RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 A0A0J9YXV3 536 aa13.33□□□□□ -0.28
CHRFAM7A-202ENST00000397827 J3QQQ9 107 aa13.32□□□□□ -0.28
CHRFAM7A-202ENST00000397827 C11orf72Q8NBR9 251 aa13.32□□□□□ -0.28
CHRFAM7A-202ENST00000397827 TMEM126AQ9H061 195 aa13.32□□□□□ -0.28
CHRFAM7A-202ENST00000397827 ODF3L2Q3SX64 289 aa13.32□□□□□ -0.28
CHRFAM7A-202ENST00000397827 RNASE13Q5GAN3 156 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-202ENST00000397827 TMEM86BQ8N661 226 aa13.32□□□□□ -0.28
CHRFAM7A-202ENST00000397827 ITPR2Q14571 2701 aa13.31□□□□□ -0.28
CHRFAM7A-202ENST00000397827 IGHV3OR16-12A0A075B7B8 117 aa13.31□□□□□ -0.28
CHRFAM7A-202ENST00000397827 NTN5Q8WTR8 489 aaPredicted RBP13.31□□□□□ -0.28
CHRFAM7A-202ENST00000397827 AMELXQ99217 191 aa13.31□□□□□ -0.28
CHRFAM7A-202ENST00000397827 CHCHD5Q9BSY4 110 aa13.31□□□□□ -0.28
CHRFAM7A-202ENST00000397827 C5orf47Q569G3 176 aa13.31□□□□□ -0.28
CHRFAM7A-202ENST00000397827 EDA2RQ9HAV5 297 aa13.31□□□□□ -0.28
CHRFAM7A-202ENST00000397827 TMEM223A0PJW6 202 aa13.3□□□□□ -0.28
CHRFAM7A-202ENST00000397827 INSP01308 110 aa13.3□□□□□ -0.28
CHRFAM7A-202ENST00000397827 ZNF22P17026 224 aaPredicted RBP13.3□□□□□ -0.28
CHRFAM7A-202ENST00000397827 LGALS3P17931 250 aaKnown RBP13.3□□□□□ -0.28
CHRFAM7A-202ENST00000397827 FAM104AQ969W3 186 aa13.3□□□□□ -0.28
CHRFAM7A-202ENST00000397827 TRAV8-4A0A0B4J246 113 aa13.29□□□□□ -0.28
CHRFAM7A-202ENST00000397827 IGHV3-38A0A0C4DH36 116 aa13.29□□□□□ -0.28
CHRFAM7A-202ENST00000397827 PDZD2O15018 2839 aa13.29□□□□□ -0.28
CHRFAM7A-202ENST00000397827 CCL24O00175 119 aa13.28□□□□□ -0.28
CHRFAM7A-202ENST00000397827 SETXQ7Z333 2677 aaKnown RBP13.28□□□□□ -0.28
CHRFAM7A-202ENST00000397827 LINC00694P0DN24 101 aa13.28□□□□□ -0.28
CHRFAM7A-202ENST00000397827 SPXQ9BT56 116 aa13.28□□□□□ -0.28
CHRFAM7A-202ENST00000397827 STHQ8IWL8 128 aa13.27□□□□□ -0.28
CHRFAM7A-202ENST00000397827 SLC25A29Q8N8R3 303 aa13.27□□□□□ -0.28
CHRFAM7A-202ENST00000397827 CITED2Q99967 270 aaPredicted RBP13.27□□□□□ -0.28
CHRFAM7A-202ENST00000397827 CFC1BP0CG36 223 aa13.27□□□□□ -0.29
CHRFAM7A-202ENST00000397827 CFC1P0CG37 223 aa13.27□□□□□ -0.29
CHRFAM7A-202ENST00000397827 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.26□□□□□ -0.29
CHRFAM7A-202ENST00000397827 LOC107984640A0A0U1RRK4 108 aa13.26□□□□□ -0.29
CHRFAM7A-202ENST00000397827 IGKV2-29A2NJV5 120 aaPredicted RBP13.26□□□□□ -0.29
CHRFAM7A-202ENST00000397827 IGHV3-30P01768 117 aa13.26□□□□□ -0.29
CHRFAM7A-202ENST00000397827 IGHV3-30-5P0DP03 117 aa13.26□□□□□ -0.29
CHRFAM7A-202ENST00000397827 C10orf126Q8N4M7 172 aa13.26□□□□□ -0.29
CHRFAM7A-202ENST00000397827 TEX49A0A1B0GTD5 131 aa13.26□□□□□ -0.29
CHRFAM7A-202ENST00000397827 LEPROTO15243 131 aa13.26□□□□□ -0.29
CHRFAM7A-202ENST00000397827 CHCHD7Q9BUK0 85 aa13.26□□□□□ -0.29
CHRFAM7A-202ENST00000397827 PYGO1Q9Y3Y4 419 aa13.26□□□□□ -0.29
CHRFAM7A-202ENST00000397827 PIK3CD-AS1Q5SR53 167 aa13.25□□□□□ -0.29
CHRFAM7A-202ENST00000397827 C1orf158Q8N1D5 194 aa13.25□□□□□ -0.29
CHRFAM7A-202ENST00000397827 IGHV3-53P01767 116 aa13.24□□□□□ -0.29
CHRFAM7A-202ENST00000397827 DNAJC30Q96LL9 226 aa13.24□□□□□ -0.29
CHRFAM7A-202ENST00000397827 ANK3Q12955 4377 aaKnown RBP13.24□□□□□ -0.29
CHRFAM7A-202ENST00000397827 BEAN1Q3B7T3 259 aa13.24□□□□□ -0.29
CHRFAM7A-202ENST00000397827 LINC00467Q9BRT7 94 aa13.24□□□□□ -0.29
CHRFAM7A-202ENST00000397827 PRO1854Q9UHT4 67 aa13.24□□□□□ -0.29
CHRFAM7A-202ENST00000397827 C2CD3Q4AC94 2353 aa13.23□□□□□ -0.29
CHRFAM7A-202ENST00000397827 ADARB2-AS1A8MUL3 147 aa13.23□□□□□ -0.29
CHRFAM7A-202ENST00000397827 H7C2G1 150 aa13.23□□□□□ -0.29
CHRFAM7A-202ENST00000397827 UBE2D4Q9Y2X8 147 aa13.23□□□□□ -0.29
CHRFAM7A-202ENST00000397827 HELZ2Q9BYK8 2649 aaKnown RBP13.23□□□□□ -0.29
CHRFAM7A-202ENST00000397827 TRAV8-3A0A0A6YYJ7 113 aa13.22□□□□□ -0.29
CHRFAM7A-202ENST00000397827 KRTAP1-1Q07627 177 aa13.22□□□□□ -0.29
CHRFAM7A-202ENST00000397827 RS1O15537 224 aa13.22□□□□□ -0.29
CHRFAM7A-202ENST00000397827 LINC01006Q8NI28 216 aa13.22□□□□□ -0.29
CHRFAM7A-202ENST00000397827 TRGV1A0A0A0MS02 117 aa13.21□□□□□ -0.29
CHRFAM7A-202ENST00000397827 TRAV25A0A0B4J276 109 aa13.21□□□□□ -0.29
CHRFAM7A-202ENST00000397827 MRPS36P82909 103 aaKnown RBP13.21□□□□□ -0.29
CHRFAM7A-202ENST00000397827 SMIM9A6NGZ8 99 aa13.21□□□□□ -0.29
CHRFAM7A-202ENST00000397827 IGHV3-30-3P0DP02 117 aa13.21□□□□□ -0.29
CHRFAM7A-202ENST00000397827 MRPL23Q16540 153 aaKnown RBP13.2□□□□□ -0.3
CHRFAM7A-202ENST00000397827 TIMM21Q9BVV7 248 aa13.2□□□□□ -0.3
CHRFAM7A-202ENST00000397827 WFDC10AQ9H1F0 79 aa13.2□□□□□ -0.3
CHRFAM7A-202ENST00000397827 A8MZ25 164 aa13.19□□□□□ -0.3
CHRFAM7A-202ENST00000397827 A4D1N5 150 aa13.18□□□□□ -0.3
CHRFAM7A-202ENST00000397827 Q6ZTI0 123 aa13.18□□□□□ -0.3
CHRFAM7A-202ENST00000397827 A0A0J9YXY3 114 aa13.17□□□□□ -0.3
CHRFAM7A-202ENST00000397827 LINC01620Q4KN68 170 aa13.17□□□□□ -0.3
CHRFAM7A-202ENST00000397827 C9orf153Q5TBE3 101 aa13.17□□□□□ -0.3
CHRFAM7A-202ENST00000397827 MUSTN1Q8IVN3 82 aa13.17□□□□□ -0.3
CHRFAM7A-202ENST00000397827 UBE2WQ96B02 151 aa13.16□□□□□ -0.3
CHRFAM7A-202ENST00000397827 UNC79Q9P2D8 2635 aa13.16□□□□□ -0.3
CHRFAM7A-202ENST00000397827 EIF4EBP3O60516 100 aaPredicted RBP13.16□□□□□ -0.3
CHRFAM7A-202ENST00000397827 RPL13AP40429 203 aaKnown RBP13.16□□□□□ -0.3
CHRFAM7A-202ENST00000397827 IL17DQ8TAD2 202 aa13.16□□□□□ -0.3
CHRFAM7A-202ENST00000397827 FAM19A5Q7Z5A7 132 aaPredicted RBP13.15□□□□□ -0.3
CHRFAM7A-202ENST00000397827 IGHV1-58A0A0C4DH39 117 aa13.15□□□□□ -0.31
CHRFAM7A-202ENST00000397827 TINCRA0A1B0GVN0 87 aa13.15□□□□□ -0.31
CHRFAM7A-202ENST00000397827 ATXN8Q156A1 80 aa13.15□□□□□ -0.31
CHRFAM7A-202ENST00000397827 RNASE1P07998 156 aaKnown RBP13.14□□□□□ -0.31
CHRFAM7A-202ENST00000397827 Q1RN00 199 aa13.14□□□□□ -0.31
CHRFAM7A-202ENST00000397827 KLK5Q9Y337 293 aaPredicted RBP13.14□□□□□ -0.31
CHRFAM7A-202ENST00000397827 FAM236AA0A1B0GUQ0 79 aa13.14□□□□□ -0.31
CHRFAM7A-202ENST00000397827 FAM236BA0A1B0GV22 79 aa13.14□□□□□ -0.31
CHRFAM7A-202ENST00000397827 IGHV3-33P01772 117 aa13.14□□□□□ -0.31
CHRFAM7A-202ENST00000397827 NOP10Q9NPE3 64 aaKnown RBP13.14□□□□□ -0.31
CHRFAM7A-202ENST00000397827 FASNP49327 2511 aaKnown RBP13.13□□□□□ -0.31
CHRFAM7A-202ENST00000397827 NDUFA7O95182 113 aa13.13□□□□□ -0.31
CHRFAM7A-202ENST00000397827 GIG44P09565 113 aaPredicted RBP13.13□□□□□ -0.31
CHRFAM7A-202ENST00000397827 RPL35AP18077 110 aaKnown RBP13.13□□□□□ -0.31
CHRFAM7A-202ENST00000397827 HERVK_113P63121 156 aa13.13□□□□□ -0.31
CHRFAM7A-202ENST00000397827 DGAT2L7PQ6IED9 249 aa13.13□□□□□ -0.31
CHRFAM7A-202ENST00000397827 TMEM263Q8WUH6 116 aaKnown RBP13.13□□□□□ -0.31
CHRFAM7A-202ENST00000397827 VSIG2Q96IQ7 327 aa13.12□□□□□ -0.31
CHRFAM7A-202ENST00000397827 NDUFA12Q9UI09 145 aa13.12□□□□□ -0.31
CHRFAM7A-202ENST00000397827 CDKN2A-AS1Q9UH64 79 aa13.12□□□□□ -0.31
CHRFAM7A-202ENST00000397827 TRBV10-2A0A0K0K1G8 114 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms