□□□ -0.73
PCDHA11-201ENST00000398640 CRIP3Q6Q6R5 217 aa10.52□□□□□ -0.73
PCDHA11-201ENST00000398640 IGLV4-3A0A075B6K6 122 aa10.52□□□□□ -0.73
PCDHA11-201ENST00000398640 IGLC6P0CF74 106 aa10.52□□□□□ -0.73
PCDHA11-201ENST00000398640 ZFAND3Q9H8U3 227 aa10.52□□□□□ -0.73
PCDHA11-201ENST00000398640 H7C423 109 aa10.5□□□□□ -0.73
PCDHA11-201ENST00000398640 IGLV1-40P01703 118 aa10.5□□□□□ -0.73
PCDHA11-201ENST00000398640 SPATA12Q7Z6I5 190 aa10.5□□□□□ -0.73
PCDHA11-201ENST00000398640 NUPR2A6NF83 97 aa10.5□□□□□ -0.73
PCDHA11-201ENST00000398640 TMEM223A0PJW6 202 aa10.5□□□□□ -0.73
PCDHA11-201ENST00000398640 A8MZ25 164 aa10.5□□□□□ -0.73
PCDHA11-201ENST00000398640 PDE6GP18545 87 aa10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 SDIM1Q6ZPB5 146 aa10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 C1orf158Q8N1D5 194 aa10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 KIAA1549Q9HCM3 1950 aa10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 RNASE8Q8TDE3 154 aaKnown RBP10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 SPG11Q96JI7 2443 aa10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 IGLV9-49A0A0B4J1Y8 123 aa10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 M0QY20 66 aa10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 BRI3O95415 125 aa10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 SMIM20Q8N5G0 67 aa10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 SVIPQ8NHG7 77 aa10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 RPL37AP8A6NKH3 93 aa10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 ZNF22P17026 224 aaPredicted RBP10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 CRIP1P50238 77 aa10.49□□□□□ -0.73
PCDHA11-201ENST00000398640 USP17L23D6RBM5 183 aa10.48□□□□□ -0.73
PCDHA11-201ENST00000398640 TRBV6-4A0A1B0GX49 114 aa10.48□□□□□ -0.73
PCDHA11-201ENST00000398640 EIF4EBP1Q13541 118 aaPredicted RBP10.48□□□□□ -0.73
PCDHA11-201ENST00000398640 C3orf84H3BNL1 204 aa10.47□□□□□ -0.73
PCDHA11-201ENST00000398640 TEX49A0A1B0GTD5 131 aa10.47□□□□□ -0.73
PCDHA11-201ENST00000398640 MLST8Q9BVC4 326 aa10.47□□□□□ -0.73
PCDHA11-201ENST00000398640 LINC00308Q8TCZ7 52 aa10.46□□□□□ -0.73
PCDHA11-201ENST00000398640 RBX1P62877 108 aa10.46□□□□□ -0.74
PCDHA11-201ENST00000398640 C6orf99Q4VX62 202 aa10.46□□□□□ -0.74
PCDHA11-201ENST00000398640 ENHOQ6UWT2 76 aa10.45□□□□□ -0.74
PCDHA11-201ENST00000398640 NDUFC2O95298 119 aa10.45□□□□□ -0.74
PCDHA11-201ENST00000398640 IBA57-AS1B1ANH7 110 aa10.45□□□□□ -0.74
PCDHA11-201ENST00000398640 EDN2P20800 178 aa10.45□□□□□ -0.74
PCDHA11-201ENST00000398640 SPANXB1Q9NS25 103 aaPredicted RBP10.45□□□□□ -0.74
PCDHA11-201ENST00000398640 PLAC8L1A1L4L8 177 aa10.44□□□□□ -0.74
PCDHA11-201ENST00000398640 PTPRBP23467 1997 aa10.44□□□□□ -0.74
PCDHA11-201ENST00000398640 MPLKIPQ8TAP9 179 aa10.44□□□□□ -0.74
PCDHA11-201ENST00000398640 RAI1Q7Z5J4 1906 aaPredicted RBP10.43□□□□□ -0.74
PCDHA11-201ENST00000398640 MAPKAPK5-AS1Q8N8E1 139 aa10.43□□□□□ -0.74
PCDHA11-201ENST00000398640 SPTSSBQ8NFR3 76 aa10.43□□□□□ -0.74
PCDHA11-201ENST00000398640 UBE2D2P62837 147 aa10.43□□□□□ -0.74
PCDHA11-201ENST00000398640 RNF185Q96GF1 192 aa10.43□□□□□ -0.74
PCDHA11-201ENST00000398640 G3V4G9 280 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 CCKP06307 115 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 LELP1Q5T871 98 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 U3KQK5 164 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 IGLV5-52A0A0A0MRZ9 124 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 LOC107984640A0A0U1RRK4 108 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 PRR9Q5T870 116 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 LINC00643Q86TS7 51 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 CSPG4Q6UVK1 2322 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 NAV2Q8IVL1 2488 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 TANC2Q9HCD6 1990 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 J3KT08 172 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 ZNF706Q9Y5V0 76 aaPredicted RBP10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 WNK1Q9H4A3 2382 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 C3orf22Q8N5N4 141 aa10.42□□□□□ -0.74
PCDHA11-201ENST00000398640 BRK1Q8WUW1 75 aa10.41□□□□□ -0.74
PCDHA11-201ENST00000398640 TRIAP1O43715 76 aa10.4□□□□□ -0.74
PCDHA11-201ENST00000398640 C20orf197Q8N268 126 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms