RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 CDC42SE2Q9NRR3 84 aa9.38□□□□□ -0.91
MCF2L-209ENST00000397036 F8VRH5 84 aa9.37□□□□□ -0.91
MCF2L-209ENST00000397036 AMMECR1LQ6DCA0 310 aa9.37□□□□□ -0.91
MCF2L-209ENST00000397036 OR5A1Q8NGJ0 315 aa9.37□□□□□ -0.91
MCF2L-209ENST00000397036 TMEM101Q96IK0 257 aa9.37□□□□□ -0.91
MCF2L-209ENST00000397036 CHCHD5Q9BSY4 110 aa9.37□□□□□ -0.91
MCF2L-209ENST00000397036 C12orf57Q99622 126 aa9.36□□□□□ -0.91
MCF2L-209ENST00000397036 CEMP1Q6PRD7 247 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-209ENST00000397036 ZNF664Q8N3J9 261 aa9.36□□□□□ -0.91
MCF2L-209ENST00000397036 OPRPNQ99935 248 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-209ENST00000397036 CHTOPQ9Y3Y2 248 aaKnown RBP9.36□□□□□ -0.91
MCF2L-209ENST00000397036 FBN3Q75N90 2809 aa9.35□□□□□ -0.91
MCF2L-209ENST00000397036 TRAV8-6A0A0B4J262 113 aa9.35□□□□□ -0.91
MCF2L-209ENST00000397036 H0Y8G0 127 aa9.35□□□□□ -0.91
MCF2L-209ENST00000397036 DPM2O94777 84 aa9.35□□□□□ -0.91
MCF2L-209ENST00000397036 PLNP26678 52 aa9.35□□□□□ -0.91
MCF2L-209ENST00000397036 GAGE6Q13070 117 aa9.35□□□□□ -0.91
MCF2L-209ENST00000397036 MRPL35Q9NZE8 188 aaKnown RBP9.35□□□□□ -0.91
MCF2L-209ENST00000397036 TCTAP57738 103 aa9.34□□□□□ -0.91
MCF2L-209ENST00000397036 S100A12P80511 92 aa9.34□□□□□ -0.91
MCF2L-209ENST00000397036 ESRGQ1W209 222 aa9.34□□□□□ -0.91
MCF2L-209ENST00000397036 Q6ZUT4 128 aa9.34□□□□□ -0.91
MCF2L-209ENST00000397036 FAM19A3Q7Z5A8 133 aa9.34□□□□□ -0.91
MCF2L-209ENST00000397036 C2orf88Q9BSF0 95 aa9.34□□□□□ -0.91
MCF2L-209ENST00000397036 TRAV9-2A0A087WT02 112 aa9.33□□□□□ -0.92
MCF2L-209ENST00000397036 IGKCP01834 107 aa9.33□□□□□ -0.92
MCF2L-209ENST00000397036 RBX1P62877 108 aa9.33□□□□□ -0.92
MCF2L-209ENST00000397036 NFE4Q86UQ8 179 aa9.33□□□□□ -0.92
MCF2L-209ENST00000397036 NUPR2A6NF83 97 aa9.32□□□□□ -0.92
MCF2L-209ENST00000397036 IGLL5B9A064 214 aa9.32□□□□□ -0.92
MCF2L-209ENST00000397036 TMEM262E9PQX1 116 aa9.32□□□□□ -0.92
MCF2L-209ENST00000397036 IGLC3P0DOY3 106 aa9.32□□□□□ -0.92
MCF2L-209ENST00000397036 CDPF1Q6NVV7 123 aa9.32□□□□□ -0.92
MCF2L-209ENST00000397036 PMCHL2Q9BQD1 86 aa9.32□□□□□ -0.92
MCF2L-209ENST00000397036 IGLV4-69A0A075B6H9 119 aa9.31□□□□□ -0.92
MCF2L-209ENST00000397036 IGLV4-60A0A075B6I1 120 aa9.31□□□□□ -0.92
MCF2L-209ENST00000397036 CCL25O15444 150 aa9.31□□□□□ -0.92
MCF2L-209ENST00000397036 UBE2D1P51668 147 aa9.31□□□□□ -0.92
MCF2L-209ENST00000397036 SEC11AP67812 179 aa9.31□□□□□ -0.92
MCF2L-209ENST00000397036 ZC2HC1BQ5TFG8 222 aa9.31□□□□□ -0.92
MCF2L-209ENST00000397036 KLK5Q9Y337 293 aaPredicted RBP9.31□□□□□ -0.92
MCF2L-209ENST00000397036 TINCRA0A1B0GVN0 87 aa9.31□□□□□ -0.92
MCF2L-209ENST00000397036 MPV17L2Q567V2 206 aa9.31□□□□□ -0.92
MCF2L-209ENST00000397036 VAMP8Q9BV40 100 aa9.31□□□□□ -0.92
MCF2L-209ENST00000397036 DYNC2H1Q8NCM8 4307 aaKnown RBP9.3□□□□□ -0.92
MCF2L-209ENST00000397036 CCL18P55774 89 aa9.3□□□□□ -0.92
MCF2L-209ENST00000397036 APLNQ9ULZ1 77 aa9.3□□□□□ -0.92
MCF2L-209ENST00000397036 MRPS16Q9Y3D3 137 aaKnown RBP9.3□□□□□ -0.92
MCF2L-209ENST00000397036 HSBP1L1C9JCN9 74 aa9.29□□□□□ -0.92
MCF2L-209ENST00000397036 ATOH7Q8N100 152 aa9.29□□□□□ -0.92
MCF2L-209ENST00000397036 UPK3BQ9BT76 320 aa9.29□□□□□ -0.92
MCF2L-209ENST00000397036 IGLV5-45A0A087WSX0 123 aa9.28□□□□□ -0.92
MCF2L-209ENST00000397036 C11orf86A6NJI1 115 aa9.28□□□□□ -0.92
MCF2L-209ENST00000397036 RNASE13Q5GAN3 156 aaKnown RBP9.28□□□□□ -0.92
MCF2L-209ENST00000397036 LINC01556Q5JQF7 62 aa9.28□□□□□ -0.92
MCF2L-209ENST00000397036 A0A0J9YXV3 536 aa9.27□□□□□ -0.93
MCF2L-209ENST00000397036 LINC00242Q5T6M2 205 aa9.27□□□□□ -0.93
MCF2L-209ENST00000397036 PRR34Q9NV39 138 aa9.27□□□□□ -0.93
MCF2L-209ENST00000397036 DNAH10OSP0CZ25 163 aa9.26□□□□□ -0.93
MCF2L-209ENST00000397036 HERVK_113P63121 156 aa9.26□□□□□ -0.93
MCF2L-209ENST00000397036 CHAC1Q9BUX1 264 aa9.26□□□□□ -0.93
MCF2L-209ENST00000397036 LINC00588Q9Y4M8 146 aa9.26□□□□□ -0.93
MCF2L-209ENST00000397036 LINC00959A0A1B0GUT2 108 aa9.26□□□□□ -0.93
MCF2L-209ENST00000397036 hDV102S1A0JD36 115 aa9.26□□□□□ -0.93
MCF2L-209ENST00000397036 WFDC10BQ8IUB3 73 aa9.26□□□□□ -0.93
MCF2L-209ENST00000397036 PAM16Q9Y3D7 125 aa9.26□□□□□ -0.93
MCF2L-209ENST00000397036 DNAH7Q8WXX0 4024 aa9.25□□□□□ -0.93
MCF2L-209ENST00000397036 TRAV13-1A0A0B4J241 112 aa9.25□□□□□ -0.93
MCF2L-209ENST00000397036 K7EP13 123 aa9.25□□□□□ -0.93
MCF2L-209ENST00000397036 ANGP03950 147 aaKnown RBP9.25□□□□□ -0.93
MCF2L-209ENST00000397036 ZNF22P17026 224 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-209ENST00000397036 MAJINQ3KP22 176 aa9.25□□□□□ -0.93
MCF2L-209ENST00000397036 SPATA45Q537H7 98 aa9.25□□□□□ -0.93
MCF2L-209ENST00000397036 STPG4Q8N801 248 aa9.25□□□□□ -0.93
MCF2L-209ENST00000397036 GEMIN7Q9H840 131 aaKnown RBP9.25□□□□□ -0.93
MCF2L-209ENST00000397036 LINC00269Q8N2A0 174 aa9.24□□□□□ -0.93
MCF2L-209ENST00000397036 E9PLD3 99 aa9.23□□□□□ -0.93
MCF2L-209ENST00000397036 HERVK_113P61574 105 aa9.23□□□□□ -0.93
MCF2L-209ENST00000397036 REG3AQ06141 175 aa9.23□□□□□ -0.93
MCF2L-209ENST00000397036 SS18Q15532 418 aa9.23□□□□□ -0.93
MCF2L-209ENST00000397036 ANKRD39Q53RE8 183 aa9.23□□□□□ -0.93
MCF2L-209ENST00000397036 TMEM170BQ5T4T1 132 aa9.23□□□□□ -0.93
MCF2L-209ENST00000397036 TRAV8-4A0A0B4J246 113 aa9.22□□□□□ -0.93
MCF2L-209ENST00000397036 IGHV3OR16-9A0A0B4J2B5 98 aa9.22□□□□□ -0.93
MCF2L-209ENST00000397036 TMEM223A0PJW6 202 aa9.22□□□□□ -0.93
MCF2L-209ENST00000397036 H3BRM9 83 aa9.22□□□□□ -0.93
MCF2L-209ENST00000397036 SIVA1O15304 175 aa9.22□□□□□ -0.93
MCF2L-209ENST00000397036 LINC01561Q8N1V8 128 aa9.22□□□□□ -0.93
MCF2L-209ENST00000397036 Q8N3U1 123 aa9.22□□□□□ -0.93
MCF2L-209ENST00000397036 MUC7Q8TAX7 377 aa9.22□□□□□ -0.93
MCF2L-209ENST00000397036 WWC2-AS2Q96NR7 200 aa9.22□□□□□ -0.93
MCF2L-209ENST00000397036 COX6A2Q02221 97 aa9.21□□□□□ -0.93
MCF2L-209ENST00000397036 KLK12Q9UKR0 248 aa9.21□□□□□ -0.93
MCF2L-209ENST00000397036 TSTD3H0UI37 97 aa9.21□□□□□ -0.94
MCF2L-209ENST00000397036 DLEU1O43261 78 aa9.21□□□□□ -0.94
MCF2L-209ENST00000397036 MIAQ16674 131 aa9.21□□□□□ -0.94
MCF2L-209ENST00000397036 ENHOQ6UWT2 76 aa9.21□□□□□ -0.94
MCF2L-209ENST00000397036 LINC00469Q8N7U9 141 aa9.21□□□□□ -0.94
MCF2L-209ENST00000397036 CDKN2A-AS1Q9UH64 79 aa9.21□□□□□ -0.94
MCF2L-209ENST00000397036 IGHV3-30P01768 117 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms