RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 CLEC2BQ92478 149 aa8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 LINC00467Q9BRT7 94 aa8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 TLN2Q9Y4G6 2542 aa8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 K7EQD1 137 aa8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 INAFM2P0DMQ5 153 aa8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 LINC00315P59091 139 aa8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 TRBV30A0A0K0K1B3 111 aa8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 GAGE6Q13070 117 aa8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 DAZ2Q13117 558 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 C6orf226Q5I0X4 101 aa8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 CFAP161Q6P656 301 aa8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 DAZ4Q86SG3 579 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 NOP10Q9NPE3 64 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 DAZ3Q9NR90 486 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-209ENST00000394804 ABCA12Q86UK0 2595 aa8.59□□□□□ -1.03
UBE2D3-209ENST00000394804 TRIAP1O43715 76 aa8.59□□□□□ -1.03
UBE2D3-209ENST00000394804 CDKN2A-AS1Q9UH64 79 aa8.59□□□□□ -1.03
UBE2D3-209ENST00000394804 TRAV13-2A0A0B4J235 113 aa8.59□□□□□ -1.03
UBE2D3-209ENST00000394804 C4orf3Q8WVX3 66 aa8.59□□□□□ -1.03
UBE2D3-209ENST00000394804 C11orf68Q9H3H3 251 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-209ENST00000394804 TRAV26-1A0A087WT03 109 aa8.59□□□□□ -1.03
UBE2D3-209ENST00000394804 TMEM263Q8WUH6 116 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-209ENST00000394804 SONP18583 2426 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-209ENST00000394804 CCDC168Q8NDH2 2452 aa8.59□□□□□ -1.03
UBE2D3-209ENST00000394804 RNASE1P07998 156 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-209ENST00000394804 Q6YL49 198 aa8.58□□□□□ -1.04
UBE2D3-209ENST00000394804 ZNF580Q9UK33 172 aa8.58□□□□□ -1.04
UBE2D3-209ENST00000394804 CCL24O00175 119 aa8.58□□□□□ -1.04
UBE2D3-209ENST00000394804 POLQO75417 2590 aa8.58□□□□□ -1.04
UBE2D3-209ENST00000394804 DCHS2Q6V1P9 2916 aa8.58□□□□□ -1.04
UBE2D3-209ENST00000394804 MRPS36P82909 103 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-209ENST00000394804 GAGE2AQ6NT46 116 aa8.58□□□□□ -1.04
UBE2D3-209ENST00000394804 DEFB130BP0DP73 79 aa8.57□□□□□ -1.04
UBE2D3-209ENST00000394804 DEFB130AP0DP74 79 aa8.57□□□□□ -1.04
UBE2D3-209ENST00000394804 TRAV25A0A0B4J276 109 aa8.57□□□□□ -1.04
UBE2D3-209ENST00000394804 TRBV10-1A0A0K0K1A3 114 aa8.57□□□□□ -1.04
UBE2D3-209ENST00000394804 XGP55808 180 aa8.57□□□□□ -1.04
UBE2D3-209ENST00000394804 BAHCC1Q9P281 2608 aa8.57□□□□□ -1.04
UBE2D3-209ENST00000394804 TEX49A0A1B0GTD5 131 aa8.57□□□□□ -1.04
UBE2D3-209ENST00000394804 TACC2O95359 2948 aa8.57□□□□□ -1.04
UBE2D3-209ENST00000394804 POM121L12Q8N7R1 296 aa8.57□□□□□ -1.04
UBE2D3-209ENST00000394804 CELSR2Q9HCU4 2923 aa8.56□□□□□ -1.04
UBE2D3-209ENST00000394804 PFN2P35080 140 aa8.56□□□□□ -1.04
UBE2D3-209ENST00000394804 DEFB113Q30KQ7 82 aa8.56□□□□□ -1.04
UBE2D3-209ENST00000394804 SPANXDQ9BXN6 97 aa8.56□□□□□ -1.04
UBE2D3-209ENST00000394804 ZNF702PQ9H963 129 aa8.56□□□□□ -1.04
UBE2D3-209ENST00000394804 SPANXCQ9NY87 97 aa8.56□□□□□ -1.04
UBE2D3-209ENST00000394804 PRRC2AP48634 2157 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-209ENST00000394804 LRBAP50851 2863 aa8.56□□□□□ -1.04
UBE2D3-209ENST00000394804 PRO0461Q9UI25 63 aa8.56□□□□□ -1.04
UBE2D3-209ENST00000394804 BAALC-AS2P0C853 105 aa8.56□□□□□ -1.04
UBE2D3-209ENST00000394804 A8MZ25 164 aa8.55□□□□□ -1.04
UBE2D3-209ENST00000394804 B5MCH6 92 aa8.55□□□□□ -1.04
UBE2D3-209ENST00000394804 ACYP1P07311 99 aa8.55□□□□□ -1.04
UBE2D3-209ENST00000394804 MALP21145 153 aa8.55□□□□□ -1.04
UBE2D3-209ENST00000394804 TIRAPP58753 221 aa8.55□□□□□ -1.04
UBE2D3-209ENST00000394804 SS18Q15532 418 aa8.55□□□□□ -1.04
UBE2D3-209ENST00000394804 UBE2D4Q9Y2X8 147 aa8.55□□□□□ -1.04
UBE2D3-209ENST00000394804 DEFB114Q30KQ6 69 aa8.55□□□□□ -1.04
UBE2D3-209ENST00000394804 PIK3CD-AS1Q5SR53 167 aa8.55□□□□□ -1.04
UBE2D3-209ENST00000394804 NDUFA1O15239 70 aa8.54□□□□□ -1.04
UBE2D3-209ENST00000394804 PRM2P04554 102 aa8.54□□□□□ -1.04
UBE2D3-209ENST00000394804 ZNF575Q86XF7 245 aa8.54□□□□□ -1.04
UBE2D3-209ENST00000394804 MAP1AP78559 2803 aaPredicted RBP8.54□□□□□ -1.04
UBE2D3-209ENST00000394804 TIMM17BO60830 172 aa8.54□□□□□ -1.04
UBE2D3-209ENST00000394804 RNF183Q96D59 192 aa8.54□□□□□ -1.04
UBE2D3-209ENST00000394804 RS1O15537 224 aa8.54□□□□□ -1.04
UBE2D3-209ENST00000394804 C16orf74Q96GX8 76 aa8.54□□□□□ -1.04
UBE2D3-209ENST00000394804 IGHV4-31P0DP07 118 aa8.53□□□□□ -1.04
UBE2D3-209ENST00000394804 AMELXQ99217 191 aa8.53□□□□□ -1.04
UBE2D3-209ENST00000394804 TRAV4A0A0B4J268 109 aa8.53□□□□□ -1.04
UBE2D3-209ENST00000394804 LINC00308Q8TCZ7 52 aa8.53□□□□□ -1.04
UBE2D3-209ENST00000394804 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
UBE2D3-209ENST00000394804 Q6ZTI0 123 aa8.52□□□□□ -1.04
UBE2D3-209ENST00000394804 NBPF19A0A087WUL8 3843 aa8.52□□□□□ -1.05
UBE2D3-209ENST00000394804 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
UBE2D3-209ENST00000394804 C18orf65Q6ZTR6 163 aa8.52□□□□□ -1.05
UBE2D3-209ENST00000394804 COX7B2Q8TF08 81 aa8.52□□□□□ -1.05
UBE2D3-209ENST00000394804 CSMD2Q7Z408 3487 aa8.52□□□□□ -1.05
UBE2D3-209ENST00000394804 COX7A2LO14548 114 aa8.51□□□□□ -1.05
UBE2D3-209ENST00000394804 SETD2Q9BYW2 2564 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-209ENST00000394804 C5orf38Q86SI9 138 aa8.51□□□□□ -1.05
UBE2D3-209ENST00000394804 SS18L2Q9UHA2 77 aa8.51□□□□□ -1.05
UBE2D3-209ENST00000394804 MUC4Q99102 2169 aa8.51□□□□□ -1.05
UBE2D3-209ENST00000394804 HTN3P15516 51 aa8.51□□□□□ -1.05
UBE2D3-209ENST00000394804 CSMD1Q96PZ7 3565 aa8.5□□□□□ -1.05
UBE2D3-209ENST00000394804 LST1O00453 97 aa8.5□□□□□ -1.05
UBE2D3-209ENST00000394804 NDUFV3P56181 108 aaKnown RBP8.5□□□□□ -1.05
UBE2D3-209ENST00000394804 S100A7L2Q5SY68 101 aa8.5□□□□□ -1.05
UBE2D3-209ENST00000394804 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
UBE2D3-209ENST00000394804 CHCHD7Q9BUK0 85 aa8.5□□□□□ -1.05
UBE2D3-209ENST00000394804 CDIP1Q9H305 208 aa8.49□□□□□ -1.05
UBE2D3-209ENST00000394804 MRPL23Q16540 153 aaKnown RBP8.49□□□□□ -1.05
UBE2D3-209ENST00000394804 C9orf153Q5TBE3 101 aa8.49□□□□□ -1.05
UBE2D3-209ENST00000394804 H0YGX0 51 aa8.48□□□□□ -1.05
UBE2D3-209ENST00000394804 H7C423 109 aa8.48□□□□□ -1.05
UBE2D3-209ENST00000394804 ADAMTSL4-AS1Q5T5F5 129 aa8.48□□□□□ -1.05
UBE2D3-209ENST00000394804 XCL1P47992 114 aa8.47□□□□□ -1.05
UBE2D3-209ENST00000394804 UNC79Q9P2D8 2635 aa8.47□□□□□ -1.05
UBE2D3-209ENST00000394804 SETXQ7Z333 2677 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms