RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 APOMO95445 188 aa11.13□□□□□ -0.63
RAPGEF3-203ENST00000395360 IGLV1-51P01701 117 aa11.13□□□□□ -0.63
RAPGEF3-203ENST00000395360 Q6ZTI0 123 aa11.13□□□□□ -0.63
RAPGEF3-203ENST00000395360 H3BMG7 143 aa11.12□□□□□ -0.63
RAPGEF3-203ENST00000395360 FBN1P35555 2871 aaKnown RBP11.12□□□□□ -0.63
RAPGEF3-203ENST00000395360 ADARB2-AS1A8MUL3 147 aa11.12□□□□□ -0.63
RAPGEF3-203ENST00000395360 GIG44P09565 113 aaPredicted RBP11.12□□□□□ -0.63
RAPGEF3-203ENST00000395360 CKS1BP61024 79 aa11.12□□□□□ -0.63
RAPGEF3-203ENST00000395360 COL6A5A8TX70 2615 aa11.12□□□□□ -0.63
RAPGEF3-203ENST00000395360 CMC4P56277 68 aaPredicted RBP11.11□□□□□ -0.63
RAPGEF3-203ENST00000395360 Q6ZUT4 128 aa11.11□□□□□ -0.63
RAPGEF3-203ENST00000395360 C3orf56Q8N813 242 aa11.11□□□□□ -0.63
RAPGEF3-203ENST00000395360 TRAV26-1A0A087WT03 109 aa11.1□□□□□ -0.63
RAPGEF3-203ENST00000395360 IGHV3-30-3P0DP02 117 aa11.1□□□□□ -0.63
RAPGEF3-203ENST00000395360 RPL35AP18077 110 aaKnown RBP11.1□□□□□ -0.63
RAPGEF3-203ENST00000395360 TIMM21Q9BVV7 248 aa11.1□□□□□ -0.63
RAPGEF3-203ENST00000395360 NOP10Q9NPE3 64 aaKnown RBP11.1□□□□□ -0.63
RAPGEF3-203ENST00000395360 TRAV8-3A0A0A6YYJ7 113 aa11.1□□□□□ -0.63
RAPGEF3-203ENST00000395360 KRTAP21-3Q3LHN1 58 aa11.09□□□□□ -0.63
RAPGEF3-203ENST00000395360 SHISA2Q6UWI4 295 aa11.09□□□□□ -0.63
RAPGEF3-203ENST00000395360 C10orf126Q8N4M7 172 aa11.09□□□□□ -0.63
RAPGEF3-203ENST00000395360 C19orf73Q9NVV2 129 aa11.09□□□□□ -0.63
RAPGEF3-203ENST00000395360 TINCRA0A1B0GVN0 87 aa11.09□□□□□ -0.63
RAPGEF3-203ENST00000395360 SFTA2Q6UW10 78 aa11.09□□□□□ -0.63
RAPGEF3-203ENST00000395360 TENM1Q9UKZ4 2725 aa11.08□□□□□ -0.63
RAPGEF3-203ENST00000395360 TSPAN13O95857 204 aa11.08□□□□□ -0.64
RAPGEF3-203ENST00000395360 TRAV4A0A0B4J268 109 aa11.08□□□□□ -0.64
RAPGEF3-203ENST00000395360 K7EQD1 137 aa11.08□□□□□ -0.64
RAPGEF3-203ENST00000395360 CFC1BP0CG36 223 aa11.08□□□□□ -0.64
RAPGEF3-203ENST00000395360 CFC1P0CG37 223 aa11.08□□□□□ -0.64
RAPGEF3-203ENST00000395360 FAM110AQ9BQ89 295 aa11.08□□□□□ -0.64
RAPGEF3-203ENST00000395360 IGHV1-58A0A0C4DH39 117 aa11.07□□□□□ -0.64
RAPGEF3-203ENST00000395360 F8W1H4 67 aa11.07□□□□□ -0.64
RAPGEF3-203ENST00000395360 RPL24P83731 157 aaKnown RBP11.07□□□□□ -0.64
RAPGEF3-203ENST00000395360 RPL36AP83881 106 aaKnown RBP11.07□□□□□ -0.64
RAPGEF3-203ENST00000395360 DGAT2L7PQ6IED9 249 aa11.07□□□□□ -0.64
RAPGEF3-203ENST00000395360 RPL36ALQ969Q0 106 aaKnown RBP11.07□□□□□ -0.64
RAPGEF3-203ENST00000395360 DAZ2Q13117 558 aaKnown RBP11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 MTURNQ8N3F0 131 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 MDFIQ99750 246 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 LOC107984156A0A0G2JMH3 177 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 A0A0J9YXY3 114 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 TRBV10-1A0A0K0K1A3 114 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 TEX48A0A1B0GUV7 120 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 PLAC8L1A1L4L8 177 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 GAGE12HA6NDE8 117 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 A8MZ25 164 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 SPINK8P0C7L1 97 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 WFDC2Q14508 124 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 ARL17AQ8IVW1 177 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 C16orf74Q96GX8 76 aa11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 GEMIN7Q9H840 131 aaKnown RBP11.06□□□□□ -0.64
RAPGEF3-203ENST00000395360 A4D1N5 150 aa11.05□□□□□ -0.64
RAPGEF3-203ENST00000395360 LINC00694P0DN24 101 aa11.05□□□□□ -0.64
RAPGEF3-203ENST00000395360 VSIG2Q96IQ7 327 aa11.05□□□□□ -0.64
RAPGEF3-203ENST00000395360 STAB1Q9NY15 2570 aa11.05□□□□□ -0.64
RAPGEF3-203ENST00000395360 GAGE12JA6NER3 117 aa11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 GAGE4Q13068 117 aa11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 GAGE5Q13069 117 aa11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 GAGE13Q4V321 117 aa11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 CSNK1G2-AS1Q8NCQ2 148 aa11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 C1QTNF4Q9BXJ3 329 aa11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 TRGV2A0A075B6R0 118 aa11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 GAGE7O76087 117 aa11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 GAGE12FP0CL80 117 aa11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 GAGE12GP0CL81 117 aa11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 GAGE12IP0CL82 117 aa11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 DAZ4Q86SG3 579 aaKnown RBP11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 MUSTN1Q8IVN3 82 aa11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 DAZ3Q9NR90 486 aaKnown RBP11.04□□□□□ -0.64
RAPGEF3-203ENST00000395360 J3QR89 54 aa11.03□□□□□ -0.64
RAPGEF3-203ENST00000395360 NTM-AS1Q6ZSK4 140 aa11.03□□□□□ -0.64
RAPGEF3-203ENST00000395360 CDKN2A-AS1Q9UH64 79 aa11.03□□□□□ -0.64
RAPGEF3-203ENST00000395360 NDUFA12Q9UI09 145 aa11.03□□□□□ -0.64
RAPGEF3-203ENST00000395360 UBE2D3P61077 147 aa11.03□□□□□ -0.64
RAPGEF3-203ENST00000395360 UBE2D2P62837 147 aa11.03□□□□□ -0.64
RAPGEF3-203ENST00000395360 SPATA25Q9BR10 227 aa11.03□□□□□ -0.64
RAPGEF3-203ENST00000395360 PRO1854Q9UHT4 67 aa11.03□□□□□ -0.64
RAPGEF3-203ENST00000395360 PF4P02776 101 aa11.02□□□□□ -0.64
RAPGEF3-203ENST00000395360 PRO0461Q9UI25 63 aa11.02□□□□□ -0.65
RAPGEF3-203ENST00000395360 PSMB2P49721 201 aa11.01□□□□□ -0.65
RAPGEF3-203ENST00000395360 LITAFQ99732 161 aa11.01□□□□□ -0.65
RAPGEF3-203ENST00000395360 EIF4EBP3O60516 100 aaPredicted RBP11.01□□□□□ -0.65
RAPGEF3-203ENST00000395360 TIRAPP58753 221 aa11.01□□□□□ -0.65
RAPGEF3-203ENST00000395360 COX6A2Q02221 97 aa11.01□□□□□ -0.65
RAPGEF3-203ENST00000395360 ETDBQ3ZM63 59 aa11.01□□□□□ -0.65
RAPGEF3-203ENST00000395360 SH2D6Q7Z4S9 175 aa11.01□□□□□ -0.65
RAPGEF3-203ENST00000395360 ANK2Q01484 3957 aa11□□□□□ -0.65
RAPGEF3-203ENST00000395360 IGLV5-45A0A087WSX0 123 aa11□□□□□ -0.65
RAPGEF3-203ENST00000395360 LOC100131303A0A0U1RQF7 123 aa11□□□□□ -0.65
RAPGEF3-203ENST00000395360 PRSS2P07478 247 aa11□□□□□ -0.65
RAPGEF3-203ENST00000395360 ADAMTSL4-AS1Q5T5F5 129 aa11□□□□□ -0.65
RAPGEF3-203ENST00000395360 LINC00242Q5T6M2 205 aa10.99□□□□□ -0.65
RAPGEF3-203ENST00000395360 OVOL2Q9BRP0 275 aa10.99□□□□□ -0.65
RAPGEF3-203ENST00000395360 CSDC2Q9Y534 153 aaKnown RBP10.99□□□□□ -0.65
RAPGEF3-203ENST00000395360 LYRM7Q5U5X0 104 aa10.98□□□□□ -0.65
RAPGEF3-203ENST00000395360 ZFAND6Q6FIF0 208 aa10.98□□□□□ -0.65
RAPGEF3-203ENST00000395360 LINC00482Q8N8I6 264 aa10.98□□□□□ -0.65
RAPGEF3-203ENST00000395360 SPATA3Q8NHX4 192 aa10.98□□□□□ -0.65
RAPGEF3-203ENST00000395360 TMEM101Q96IK0 257 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms