RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 LINC00315P59091 139 aa6.28□□□□□ -1.4
CCR9-203ENST00000395963 Q6ZTI0 123 aa6.28□□□□□ -1.4
CCR9-203ENST00000395963 LINC01600Q96MT4 127 aa6.28□□□□□ -1.4
CCR9-203ENST00000395963 ODF1Q14990 250 aa6.28□□□□□ -1.4
CCR9-203ENST00000395963 RNF185Q96GF1 192 aa6.28□□□□□ -1.4
CCR9-203ENST00000395963 PRB2P02812 416 aaPredicted RBP6.27□□□□□ -1.41
CCR9-203ENST00000395963 PLNP26678 52 aa6.27□□□□□ -1.41
CCR9-203ENST00000395963 FCER1GP30273 86 aa6.27□□□□□ -1.41
CCR9-203ENST00000395963 IFI27P40305 119 aaPredicted RBP6.27□□□□□ -1.41
CCR9-203ENST00000395963 RHOHQ15669 191 aa6.27□□□□□ -1.41
CCR9-203ENST00000395963 C14orf178Q8N769 122 aaPredicted RBP6.27□□□□□ -1.41
CCR9-203ENST00000395963 MSRB1Q9NZV6 116 aa6.27□□□□□ -1.41
CCR9-203ENST00000395963 HHLA3Q9XRX5 114 aa6.27□□□□□ -1.41
CCR9-203ENST00000395963 IGKV2D-26A0A0A0MRZ7 120 aa6.27□□□□□ -1.41
CCR9-203ENST00000395963 GATA1P15976 413 aaPredicted RBP6.27□□□□□ -1.41
CCR9-203ENST00000395963 GAGE2BQ13066 116 aa6.27□□□□□ -1.41
CCR9-203ENST00000395963 MRPL51Q4U2R6 128 aaKnown RBP6.27□□□□□ -1.41
CCR9-203ENST00000395963 GAGE2EQ4V326 116 aa6.27□□□□□ -1.41
CCR9-203ENST00000395963 AMN1Q8IY45 258 aa6.27□□□□□ -1.41
CCR9-203ENST00000395963 GAGE2DQ9UEU5 116 aa6.27□□□□□ -1.41
CCR9-203ENST00000395963 NOTCH3Q9UM47 2321 aa6.27□□□□□ -1.41
CCR9-203ENST00000395963 LINC01549A6NIU2 74 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 CKS2P33552 79 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 NDUFV3P56181 108 aaKnown RBP6.26□□□□□ -1.41
CCR9-203ENST00000395963 ZNF56Q15929 161 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 NFE4Q86UQ8 179 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 PRADC1Q9BSG0 188 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 PRO0255Q9UI72 69 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 TRBV7-3A0A075B6L6 115 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 K7EQD1 137 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 SNCGO76070 127 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 IFITM1P13164 125 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 UBE2D3P61077 147 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 UBE2D2P62837 147 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 C11orf45Q8TAV5 145 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 RETNQ9HD89 108 aa6.26□□□□□ -1.41
CCR9-203ENST00000395963 PRSS29PA6NIE9 313 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 M0QY20 66 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 MGPP08493 103 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 TTC32Q5I0X7 151 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 SUMO4Q6EEV6 95 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 HIST1H4GQ99525 98 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 MUC4Q99102 2169 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 DNHD1Q96M86 4753 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 PKD1L1Q8TDX9 2849 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 TRAV10A0A0B4J240 114 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 TRGV4A0A0C4DH28 118 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 A0A0J9YWU9 116 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 D6R8Y8 96 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 PRM2P04554 102 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 SMCPP49901 116 aaPredicted RBP6.25□□□□□ -1.41
CCR9-203ENST00000395963 EMP1P54849 157 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 FHL2Q14192 279 aa6.25□□□□□ -1.41
CCR9-203ENST00000395963 TRAV12-1A0A0B4J245 112 aa6.24□□□□□ -1.41
CCR9-203ENST00000395963 MYMXA0A1B0GTQ4 84 aa6.24□□□□□ -1.41
CCR9-203ENST00000395963 F5H697 171 aa6.24□□□□□ -1.41
CCR9-203ENST00000395963 RPL36AP83881 106 aaKnown RBP6.24□□□□□ -1.41
CCR9-203ENST00000395963 FAM74A4Q5TZK3 123 aa6.24□□□□□ -1.41
CCR9-203ENST00000395963 RPL36ALQ969Q0 106 aaKnown RBP6.24□□□□□ -1.41
CCR9-203ENST00000395963 A0A087WWL8 130 aa6.24□□□□□ -1.41
CCR9-203ENST00000395963 A0A087WX48 190 aa6.24□□□□□ -1.41
CCR9-203ENST00000395963 LOC389332A0A1B0GUA5 103 aa6.24□□□□□ -1.41
CCR9-203ENST00000395963 DEFB130BP0DP73 79 aa6.24□□□□□ -1.41
CCR9-203ENST00000395963 DEFB130AP0DP74 79 aa6.24□□□□□ -1.41
CCR9-203ENST00000395963 C5orf47Q569G3 176 aa6.24□□□□□ -1.41
CCR9-203ENST00000395963 NRACQ8N912 160 aa6.24□□□□□ -1.41
CCR9-203ENST00000395963 CELA1Q9UNI1 258 aa6.24□□□□□ -1.41
CCR9-203ENST00000395963 TNFRSF6BO95407 300 aa6.23□□□□□ -1.41
CCR9-203ENST00000395963 UBE2D1P51668 147 aa6.23□□□□□ -1.41
CCR9-203ENST00000395963 DAZ4Q86SG3 579 aaKnown RBP6.23□□□□□ -1.41
CCR9-203ENST00000395963 DAZ3Q9NR90 486 aaKnown RBP6.23□□□□□ -1.41
CCR9-203ENST00000395963 TRBV27A0A0K0K1C4 114 aa6.23□□□□□ -1.41
CCR9-203ENST00000395963 CCDC179H3BU77 68 aa6.23□□□□□ -1.41
CCR9-203ENST00000395963 NPYP01303 97 aa6.23□□□□□ -1.41
CCR9-203ENST00000395963 SCGB1C2P0DMR2 95 aa6.23□□□□□ -1.41
CCR9-203ENST00000395963 LINC00694P0DN24 101 aa6.23□□□□□ -1.41
CCR9-203ENST00000395963 TIRAPP58753 221 aa6.23□□□□□ -1.41
CCR9-203ENST00000395963 SUMO2P61956 95 aaKnown RBP6.23□□□□□ -1.41
CCR9-203ENST00000395963 ZC2HC1BQ5TFG8 222 aa6.23□□□□□ -1.41
CCR9-203ENST00000395963 C15orf53Q8NAA6 179 aa6.23□□□□□ -1.41
CCR9-203ENST00000395963 JPT2Q9H910 190 aa6.23□□□□□ -1.41
CCR9-203ENST00000395963 VCYO14598 125 aa6.22□□□□□ -1.41
CCR9-203ENST00000395963 MGAM2Q2M2H8 2515 aa6.22□□□□□ -1.41
CCR9-203ENST00000395963 PRSS1P07477 247 aa6.22□□□□□ -1.41
CCR9-203ENST00000395963 POLR2KP53803 58 aaKnown RBP6.22□□□□□ -1.41
CCR9-203ENST00000395963 Q8N8P6 123 aa6.22□□□□□ -1.41
CCR9-203ENST00000395963 SLC25A29Q8N8R3 303 aa6.22□□□□□ -1.41
CCR9-203ENST00000395963 SMIM2Q9BVW6 85 aa6.22□□□□□ -1.41
CCR9-203ENST00000395963 NEXN-AS1Q8NBZ9 246 aa6.21□□□□□ -1.42
CCR9-203ENST00000395963 CARD19Q96LW7 228 aa6.21□□□□□ -1.42
CCR9-203ENST00000395963 KIR2DL4Q99706 377 aa6.21□□□□□ -1.42
CCR9-203ENST00000395963 FAM240AA0A1B0GVK7 77 aa6.21□□□□□ -1.42
CCR9-203ENST00000395963 PAX4O43316 350 aa6.21□□□□□ -1.42
CCR9-203ENST00000395963 ORMDL2Q53FV1 153 aa6.21□□□□□ -1.42
CCR9-203ENST00000395963 I3L3M4 83 aa6.2□□□□□ -1.42
CCR9-203ENST00000395963 DEFB4AO15263 64 aa6.2□□□□□ -1.42
CCR9-203ENST00000395963 RPL13AP40429 203 aaKnown RBP6.2□□□□□ -1.42
CCR9-203ENST00000395963 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
CCR9-203ENST00000395963 ICOSQ9Y6W8 199 aa6.2□□□□□ -1.42
CCR9-203ENST00000395963 DEFB131BA0A096LNP1 70 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms