RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 DNAH10OSP0CZ25 163 aa16.09■□□□□ 0.17
TSPAN4-202ENST00000397396 TEX43Q6ZNM6 134 aa16.09■□□□□ 0.17
TSPAN4-202ENST00000397396 ZNF664Q8N3J9 261 aa16.09■□□□□ 0.17
TSPAN4-202ENST00000397396 VCX2Q9H322 139 aa16.09■□□□□ 0.17
TSPAN4-202ENST00000397396 CDC42SE2Q9NRR3 84 aa16.09■□□□□ 0.17
TSPAN4-202ENST00000397396 IFITM10A6NMD0 228 aa16.08■□□□□ 0.16
TSPAN4-202ENST00000397396 K7EP13 123 aa16.08■□□□□ 0.16
TSPAN4-202ENST00000397396 PRSS1P07477 247 aa16.08■□□□□ 0.16
TSPAN4-202ENST00000397396 Q6ZUT4 128 aa16.08■□□□□ 0.16
TSPAN4-202ENST00000397396 C2orf88Q9BSF0 95 aa16.08■□□□□ 0.16
TSPAN4-202ENST00000397396 Q8N976 141 aa16.07■□□□□ 0.16
TSPAN4-202ENST00000397396 BAALCQ8WXS3 180 aa16.07■□□□□ 0.16
TSPAN4-202ENST00000397396 TRAV12-1A0A0B4J245 112 aa16.06■□□□□ 0.16
TSPAN4-202ENST00000397396 ANGP03950 147 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-202ENST00000397396 PMVKQ15126 192 aa16.06■□□□□ 0.16
TSPAN4-202ENST00000397396 LINC00173Q6ZV60 143 aa16.06■□□□□ 0.16
TSPAN4-202ENST00000397396 IGLV4-60A0A075B6I1 120 aa16.05■□□□□ 0.16
TSPAN4-202ENST00000397396 TRAV9-2A0A087WT02 112 aa16.05■□□□□ 0.16
TSPAN4-202ENST00000397396 C10orf126Q8N4M7 172 aa16.05■□□□□ 0.16
TSPAN4-202ENST00000397396 AMELXQ99217 191 aa16.05■□□□□ 0.16
TSPAN4-202ENST00000397396 Q9H8V8 135 aa16.05■□□□□ 0.16
TSPAN4-202ENST00000397396 KRTDAPP60985 99 aa16.04■□□□□ 0.16
TSPAN4-202ENST00000397396 LGALS9CQ6DKI2 356 aa16.04■□□□□ 0.16
TSPAN4-202ENST00000397396 PET117Q6UWS5 81 aa16.04■□□□□ 0.16
TSPAN4-202ENST00000397396 SPATA12Q7Z6I5 190 aa16.04■□□□□ 0.16
TSPAN4-202ENST00000397396 SYS1-DBNDD2H3BUS1 97 aa16.03■□□□□ 0.16
TSPAN4-202ENST00000397396 IGHV3-30P01768 117 aa16.03■□□□□ 0.16
TSPAN4-202ENST00000397396 IGHV3-33P01772 117 aa16.03■□□□□ 0.16
TSPAN4-202ENST00000397396 IGHV3-30-3P0DP02 117 aa16.03■□□□□ 0.16
TSPAN4-202ENST00000397396 IGHV3-30-5P0DP03 117 aa16.03■□□□□ 0.16
TSPAN4-202ENST00000397396 OR10D4PQ8NGN7 298 aa16.03■□□□□ 0.16
TSPAN4-202ENST00000397396 OPRPNQ99935 248 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-202ENST00000397396 C20orf202A1L168 122 aa16.02■□□□□ 0.16
TSPAN4-202ENST00000397396 C3orf79P0CE67 100 aa16.02■□□□□ 0.16
TSPAN4-202ENST00000397396 AKR1D1P51857 326 aa16.02■□□□□ 0.16
TSPAN4-202ENST00000397396 STARD9Q9P2P6 4700 aa16.02■□□□□ 0.15
TSPAN4-202ENST00000397396 CRPP02741 224 aa16.01■□□□□ 0.15
TSPAN4-202ENST00000397396 FAM104AQ969W3 186 aa16.01■□□□□ 0.15
TSPAN4-202ENST00000397396 CST9LQ9H4G1 147 aa16.01■□□□□ 0.15
TSPAN4-202ENST00000397396 CCL25O15444 150 aa16■□□□□ 0.15
TSPAN4-202ENST00000397396 PRSS29PA6NIE9 313 aa15.99■□□□□ 0.15
TSPAN4-202ENST00000397396 H0Y8G0 127 aa15.99■□□□□ 0.15
TSPAN4-202ENST00000397396 RNASE13Q5GAN3 156 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-202ENST00000397396 TTC32Q5I0X7 151 aa15.99■□□□□ 0.15
TSPAN4-202ENST00000397396 LINC00269Q8N2A0 174 aa15.99■□□□□ 0.15
TSPAN4-202ENST00000397396 KLK12Q9UKR0 248 aa15.99■□□□□ 0.15
TSPAN4-202ENST00000397396 CSMD3Q7Z407 3707 aa15.99■□□□□ 0.15
TSPAN4-202ENST00000397396 SEC11AP67812 179 aa15.98■□□□□ 0.15
TSPAN4-202ENST00000397396 REG3AQ06141 175 aa15.98■□□□□ 0.15
TSPAN4-202ENST00000397396 Q8N3U1 123 aa15.98■□□□□ 0.15
TSPAN4-202ENST00000397396 PRR34Q9NV39 138 aa15.98■□□□□ 0.15
TSPAN4-202ENST00000397396 CHTOPQ9Y3Y2 248 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-202ENST00000397396 SS18Q15532 418 aa15.96■□□□□ 0.15
TSPAN4-202ENST00000397396 F8VRH5 84 aa15.95■□□□□ 0.14
TSPAN4-202ENST00000397396 UBE2D1P51668 147 aa15.95■□□□□ 0.14
TSPAN4-202ENST00000397396 ODF1Q14990 250 aa15.95■□□□□ 0.14
TSPAN4-202ENST00000397396 MIAQ16674 131 aa15.95■□□□□ 0.14
TSPAN4-202ENST00000397396 PLECQ15149 4684 aaKnown RBP15.95■□□□□ 0.14
TSPAN4-202ENST00000397396 TRAV13-1A0A0B4J241 112 aa15.94■□□□□ 0.14
TSPAN4-202ENST00000397396 TRAV8-4A0A0B4J246 113 aa15.94■□□□□ 0.14
TSPAN4-202ENST00000397396 LINC01545Q5VT33 79 aa15.94■□□□□ 0.14
TSPAN4-202ENST00000397396 UBE2WQ96B02 151 aa15.94■□□□□ 0.14
TSPAN4-202ENST00000397396 TRAV8-3A0A0A6YYJ7 113 aa15.94■□□□□ 0.14
TSPAN4-202ENST00000397396 IGKV3OR2-268A0A0C4DH90 116 aa15.94■□□□□ 0.14
TSPAN4-202ENST00000397396 LINC00959A0A1B0GUT2 108 aa15.94■□□□□ 0.14
TSPAN4-202ENST00000397396 IBA57-AS1B1ANH7 110 aa15.94■□□□□ 0.14
TSPAN4-202ENST00000397396 PLNP26678 52 aa15.94■□□□□ 0.14
TSPAN4-202ENST00000397396 FAM19A3Q7Z5A8 133 aa15.94■□□□□ 0.14
TSPAN4-202ENST00000397396 LINC00476Q8WZB0 136 aa15.94■□□□□ 0.14
TSPAN4-202ENST00000397396 ZC2HC1BQ5TFG8 222 aa15.93■□□□□ 0.14
TSPAN4-202ENST00000397396 CLPSL2Q6UWE3 100 aa15.93■□□□□ 0.14
TSPAN4-202ENST00000397396 MRPL35Q9NZE8 188 aaKnown RBP15.93■□□□□ 0.14
TSPAN4-202ENST00000397396 TINCRA0A1B0GVN0 87 aa15.92■□□□□ 0.14
TSPAN4-202ENST00000397396 HERVK_113P63121 156 aa15.92■□□□□ 0.14
TSPAN4-202ENST00000397396 DPM2O94777 84 aa15.91■□□□□ 0.14
TSPAN4-202ENST00000397396 IGLC3P0DOY3 106 aa15.91■□□□□ 0.14
TSPAN4-202ENST00000397396 ENHOQ6UWT2 76 aa15.91■□□□□ 0.14
TSPAN4-202ENST00000397396 RMI2Q96E14 147 aa15.91■□□□□ 0.14
TSPAN4-202ENST00000397396 GEMIN7Q9H840 131 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-202ENST00000397396 LY6G6CO95867 125 aa15.9■□□□□ 0.14
TSPAN4-202ENST00000397396 NFE4Q86UQ8 179 aa15.9■□□□□ 0.14
TSPAN4-202ENST00000397396 CHAC1Q9BUX1 264 aa15.9■□□□□ 0.14
TSPAN4-202ENST00000397396 NBDYA0A0U1RRE5 68 aa15.89■□□□□ 0.13
TSPAN4-202ENST00000397396 LOC105371267A0A1B0GV96 52 aa15.89■□□□□ 0.13
TSPAN4-202ENST00000397396 SCGB1D1O95968 90 aa15.89■□□□□ 0.13
TSPAN4-202ENST00000397396 IGKCP01834 107 aa15.89■□□□□ 0.13
TSPAN4-202ENST00000397396 JOSD1Q15040 202 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-202ENST00000397396 IGLV4-69A0A075B6H9 119 aa15.88■□□□□ 0.13
TSPAN4-202ENST00000397396 A0A0J9YXV3 536 aa15.88■□□□□ 0.13
TSPAN4-202ENST00000397396 LINC00242Q5T6M2 205 aa15.88■□□□□ 0.13
TSPAN4-202ENST00000397396 C1orf43Q9BWL3 253 aa15.88■□□□□ 0.13
TSPAN4-202ENST00000397396 CHCHD10Q8WYQ3 142 aaPredicted RBP15.87■□□□□ 0.13
TSPAN4-202ENST00000397396 PMCHL2Q9BQD1 86 aa15.86■□□□□ 0.13
TSPAN4-202ENST00000397396 COX11Q9Y6N1 276 aa15.86■□□□□ 0.13
TSPAN4-202ENST00000397396 CD164L2Q6UWJ8 174 aa15.85■□□□□ 0.13
TSPAN4-202ENST00000397396 C11orf86A6NJI1 115 aa15.84■□□□□ 0.13
TSPAN4-202ENST00000397396 H3BRM9 83 aa15.84■□□□□ 0.13
TSPAN4-202ENST00000397396 IGLV10-54A0A075B6I4 117 aa15.83■□□□□ 0.12
TSPAN4-202ENST00000397396 IGLV5-45A0A087WSX0 123 aa15.83■□□□□ 0.12
TSPAN4-202ENST00000397396 XCL1P47992 114 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms