RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 OR5A1Q8NGJ0 315 aa10.34□□□□□ -0.75
PTPN20-206ENST00000395722 CDC42SE2Q9NRR3 84 aa10.34□□□□□ -0.75
PTPN20-206ENST00000395722 MRPS16Q9Y3D3 137 aaKnown RBP10.34□□□□□ -0.75
PTPN20-206ENST00000395722 RBX1P62877 108 aa10.33□□□□□ -0.76
PTPN20-206ENST00000395722 ODF1Q14990 250 aa10.33□□□□□ -0.76
PTPN20-206ENST00000395722 PMVKQ15126 192 aa10.33□□□□□ -0.76
PTPN20-206ENST00000395722 MPV17L2Q567V2 206 aa10.33□□□□□ -0.76
PTPN20-206ENST00000395722 DGAT2L7PQ6IED9 249 aa10.33□□□□□ -0.76
PTPN20-206ENST00000395722 WWC2-AS2Q96NR7 200 aa10.33□□□□□ -0.76
PTPN20-206ENST00000395722 LINC00588Q9Y4M8 146 aa10.33□□□□□ -0.76
PTPN20-206ENST00000395722 IGLV4-60A0A075B6I1 120 aa10.32□□□□□ -0.76
PTPN20-206ENST00000395722 PRSS29PA6NIE9 313 aa10.32□□□□□ -0.76
PTPN20-206ENST00000395722 PYY3Q5JQD4 70 aa10.32□□□□□ -0.76
PTPN20-206ENST00000395722 LGALS9CQ6DKI2 356 aa10.32□□□□□ -0.76
PTPN20-206ENST00000395722 ZNF664Q8N3J9 261 aa10.32□□□□□ -0.76
PTPN20-206ENST00000395722 MUC7Q8TAX7 377 aa10.32□□□□□ -0.76
PTPN20-206ENST00000395722 TMEM101Q96IK0 257 aa10.32□□□□□ -0.76
PTPN20-206ENST00000395722 CST9LQ9H4G1 147 aa10.32□□□□□ -0.76
PTPN20-206ENST00000395722 A0A087WX48 190 aa10.32□□□□□ -0.76
PTPN20-206ENST00000395722 ZC2HC1BQ5TFG8 222 aa10.32□□□□□ -0.76
PTPN20-206ENST00000395722 WFDC10BQ8IUB3 73 aa10.32□□□□□ -0.76
PTPN20-206ENST00000395722 VCX2Q9H322 139 aa10.32□□□□□ -0.76
PTPN20-206ENST00000395722 TMEM262E9PQX1 116 aa10.31□□□□□ -0.76
PTPN20-206ENST00000395722 CCL18P55774 89 aa10.31□□□□□ -0.76
PTPN20-206ENST00000395722 UPK3BQ9BT76 320 aa10.31□□□□□ -0.76
PTPN20-206ENST00000395722 H0Y8G0 127 aa10.3□□□□□ -0.76
PTPN20-206ENST00000395722 Q8N3U1 123 aa10.3□□□□□ -0.76
PTPN20-206ENST00000395722 CSMD3Q7Z407 3707 aa10.3□□□□□ -0.76
PTPN20-206ENST00000395722 RNASE13Q5GAN3 156 aaKnown RBP10.3□□□□□ -0.76
PTPN20-206ENST00000395722 TEX43Q6ZNM6 134 aa10.3□□□□□ -0.76
PTPN20-206ENST00000395722 C20orf202A1L168 122 aa10.29□□□□□ -0.76
PTPN20-206ENST00000395722 ZFAND6Q6FIF0 208 aa10.29□□□□□ -0.76
PTPN20-206ENST00000395722 SCGB1D1O95968 90 aa10.28□□□□□ -0.76
PTPN20-206ENST00000395722 MRPL35Q9NZE8 188 aaKnown RBP10.28□□□□□ -0.76
PTPN20-206ENST00000395722 CHTOPQ9Y3Y2 248 aaKnown RBP10.28□□□□□ -0.76
PTPN20-206ENST00000395722 IGLV4-69A0A075B6H9 119 aa10.28□□□□□ -0.76
PTPN20-206ENST00000395722 F8VRH5 84 aa10.28□□□□□ -0.76
PTPN20-206ENST00000395722 DNAH10OSP0CZ25 163 aa10.28□□□□□ -0.76
PTPN20-206ENST00000395722 LINC01556Q5JQF7 62 aa10.28□□□□□ -0.76
PTPN20-206ENST00000395722 PMCHL2Q9BQD1 86 aa10.28□□□□□ -0.76
PTPN20-206ENST00000395722 SMIM6P0DI80 62 aa10.27□□□□□ -0.77
PTPN20-206ENST00000395722 UBE2D1P51668 147 aa10.27□□□□□ -0.77
PTPN20-206ENST00000395722 FAM19A3Q7Z5A8 133 aa10.27□□□□□ -0.77
PTPN20-206ENST00000395722 C2orf88Q9BSF0 95 aa10.27□□□□□ -0.77
PTPN20-206ENST00000395722 DPM2O94777 84 aa10.25□□□□□ -0.77
PTPN20-206ENST00000395722 IGLC3P0DOY3 106 aa10.25□□□□□ -0.77
PTPN20-206ENST00000395722 NFE4Q86UQ8 179 aa10.25□□□□□ -0.77
PTPN20-206ENST00000395722 PRR34Q9NV39 138 aa10.25□□□□□ -0.77
PTPN20-206ENST00000395722 SIVA1O15304 175 aa10.25□□□□□ -0.77
PTPN20-206ENST00000395722 STARD9Q9P2P6 4700 aa10.24□□□□□ -0.77
PTPN20-206ENST00000395722 A0A0J9YXV3 536 aa10.24□□□□□ -0.77
PTPN20-206ENST00000395722 IGHV3-30P01768 117 aa10.24□□□□□ -0.77
PTPN20-206ENST00000395722 IGHV3-33P01772 117 aa10.24□□□□□ -0.77
PTPN20-206ENST00000395722 ANGP03950 147 aaKnown RBP10.24□□□□□ -0.77
PTPN20-206ENST00000395722 IGHV3-30-3P0DP02 117 aa10.24□□□□□ -0.77
PTPN20-206ENST00000395722 IGHV3-30-5P0DP03 117 aa10.24□□□□□ -0.77
PTPN20-206ENST00000395722 PLNP26678 52 aa10.24□□□□□ -0.77
PTPN20-206ENST00000395722 CDPF1Q6NVV7 123 aa10.24□□□□□ -0.77
PTPN20-206ENST00000395722 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
PTPN20-206ENST00000395722 C11orf86A6NJI1 115 aa10.23□□□□□ -0.77
PTPN20-206ENST00000395722 IGKCP01834 107 aa10.23□□□□□ -0.77
PTPN20-206ENST00000395722 TINCRA0A1B0GVN0 87 aa10.23□□□□□ -0.77
PTPN20-206ENST00000395722 LINC00242Q5T6M2 205 aa10.23□□□□□ -0.77
PTPN20-206ENST00000395722 KLK12Q9UKR0 248 aa10.23□□□□□ -0.77
PTPN20-206ENST00000395722 TRAV13-1A0A0B4J241 112 aa10.22□□□□□ -0.77
PTPN20-206ENST00000395722 LINC00959A0A1B0GUT2 108 aa10.22□□□□□ -0.77
PTPN20-206ENST00000395722 C3orf84H3BNL1 204 aa10.22□□□□□ -0.77
PTPN20-206ENST00000395722 REG3AQ06141 175 aa10.22□□□□□ -0.77
PTPN20-206ENST00000395722 ATOH7Q8N100 152 aa10.22□□□□□ -0.77
PTPN20-206ENST00000395722 PLECQ15149 4684 aaKnown RBP10.22□□□□□ -0.77
PTPN20-206ENST00000395722 CCL25O15444 150 aa10.21□□□□□ -0.77
PTPN20-206ENST00000395722 ENHOQ6UWT2 76 aa10.21□□□□□ -0.77
PTPN20-206ENST00000395722 CHAC1Q9BUX1 264 aa10.21□□□□□ -0.77
PTPN20-206ENST00000395722 Q9H8V8 135 aa10.21□□□□□ -0.77
PTPN20-206ENST00000395722 TENM2Q9NT68 2774 aa10.21□□□□□ -0.77
PTPN20-206ENST00000395722 IGLV5-45A0A087WSX0 123 aa10.21□□□□□ -0.78
PTPN20-206ENST00000395722 SEC11AP67812 179 aa10.21□□□□□ -0.78
PTPN20-206ENST00000395722 CASC10Q5T4H9 136 aa10.21□□□□□ -0.78
PTPN20-206ENST00000395722 UBE2DNLQ8IWF7 75 aa10.21□□□□□ -0.78
PTPN20-206ENST00000395722 CLPSL2Q6UWE3 100 aa10.2□□□□□ -0.78
PTPN20-206ENST00000395722 LINC00518Q8N0U6 118 aa10.2□□□□□ -0.78
PTPN20-206ENST00000395722 ZNF22P17026 224 aaPredicted RBP10.19□□□□□ -0.78
PTPN20-206ENST00000395722 COX6A2Q02221 97 aa10.19□□□□□ -0.78
PTPN20-206ENST00000395722 TRAV9-2A0A087WT02 112 aa10.19□□□□□ -0.78
PTPN20-206ENST00000395722 IGKV3OR2-268A0A0C4DH90 116 aa10.19□□□□□ -0.78
PTPN20-206ENST00000395722 K7EP13 123 aa10.19□□□□□ -0.78
PTPN20-206ENST00000395722 HERVK_113P63121 156 aa10.19□□□□□ -0.78
PTPN20-206ENST00000395722 SS18Q15532 418 aa10.18□□□□□ -0.78
PTPN20-206ENST00000395722 C12orf57Q99622 126 aa10.18□□□□□ -0.78
PTPN20-206ENST00000395722 IBA57-AS1B1ANH7 110 aa10.17□□□□□ -0.78
PTPN20-206ENST00000395722 MIAQ16674 131 aa10.17□□□□□ -0.78
PTPN20-206ENST00000395722 MAJINQ3KP22 176 aa10.17□□□□□ -0.78
PTPN20-206ENST00000395722 UBE2WQ96B02 151 aa10.17□□□□□ -0.78
PTPN20-206ENST00000395722 GEMIN7Q9H840 131 aaKnown RBP10.17□□□□□ -0.78
PTPN20-206ENST00000395722 IGHV3OR16-9A0A0B4J2B5 98 aa10.17□□□□□ -0.78
PTPN20-206ENST00000395722 hDV102S1A0JD36 115 aa10.17□□□□□ -0.78
PTPN20-206ENST00000395722 CRPP02741 224 aa10.17□□□□□ -0.78
PTPN20-206ENST00000395722 C10orf126Q8N4M7 172 aa10.17□□□□□ -0.78
PTPN20-206ENST00000395722 TRAV8-4A0A0B4J246 113 aa10.16□□□□□ -0.78
PTPN20-206ENST00000395722 STPG4Q8N801 248 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms