RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 AGRNO00468 2067 aa8.08□□□□□ -1.12
CCDC40-204ENST00000397545 A0A0J9YXY3 114 aa8.08□□□□□ -1.12
CCDC40-204ENST00000397545 TRACP01848 142 aa8.08□□□□□ -1.12
CCDC40-204ENST00000397545 PROK1P58294 105 aa8.08□□□□□ -1.12
CCDC40-204ENST00000397545 HERV-K104P63124 156 aa8.08□□□□□ -1.12
CCDC40-204ENST00000397545 ATP6V0E2Q8NHE4 81 aa8.08□□□□□ -1.12
CCDC40-204ENST00000397545 A6NDX4 124 aa8.08□□□□□ -1.12
CCDC40-204ENST00000397545 PRR9Q5T870 116 aa8.08□□□□□ -1.12
CCDC40-204ENST00000397545 NKAPP1Q8N9T2 125 aa8.08□□□□□ -1.12
CCDC40-204ENST00000397545 ORMDL1Q9P0S3 153 aa8.08□□□□□ -1.12
CCDC40-204ENST00000397545 A8MZ25 164 aa8.07□□□□□ -1.12
CCDC40-204ENST00000397545 F8WEM9 126 aa8.07□□□□□ -1.12
CCDC40-204ENST00000397545 PRM2P04554 102 aa8.07□□□□□ -1.12
CCDC40-204ENST00000397545 DEFB105AQ8NG35 78 aa8.07□□□□□ -1.12
CCDC40-204ENST00000397545 RNF183Q96D59 192 aa8.07□□□□□ -1.12
CCDC40-204ENST00000397545 NFE4Q86UQ8 179 aa8.07□□□□□ -1.12
CCDC40-204ENST00000397545 UBE2DNLQ8IWF7 75 aa8.07□□□□□ -1.12
CCDC40-204ENST00000397545 ATP5G1P05496 136 aa8.07□□□□□ -1.12
CCDC40-204ENST00000397545 COX7B2Q8TF08 81 aa8.07□□□□□ -1.12
CCDC40-204ENST00000397545 INSL3P51460 131 aa8.06□□□□□ -1.12
CCDC40-204ENST00000397545 A0A1B0GX51 115 aa8.06□□□□□ -1.12
CCDC40-204ENST00000397545 DAZ2Q13117 558 aaKnown RBP8.06□□□□□ -1.12
CCDC40-204ENST00000397545 DAZ4Q86SG3 579 aaKnown RBP8.06□□□□□ -1.12
CCDC40-204ENST00000397545 PIFOQ8TCI5 191 aa8.06□□□□□ -1.12
CCDC40-204ENST00000397545 DAZ3Q9NR90 486 aaKnown RBP8.06□□□□□ -1.12
CCDC40-204ENST00000397545 ZNF22P17026 224 aaPredicted RBP8.06□□□□□ -1.12
CCDC40-204ENST00000397545 Q6ZTI0 123 aa8.06□□□□□ -1.12
CCDC40-204ENST00000397545 U3KQK5 164 aa8.06□□□□□ -1.12
CCDC40-204ENST00000397545 RPL32P62910 135 aaKnown RBP8.05□□□□□ -1.12
CCDC40-204ENST00000397545 NRACQ8N912 160 aa8.05□□□□□ -1.12
CCDC40-204ENST00000397545 MGAM2Q2M2H8 2515 aa8.05□□□□□ -1.12
CCDC40-204ENST00000397545 LINC00467Q9BRT7 94 aa8.04□□□□□ -1.12
CCDC40-204ENST00000397545 IGLV4-3A0A075B6K6 122 aa8.04□□□□□ -1.12
CCDC40-204ENST00000397545 IGKV2D-24A0A075B6R9 120 aa8.04□□□□□ -1.12
CCDC40-204ENST00000397545 H3BT86 120 aa8.04□□□□□ -1.12
CCDC40-204ENST00000397545 DEFB113Q30KQ7 82 aa8.04□□□□□ -1.12
CCDC40-204ENST00000397545 Q6ZS46 218 aa8.04□□□□□ -1.12
CCDC40-204ENST00000397545 K7EQG2 157 aa8.04□□□□□ -1.12
CCDC40-204ENST00000397545 EBI3Q14213 229 aa8.04□□□□□ -1.12
CCDC40-204ENST00000397545 MRGPRG-AS1Q2M3A8 158 aa8.04□□□□□ -1.12
CCDC40-204ENST00000397545 WFDC11Q8NEX6 87 aa8.04□□□□□ -1.12
CCDC40-204ENST00000397545 H0YGX0 51 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 IGHV3-30P01768 117 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 IGHV3-33P01772 117 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 IGHV3-30-5P0DP03 117 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 CITED2Q99967 270 aaPredicted RBP8.03□□□□□ -1.12
CCDC40-204ENST00000397545 A0A0B4J2C4 111 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 ACYP1P07311 99 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 APOC4P55056 127 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 COX7A2LO14548 114 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 RNASE3P12724 160 aaKnown RBP8.03□□□□□ -1.12
CCDC40-204ENST00000397545 MIAQ16674 131 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 HHLA3Q9XRX5 114 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 IGHV4-28A0A0C4DH34 117 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 M0QY20 66 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 RBMY1FQ15415 496 aaKnown RBP8.03□□□□□ -1.12
CCDC40-204ENST00000397545 MRPL23Q16540 153 aaKnown RBP8.03□□□□□ -1.12
CCDC40-204ENST00000397545 MAP6D1Q9H9H5 199 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 CHD6Q8TD26 2715 aa8.03□□□□□ -1.12
CCDC40-204ENST00000397545 hADV29S1A0JD25 119 aa8.02□□□□□ -1.13
CCDC40-204ENST00000397545 RBM3P98179 157 aaKnown RBP8.02□□□□□ -1.13
CCDC40-204ENST00000397545 DEFB135Q30KP9 77 aa8.02□□□□□ -1.13
CCDC40-204ENST00000397545 RNF152Q8N8N0 203 aa8.02□□□□□ -1.13
CCDC40-204ENST00000397545 C16orf74Q96GX8 76 aa8.02□□□□□ -1.13
CCDC40-204ENST00000397545 C14orf132Q9NPU4 83 aa8.02□□□□□ -1.13
CCDC40-204ENST00000397545 PIK3CD-AS1Q5SR53 167 aa8.02□□□□□ -1.13
CCDC40-204ENST00000397545 NCR3O14931 201 aa8.01□□□□□ -1.13
CCDC40-204ENST00000397545 TRIAP1O43715 76 aa8.01□□□□□ -1.13
CCDC40-204ENST00000397545 A0A1W2PPR1 153 aa8.01□□□□□ -1.13
CCDC40-204ENST00000397545 PRB2P02812 416 aaPredicted RBP8.01□□□□□ -1.13
CCDC40-204ENST00000397545 MUC4Q99102 2169 aa8.01□□□□□ -1.13
CCDC40-204ENST00000397545 CAMK2N2Q96S95 79 aa8□□□□□ -1.13
CCDC40-204ENST00000397545 ASH1LQ9NR48 2969 aaKnown RBP8□□□□□ -1.13
CCDC40-204ENST00000397545 DCHS2Q6V1P9 2916 aa8□□□□□ -1.13
CCDC40-204ENST00000397545 CSMD1Q96PZ7 3565 aa8□□□□□ -1.13
CCDC40-204ENST00000397545 COL12A1Q99715 3063 aa8□□□□□ -1.13
CCDC40-204ENST00000397545 KLK12Q9UKR0 248 aa8□□□□□ -1.13
CCDC40-204ENST00000397545 TMEM223A0PJW6 202 aa8□□□□□ -1.13
CCDC40-204ENST00000397545 MRAPQ8TCY5 172 aa7.99□□□□□ -1.13
CCDC40-204ENST00000397545 KRTAP10-9P60411 292 aa7.99□□□□□ -1.13
CCDC40-204ENST00000397545 Q8N6K4 173 aa7.99□□□□□ -1.13
CCDC40-204ENST00000397545 SVEP1Q4LDE5 3571 aa7.98□□□□□ -1.13
CCDC40-204ENST00000397545 SLPIP03973 132 aa7.98□□□□□ -1.13
CCDC40-204ENST00000397545 TRBV27A0A0K0K1C4 114 aa7.98□□□□□ -1.13
CCDC40-204ENST00000397545 CLPSL1A2RUU4 121 aa7.98□□□□□ -1.13
CCDC40-204ENST00000397545 NDUFV3P56181 108 aaKnown RBP7.98□□□□□ -1.13
CCDC40-204ENST00000397545 A0A096LNJ9 63 aa7.98□□□□□ -1.13
CCDC40-204ENST00000397545 EDN2P20800 178 aa7.98□□□□□ -1.13
CCDC40-204ENST00000397545 C1orf43Q9BWL3 253 aa7.98□□□□□ -1.13
CCDC40-204ENST00000397545 MRPS12O15235 138 aaKnown RBP7.98□□□□□ -1.13
CCDC40-204ENST00000397545 C11orf71Q6IPW1 123 aa7.98□□□□□ -1.13
CCDC40-204ENST00000397545 TMEM263Q8WUH6 116 aaKnown RBP7.98□□□□□ -1.13
CCDC40-204ENST00000397545 SPAG11BQ08648 103 aa7.97□□□□□ -1.13
CCDC40-204ENST00000397545 FSTL3O95633 263 aa7.97□□□□□ -1.13
CCDC40-204ENST00000397545 POLR2KP53803 58 aaKnown RBP7.97□□□□□ -1.13
CCDC40-204ENST00000397545 TRBV10-1A0A0K0K1A3 114 aa7.97□□□□□ -1.13
CCDC40-204ENST00000397545 LINC00308Q8TCZ7 52 aa7.97□□□□□ -1.13
CCDC40-204ENST00000397545 ATOX1O00244 68 aa7.96□□□□□ -1.13
CCDC40-204ENST00000397545 SPART-AS1P0CW21 52 aa7.96□□□□□ -1.14
CCDC40-204ENST00000397545 CDK2AP2O75956 126 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms