RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 FXYD2P54710 66 aa12□□□□□ -0.49
SLC6A4-202ENST00000394821 SBSPONQ8IVN8 264 aa12□□□□□ -0.49
SLC6A4-202ENST00000394821 TSPEAR-AS2P59090 65 aa11.99□□□□□ -0.49
SLC6A4-202ENST00000394821 GCSHP23434 173 aa11.99□□□□□ -0.49
SLC6A4-202ENST00000394821 RPL36AP83881 106 aaKnown RBP11.99□□□□□ -0.49
SLC6A4-202ENST00000394821 KPRPQ5T749 579 aaPredicted RBP11.99□□□□□ -0.49
SLC6A4-202ENST00000394821 RPL36ALQ969Q0 106 aaKnown RBP11.99□□□□□ -0.49
SLC6A4-202ENST00000394821 SPANXA1Q9NS26 97 aa11.99□□□□□ -0.49
SLC6A4-202ENST00000394821 ZNF22P17026 224 aaPredicted RBP11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 UBE2D3P61077 147 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 UBE2D2P62837 147 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 DEFB121Q5J5C9 76 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 NTM-AS1Q6ZSK4 140 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 LINC00612Q8N6U2 182 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 MRAPQ8TCY5 172 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 GAGE12JA6NER3 117 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 ZNF815PA8K554 130 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 CRYBA4P53673 196 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 GAGE4Q13068 117 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 GAGE5Q13069 117 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 GAGE13Q4V321 117 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 SVIPQ8NHG7 77 aa11.98□□□□□ -0.49
SLC6A4-202ENST00000394821 LOC100131303A0A0U1RQF7 123 aa11.97□□□□□ -0.49
SLC6A4-202ENST00000394821 A6NDN8 102 aa11.97□□□□□ -0.49
SLC6A4-202ENST00000394821 MIFP14174 115 aa11.97□□□□□ -0.49
SLC6A4-202ENST00000394821 HERVK_113P61574 105 aa11.97□□□□□ -0.49
SLC6A4-202ENST00000394821 Q6ZUT4 128 aa11.97□□□□□ -0.49
SLC6A4-202ENST00000394821 CEND1Q8N111 149 aa11.97□□□□□ -0.49
SLC6A4-202ENST00000394821 PLEKHB2Q96CS7 222 aa11.97□□□□□ -0.49
SLC6A4-202ENST00000394821 TM2D2Q9BX73 214 aa11.97□□□□□ -0.49
SLC6A4-202ENST00000394821 TMEM223A0PJW6 202 aa11.96□□□□□ -0.49
SLC6A4-202ENST00000394821 FHL2Q14192 279 aa11.96□□□□□ -0.49
SLC6A4-202ENST00000394821 HUWE1Q7Z6Z7 4374 aaKnown RBP11.96□□□□□ -0.49
SLC6A4-202ENST00000394821 LINC00694P0DN24 101 aa11.96□□□□□ -0.5
SLC6A4-202ENST00000394821 MRPS36P82909 103 aaKnown RBP11.96□□□□□ -0.5
SLC6A4-202ENST00000394821 DAZ4Q86SG3 579 aaKnown RBP11.96□□□□□ -0.5
SLC6A4-202ENST00000394821 DAZ3Q9NR90 486 aaKnown RBP11.96□□□□□ -0.5
SLC6A4-202ENST00000394821 TRBV6-4A0A1B0GX49 114 aa11.95□□□□□ -0.5
SLC6A4-202ENST00000394821 H3BRM9 83 aa11.94□□□□□ -0.5
SLC6A4-202ENST00000394821 CCL25O15444 150 aa11.94□□□□□ -0.5
SLC6A4-202ENST00000394821 TAL2Q16559 108 aa11.94□□□□□ -0.5
SLC6A4-202ENST00000394821 TRGV4A0A0C4DH28 118 aa11.94□□□□□ -0.5
SLC6A4-202ENST00000394821 IGHV3-64A0A075B6Q5 118 aa11.93□□□□□ -0.5
SLC6A4-202ENST00000394821 J3QQQ9 107 aa11.93□□□□□ -0.5
SLC6A4-202ENST00000394821 CIDEAO60543 219 aa11.93□□□□□ -0.5
SLC6A4-202ENST00000394821 HIST1H4GQ99525 98 aa11.93□□□□□ -0.5
SLC6A4-202ENST00000394821 LYRM9A8MSI8 78 aa11.92□□□□□ -0.5
SLC6A4-202ENST00000394821 K7ERJ3 54 aa11.92□□□□□ -0.5
SLC6A4-202ENST00000394821 UBE2V1Q13404 147 aa11.92□□□□□ -0.5
SLC6A4-202ENST00000394821 VAMP3Q15836 100 aa11.92□□□□□ -0.5
SLC6A4-202ENST00000394821 TIMM21Q9BVV7 248 aa11.92□□□□□ -0.5
SLC6A4-202ENST00000394821 SCGB1D4Q6XE38 83 aa11.92□□□□□ -0.5
SLC6A4-202ENST00000394821 RAB37Q96AX2 223 aa11.92□□□□□ -0.5
SLC6A4-202ENST00000394821 NAA38Q9BRA0 125 aaKnown RBP11.92□□□□□ -0.5
SLC6A4-202ENST00000394821 COL7A1Q02388 2944 aa11.92□□□□□ -0.5
SLC6A4-202ENST00000394821 PTTG1IPP53801 180 aa11.91□□□□□ -0.5
SLC6A4-202ENST00000394821 A0A0J9YY99 117 aa11.91□□□□□ -0.5
SLC6A4-202ENST00000394821 C9orf118A6NHY6 69 aa11.91□□□□□ -0.5
SLC6A4-202ENST00000394821 LEPROTO15243 131 aa11.91□□□□□ -0.5
SLC6A4-202ENST00000394821 AMMECR1LQ6DCA0 310 aa11.91□□□□□ -0.5
SLC6A4-202ENST00000394821 TINCRA0A1B0GVN0 87 aa11.9□□□□□ -0.5
SLC6A4-202ENST00000394821 UBE2D1P51668 147 aa11.9□□□□□ -0.5
SLC6A4-202ENST00000394821 DAD1P61803 113 aa11.9□□□□□ -0.5
SLC6A4-202ENST00000394821 NHP2Q9NX24 153 aaKnown RBP11.9□□□□□ -0.5
SLC6A4-202ENST00000394821 GTSF1LQ9H1H1 148 aa11.89□□□□□ -0.51
SLC6A4-202ENST00000394821 H3BUT2 72 aa11.89□□□□□ -0.51
SLC6A4-202ENST00000394821 SPART-AS1P0CW21 52 aa11.89□□□□□ -0.51
SLC6A4-202ENST00000394821 LGALS3P17931 250 aaKnown RBP11.89□□□□□ -0.51
SLC6A4-202ENST00000394821 DGAT2L7PQ6IED9 249 aa11.89□□□□□ -0.51
SLC6A4-202ENST00000394821 DNAH9Q9NYC9 4486 aa11.89□□□□□ -0.51
SLC6A4-202ENST00000394821 TRAV8-3A0A0A6YYJ7 113 aa11.88□□□□□ -0.51
SLC6A4-202ENST00000394821 A0A0J9YWU9 116 aa11.88□□□□□ -0.51
SLC6A4-202ENST00000394821 SMIM13P0DJ93 91 aa11.88□□□□□ -0.51
SLC6A4-202ENST00000394821 HTN3P15516 51 aa11.88□□□□□ -0.51
SLC6A4-202ENST00000394821 C12orf74Q32Q52 190 aa11.88□□□□□ -0.51
SLC6A4-202ENST00000394821 CSDC2Q9Y534 153 aaKnown RBP11.88□□□□□ -0.51
SLC6A4-202ENST00000394821 IGHV3-30-3P0DP02 117 aa11.87□□□□□ -0.51
SLC6A4-202ENST00000394821 OR5A1Q8NGJ0 315 aa11.86□□□□□ -0.51
SLC6A4-202ENST00000394821 TM2D3Q9BRN9 247 aa11.86□□□□□ -0.51
SLC6A4-202ENST00000394821 COX6A2Q02221 97 aa11.85□□□□□ -0.51
SLC6A4-202ENST00000394821 TMEM243Q9BU79 118 aa11.85□□□□□ -0.51
SLC6A4-202ENST00000394821 CDC42SE2Q9NRR3 84 aa11.85□□□□□ -0.51
SLC6A4-202ENST00000394821 SRSF9Q13242 221 aaKnown RBP eCLIP11.85□□□□□ -0.51
SLC6A4-202ENST00000394821 C10orf126Q8N4M7 172 aa11.85□□□□□ -0.51
SLC6A4-202ENST00000394821 VSIG2Q96IQ7 327 aa11.85□□□□□ -0.51
SLC6A4-202ENST00000394821 CDKN2A-AS1Q9UH64 79 aa11.85□□□□□ -0.51
SLC6A4-202ENST00000394821 IGLV5-45A0A087WSX0 123 aa11.84□□□□□ -0.51
SLC6A4-202ENST00000394821 A0A096LPF7 62 aa11.84□□□□□ -0.51
SLC6A4-202ENST00000394821 IGHV1-58A0A0C4DH39 117 aa11.84□□□□□ -0.51
SLC6A4-202ENST00000394821 SPINK8P0C7L1 97 aa11.84□□□□□ -0.51
SLC6A4-202ENST00000394821 LINC00242Q5T6M2 205 aa11.84□□□□□ -0.51
SLC6A4-202ENST00000394821 A0A1B0GWB2 263 aa11.84□□□□□ -0.51
SLC6A4-202ENST00000394821 F5H768 121 aa11.84□□□□□ -0.51
SLC6A4-202ENST00000394821 GYPEP15421 78 aa11.84□□□□□ -0.51
SLC6A4-202ENST00000394821 TIRAPP58753 221 aa11.84□□□□□ -0.51
SLC6A4-202ENST00000394821 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
SLC6A4-202ENST00000394821 SPANXB1Q9NS25 103 aaPredicted RBP11.83□□□□□ -0.52
SLC6A4-202ENST00000394821 TRBV6-8A0A0A6YYG3 113 aa11.82□□□□□ -0.52
SLC6A4-202ENST00000394821 A0A1W2PPM0 123 aa11.82□□□□□ -0.52
SLC6A4-202ENST00000394821 ATP5G1P05496 136 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms