RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 DNAH9Q9NYC9 4486 aa10.55□□□□□ -0.72
TM9SF1-202ENST00000396854 SCGB1D4Q6XE38 83 aa10.55□□□□□ -0.72
TM9SF1-202ENST00000396854 HUWE1Q7Z6Z7 4374 aaKnown RBP10.55□□□□□ -0.72
TM9SF1-202ENST00000396854 TEX48A0A1B0GUV7 120 aa10.54□□□□□ -0.72
TM9SF1-202ENST00000396854 ZNF56Q15929 161 aa10.54□□□□□ -0.72
TM9SF1-202ENST00000396854 PRKDCP78527 4128 aaKnown RBP10.54□□□□□ -0.72
TM9SF1-202ENST00000396854 LYRM9A8MSI8 78 aa10.54□□□□□ -0.72
TM9SF1-202ENST00000396854 UBE2D1P51668 147 aa10.54□□□□□ -0.72
TM9SF1-202ENST00000396854 EMP1P54849 157 aa10.54□□□□□ -0.72
TM9SF1-202ENST00000396854 LINC00612Q8N6U2 182 aa10.54□□□□□ -0.72
TM9SF1-202ENST00000396854 MRPL16Q9NX20 251 aaKnown RBP10.54□□□□□ -0.72
TM9SF1-202ENST00000396854 TENM3Q9P273 2699 aa10.54□□□□□ -0.72
TM9SF1-202ENST00000396854 DEFB4AO15263 64 aa10.53□□□□□ -0.72
TM9SF1-202ENST00000396854 RPL24P83731 157 aaKnown RBP10.53□□□□□ -0.72
TM9SF1-202ENST00000396854 TRGV1A0A0A0MS02 117 aa10.53□□□□□ -0.72
TM9SF1-202ENST00000396854 A0A0J9YY99 117 aa10.53□□□□□ -0.72
TM9SF1-202ENST00000396854 H3BMG7 143 aa10.53□□□□□ -0.72
TM9SF1-202ENST00000396854 NHLRC4P0CG21 123 aaPredicted RBP10.53□□□□□ -0.72
TM9SF1-202ENST00000396854 Q6ZTI0 123 aa10.53□□□□□ -0.72
TM9SF1-202ENST00000396854 NFE4Q86UQ8 179 aa10.53□□□□□ -0.72
TM9SF1-202ENST00000396854 ZNRF2Q8NHG8 242 aa10.53□□□□□ -0.72
TM9SF1-202ENST00000396854 DEFB104AQ8WTQ1 72 aa10.53□□□□□ -0.72
TM9SF1-202ENST00000396854 A8MWV9 139 aa10.52□□□□□ -0.73
TM9SF1-202ENST00000396854 SRSF9Q13242 221 aaKnown RBP eCLIP10.52□□□□□ -0.73
TM9SF1-202ENST00000396854 FAM222AQ5U5X8 452 aa10.52□□□□□ -0.73
TM9SF1-202ENST00000396854 EDA2RQ9HAV5 297 aa10.52□□□□□ -0.73
TM9SF1-202ENST00000396854 SPANXB1Q9NS25 103 aaPredicted RBP10.52□□□□□ -0.73
TM9SF1-202ENST00000396854 WFDC2Q14508 124 aa10.51□□□□□ -0.73
TM9SF1-202ENST00000396854 PGPEP1Q9NXJ5 209 aa10.51□□□□□ -0.73
TM9SF1-202ENST00000396854 PRO0461Q9UI25 63 aa10.51□□□□□ -0.73
TM9SF1-202ENST00000396854 TSPEAR-AS2P59090 65 aa10.51□□□□□ -0.73
TM9SF1-202ENST00000396854 TMEM170BQ5T4T1 132 aa10.51□□□□□ -0.73
TM9SF1-202ENST00000396854 COL7A1Q02388 2944 aa10.5□□□□□ -0.73
TM9SF1-202ENST00000396854 I3L3M4 83 aa10.5□□□□□ -0.73
TM9SF1-202ENST00000396854 SPART-AS1P0CW21 52 aa10.5□□□□□ -0.73
TM9SF1-202ENST00000396854 GAGE13Q4V321 117 aa10.5□□□□□ -0.73
TM9SF1-202ENST00000396854 CELA1Q9UNI1 258 aa10.5□□□□□ -0.73
TM9SF1-202ENST00000396854 A0A0J9YWU9 116 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 RS1O15537 224 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 GAGE7O76087 117 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 GAGE12FP0CL80 117 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 GAGE12GP0CL81 117 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 GAGE12IP0CL82 117 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 P0DMU3 169 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 FAM231AP0DMU4 169 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 FAM231CP0DMU5 169 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 C20orf203Q8NBC4 194 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 AMELXQ99217 191 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 RHODO00212 210 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 SLC25A29Q8N8R3 303 aa10.49□□□□□ -0.73
TM9SF1-202ENST00000396854 TRAV4A0A0B4J268 109 aa10.48□□□□□ -0.73
TM9SF1-202ENST00000396854 J3QQQ9 107 aa10.48□□□□□ -0.73
TM9SF1-202ENST00000396854 TSPAN13O95857 204 aa10.48□□□□□ -0.73
TM9SF1-202ENST00000396854 IGHV3-30P01768 117 aa10.48□□□□□ -0.73
TM9SF1-202ENST00000396854 IGHV3-30-5P0DP03 117 aa10.48□□□□□ -0.73
TM9SF1-202ENST00000396854 TRGV2A0A075B6R0 118 aa10.47□□□□□ -0.73
TM9SF1-202ENST00000396854 TMEM223A0PJW6 202 aa10.47□□□□□ -0.73
TM9SF1-202ENST00000396854 DEFB130BP0DP73 79 aa10.47□□□□□ -0.73
TM9SF1-202ENST00000396854 DEFB130AP0DP74 79 aa10.47□□□□□ -0.73
TM9SF1-202ENST00000396854 J3QR89 54 aa10.46□□□□□ -0.73
TM9SF1-202ENST00000396854 LEPROTO15243 131 aa10.46□□□□□ -0.73
TM9SF1-202ENST00000396854 LGALS3P17931 250 aaKnown RBP10.46□□□□□ -0.73
TM9SF1-202ENST00000396854 UBE2D3P61077 147 aa10.46□□□□□ -0.73
TM9SF1-202ENST00000396854 UBE2D2P62837 147 aa10.46□□□□□ -0.73
TM9SF1-202ENST00000396854 OPRPNQ99935 248 aaPredicted RBP10.46□□□□□ -0.73
TM9SF1-202ENST00000396854 IGLV4-3A0A075B6K6 122 aa10.46□□□□□ -0.74
TM9SF1-202ENST00000396854 CIDEAO60543 219 aa10.46□□□□□ -0.74
TM9SF1-202ENST00000396854 DAD1P61803 113 aa10.46□□□□□ -0.74
TM9SF1-202ENST00000396854 ETDBQ3ZM63 59 aa10.45□□□□□ -0.74
TM9SF1-202ENST00000396854 LYRM7Q5U5X0 104 aa10.45□□□□□ -0.74
TM9SF1-202ENST00000396854 ZNF22P17026 224 aaPredicted RBP10.45□□□□□ -0.74
TM9SF1-202ENST00000396854 SH2D6Q7Z4S9 175 aa10.45□□□□□ -0.74
TM9SF1-202ENST00000396854 PYGO1Q9Y3Y4 419 aa10.45□□□□□ -0.74
TM9SF1-202ENST00000396854 APOMO95445 188 aa10.44□□□□□ -0.74
TM9SF1-202ENST00000396854 CFC1BP0CG36 223 aa10.43□□□□□ -0.74
TM9SF1-202ENST00000396854 CFC1P0CG37 223 aa10.43□□□□□ -0.74
TM9SF1-202ENST00000396854 C11orf45Q8TAV5 145 aa10.43□□□□□ -0.74
TM9SF1-202ENST00000396854 FBN3Q75N90 2809 aa10.43□□□□□ -0.74
TM9SF1-202ENST00000396854 IGHV3-53P01767 116 aa10.43□□□□□ -0.74
TM9SF1-202ENST00000396854 CRYBA4P53673 196 aa10.43□□□□□ -0.74
TM9SF1-202ENST00000396854 MTURNQ8N3F0 131 aa10.43□□□□□ -0.74
TM9SF1-202ENST00000396854 VCX2Q9H322 139 aa10.43□□□□□ -0.74
TM9SF1-202ENST00000396854 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
TM9SF1-202ENST00000396854 ATP6V0E2Q8NHE4 81 aa10.42□□□□□ -0.74
TM9SF1-202ENST00000396854 LOC107984156A0A0G2JMH3 177 aa10.42□□□□□ -0.74
TM9SF1-202ENST00000396854 A0A0J9YXV3 536 aa10.42□□□□□ -0.74
TM9SF1-202ENST00000396854 ATP5G1P05496 136 aa10.42□□□□□ -0.74
TM9SF1-202ENST00000396854 FHL2Q14192 279 aa10.42□□□□□ -0.74
TM9SF1-202ENST00000396854 ARL17AQ8IVW1 177 aa10.42□□□□□ -0.74
TM9SF1-202ENST00000396854 C10orf126Q8N4M7 172 aa10.42□□□□□ -0.74
TM9SF1-202ENST00000396854 SMCPP49901 116 aaPredicted RBP10.41□□□□□ -0.74
TM9SF1-202ENST00000396854 FAM104AQ969W3 186 aa10.41□□□□□ -0.74
TM9SF1-202ENST00000396854 PSMB2P49721 201 aa10.4□□□□□ -0.74
TM9SF1-202ENST00000396854 NANOS2P60321 138 aaKnown RBP10.4□□□□□ -0.74
TM9SF1-202ENST00000396854 Q6ZSN1 163 aa10.4□□□□□ -0.74
TM9SF1-202ENST00000396854 DNAJC30Q96LL9 226 aa10.4□□□□□ -0.74
TM9SF1-202ENST00000396854 PRO1854Q9UHT4 67 aa10.4□□□□□ -0.74
TM9SF1-202ENST00000396854 TRBV20-1A0A075B6N2 111 aa10.4□□□□□ -0.75
TM9SF1-202ENST00000396854 GAGE12HA6NDE8 117 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms