RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 CRPP02741 224 aa16.99■□□□□ 0.31
U2AF1-203ENST00000398137 ZNF25P17030 456 aaPredicted RBP16.98■□□□□ 0.31
U2AF1-203ENST00000398137 RPL39P62891 51 aaKnown RBP16.98■□□□□ 0.31
U2AF1-203ENST00000398137 ENHOQ6UWT2 76 aa16.98■□□□□ 0.31
U2AF1-203ENST00000398137 MRPL52Q86TS9 123 aaKnown RBP16.97■□□□□ 0.31
U2AF1-203ENST00000398137 PRSS3P2Q8NHM4 247 aa16.97■□□□□ 0.31
U2AF1-203ENST00000398137 TMEM18Q96B42 140 aa16.97■□□□□ 0.31
U2AF1-203ENST00000398137 LCE2DQ5TA82 110 aaPredicted RBP16.96■□□□□ 0.31
U2AF1-203ENST00000398137 OR5A1Q8NGJ0 315 aa16.96■□□□□ 0.31
U2AF1-203ENST00000398137 TMEM101Q96IK0 257 aa16.96■□□□□ 0.31
U2AF1-203ENST00000398137 PRR34Q9NV39 138 aa16.96■□□□□ 0.31
U2AF1-203ENST00000398137 Q0VG73 95 aa16.95■□□□□ 0.3
U2AF1-203ENST00000398137 C18orf32Q8TCD1 76 aa16.95■□□□□ 0.3
U2AF1-203ENST00000398137 UBE2D4Q9Y2X8 147 aa16.95■□□□□ 0.3
U2AF1-203ENST00000398137 REG3AQ06141 175 aa16.94■□□□□ 0.3
U2AF1-203ENST00000398137 IGKV2D-24A0A075B6R9 120 aa16.93■□□□□ 0.3
U2AF1-203ENST00000398137 TRGC2P03986 189 aa16.93■□□□□ 0.3
U2AF1-203ENST00000398137 SMAGPQ0VAQ4 97 aa16.93■□□□□ 0.3
U2AF1-203ENST00000398137 ORMDL2Q53FV1 153 aa16.93■□□□□ 0.3
U2AF1-203ENST00000398137 K7EMI3 77 aa16.92■□□□□ 0.3
U2AF1-203ENST00000398137 PSCAO43653 123 aa16.92■□□□□ 0.3
U2AF1-203ENST00000398137 DGAT2L7PQ6IED9 249 aa16.92■□□□□ 0.3
U2AF1-203ENST00000398137 FA2HQ7L5A8 372 aa16.92■□□□□ 0.3
U2AF1-203ENST00000398137 RMI2Q96E14 147 aa16.92■□□□□ 0.3
U2AF1-203ENST00000398137 IGKV3OR2-268A0A0C4DH90 116 aa16.91■□□□□ 0.3
U2AF1-203ENST00000398137 FUSP35637 526 aaKnown RBP eCLIP16.91■□□□□ 0.3
U2AF1-203ENST00000398137 MIAQ16674 131 aa16.91■□□□□ 0.3
U2AF1-203ENST00000398137 TIMM21Q9BVV7 248 aa16.91■□□□□ 0.3
U2AF1-203ENST00000398137 TM2D2Q9BX73 214 aa16.91■□□□□ 0.3
U2AF1-203ENST00000398137 Q6ZUT4 128 aa16.9■□□□□ 0.3
U2AF1-203ENST00000398137 C1orf43Q9BWL3 253 aa16.9■□□□□ 0.3
U2AF1-203ENST00000398137 RNASE13Q5GAN3 156 aaKnown RBP16.89■□□□□ 0.29
U2AF1-203ENST00000398137 C2orf66Q6UXQ4 117 aa16.89■□□□□ 0.29
U2AF1-203ENST00000398137 CDC42SE2Q9NRR3 84 aa16.89■□□□□ 0.29
U2AF1-203ENST00000398137 SPANXA1Q9NS26 97 aa16.89■□□□□ 0.29
U2AF1-203ENST00000398137 CYSLTR1Q9Y271 337 aa16.89■□□□□ 0.29
U2AF1-203ENST00000398137 CSDC2Q9Y534 153 aaKnown RBP16.89■□□□□ 0.29
U2AF1-203ENST00000398137 IGLV10-54A0A075B6I4 117 aa16.88■□□□□ 0.29
U2AF1-203ENST00000398137 LINC01546A6NGU7 62 aa16.88■□□□□ 0.29
U2AF1-203ENST00000398137 ZNF664Q8N3J9 261 aa16.88■□□□□ 0.29
U2AF1-203ENST00000398137 MAPKAPK5-AS1Q8N8E1 139 aa16.87■□□□□ 0.29
U2AF1-203ENST00000398137 URB1-AS1Q96HZ7 61 aa16.86■□□□□ 0.29
U2AF1-203ENST00000398137 COX11Q9Y6N1 276 aa16.86■□□□□ 0.29
U2AF1-203ENST00000398137 OPRPNQ99935 248 aaPredicted RBP16.85■□□□□ 0.29
U2AF1-203ENST00000398137 FAM104AQ969W3 186 aa16.84■□□□□ 0.29
U2AF1-203ENST00000398137 AP5S1Q9NUS5 200 aa16.84■□□□□ 0.29
U2AF1-203ENST00000398137 A0A087WTM6 91 aa16.83■□□□□ 0.28
U2AF1-203ENST00000398137 TRAV8-4A0A0B4J246 113 aa16.83■□□□□ 0.28
U2AF1-203ENST00000398137 LINC00614P0C842 121 aa16.82■□□□□ 0.28
U2AF1-203ENST00000398137 G0S2P27469 103 aa16.82■□□□□ 0.28
U2AF1-203ENST00000398137 MRPS36P82909 103 aaKnown RBP16.82■□□□□ 0.28
U2AF1-203ENST00000398137 TOMM6Q96B49 74 aa16.82■□□□□ 0.28
U2AF1-203ENST00000398137 PYGO1Q9Y3Y4 419 aa16.82■□□□□ 0.28
U2AF1-203ENST00000398137 RAB5BP61020 215 aa16.81■□□□□ 0.28
U2AF1-203ENST00000398137 KRTAP26-1Q6PEX3 210 aa16.81■□□□□ 0.28
U2AF1-203ENST00000398137 Q8N1X5 172 aa16.81■□□□□ 0.28
U2AF1-203ENST00000398137 IGLV4-3A0A075B6K6 122 aa16.8■□□□□ 0.28
U2AF1-203ENST00000398137 LINC00959A0A1B0GUT2 108 aa16.8■□□□□ 0.28
U2AF1-203ENST00000398137 BAALCQ8WXS3 180 aa16.8■□□□□ 0.28
U2AF1-203ENST00000398137 PGPEP1Q9NXJ5 209 aa16.8■□□□□ 0.28
U2AF1-203ENST00000398137 LRCOL1A6NCL2 159 aa16.79■□□□□ 0.28
U2AF1-203ENST00000398137 LECT2O14960 151 aa16.79■□□□□ 0.28
U2AF1-203ENST00000398137 WFDC2Q14508 124 aa16.79■□□□□ 0.28
U2AF1-203ENST00000398137 CHCHD10Q8WYQ3 142 aaPredicted RBP16.79■□□□□ 0.28
U2AF1-203ENST00000398137 TRAV13-1A0A0B4J241 112 aa16.78■□□□□ 0.28
U2AF1-203ENST00000398137 IGIPA6NJ69 53 aa16.78■□□□□ 0.28
U2AF1-203ENST00000398137 PMCHL1Q16048 86 aa16.78■□□□□ 0.28
U2AF1-203ENST00000398137 BAGE3Q86Y29 109 aa16.78■□□□□ 0.28
U2AF1-203ENST00000398137 TMEM141Q96I45 108 aa16.78■□□□□ 0.28
U2AF1-203ENST00000398137 FAT1Q14517 4588 aa16.77■□□□□ 0.28
U2AF1-203ENST00000398137 GAGE12HA6NDE8 117 aa16.77■□□□□ 0.28
U2AF1-203ENST00000398137 SS18Q15532 418 aa16.77■□□□□ 0.28
U2AF1-203ENST00000398137 A0A096LNJ9 63 aa16.76■□□□□ 0.27
U2AF1-203ENST00000398137 IFITM10A6NMD0 228 aa16.76■□□□□ 0.27
U2AF1-203ENST00000398137 CCL25O15444 150 aa16.76■□□□□ 0.27
U2AF1-203ENST00000398137 XCL1P47992 114 aa16.76■□□□□ 0.27
U2AF1-203ENST00000398137 SCGB3A1Q96QR1 104 aa16.76■□□□□ 0.27
U2AF1-203ENST00000398137 EREGO14944 169 aa16.75■□□□□ 0.27
U2AF1-203ENST00000398137 CHCHD1Q96BP2 118 aaKnown RBP16.75■□□□□ 0.27
U2AF1-203ENST00000398137 TIMM17AQ99595 171 aa16.75■□□□□ 0.27
U2AF1-203ENST00000398137 HBDP02042 147 aa16.74■□□□□ 0.27
U2AF1-203ENST00000398137 KRTAP10-1P60331 282 aa16.74■□□□□ 0.27
U2AF1-203ENST00000398137 CDPF1Q6NVV7 123 aa16.74■□□□□ 0.27
U2AF1-203ENST00000398137 Q6ZN92 141 aa16.74■□□□□ 0.27
U2AF1-203ENST00000398137 ERASQ7Z444 233 aa16.74■□□□□ 0.27
U2AF1-203ENST00000398137 LINC01549A6NIU2 74 aa16.73■□□□□ 0.27
U2AF1-203ENST00000398137 NPSP0C0P6 89 aa16.73■□□□□ 0.27
U2AF1-203ENST00000398137 XGP55808 180 aa16.73■□□□□ 0.27
U2AF1-203ENST00000398137 ZC2HC1BQ5TFG8 222 aa16.73■□□□□ 0.27
U2AF1-203ENST00000398137 TEX43Q6ZNM6 134 aa16.73■□□□□ 0.27
U2AF1-203ENST00000398137 LINC00173Q6ZV60 143 aa16.72■□□□□ 0.27
U2AF1-203ENST00000398137 C1orf196B1AJZ1 125 aa16.71■□□□□ 0.27
U2AF1-203ENST00000398137 USP17L23D6RBM5 183 aa16.71■□□□□ 0.27
U2AF1-203ENST00000398137 SERF1AO75920 110 aa16.71■□□□□ 0.27
U2AF1-203ENST00000398137 LINC00310P59036 64 aa16.71■□□□□ 0.27
U2AF1-203ENST00000398137 FOXI1Q12951 378 aa16.71■□□□□ 0.27
U2AF1-203ENST00000398137 VCX2Q9H322 139 aa16.71■□□□□ 0.27
U2AF1-203ENST00000398137 HIST1H2BKO60814 126 aa16.7■□□□□ 0.26
U2AF1-203ENST00000398137 HIST1H2BJP06899 126 aa16.7■□□□□ 0.26
U2AF1-203ENST00000398137 HIST1H2BOP23527 126 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms