RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 C2CD3Q4AC94 2353 aa5.63□□□□□ -1.51
SYNE2-205ENST00000394768 MRPS36P82909 103 aaKnown RBP5.62□□□□□ -1.51
SYNE2-205ENST00000394768 ZNF524Q96C55 264 aa5.62□□□□□ -1.51
SYNE2-205ENST00000394768 MRGPRG-AS1Q2M3A8 158 aa5.62□□□□□ -1.51
SYNE2-205ENST00000394768 WFDC11Q8NEX6 87 aa5.62□□□□□ -1.51
SYNE2-205ENST00000394768 LELP1Q5T871 98 aa5.62□□□□□ -1.51
SYNE2-205ENST00000394768 DEFB114Q30KQ6 69 aa5.61□□□□□ -1.51
SYNE2-205ENST00000394768 PIK3CD-AS1Q5SR53 167 aa5.61□□□□□ -1.51
SYNE2-205ENST00000394768 F8P00451 2351 aa5.61□□□□□ -1.51
SYNE2-205ENST00000394768 C1orf158Q8N1D5 194 aa5.61□□□□□ -1.51
SYNE2-205ENST00000394768 PRORYQ9H606 182 aa5.61□□□□□ -1.51
SYNE2-205ENST00000394768 LTBP2Q14767 1821 aa5.61□□□□□ -1.51
SYNE2-205ENST00000394768 CHCHD7Q9BUK0 85 aa5.61□□□□□ -1.51
SYNE2-205ENST00000394768 TRBV30A0A0K0K1B3 111 aa5.61□□□□□ -1.51
SYNE2-205ENST00000394768 P0C879 139 aa5.61□□□□□ -1.51
SYNE2-205ENST00000394768 FAM167A-AS1Q96KT0 104 aa5.61□□□□□ -1.51
SYNE2-205ENST00000394768 COL4A6Q14031 1691 aa5.6□□□□□ -1.51
SYNE2-205ENST00000394768 IGHV4-31P0DP07 118 aa5.6□□□□□ -1.51
SYNE2-205ENST00000394768 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.6□□□□□ -1.51
SYNE2-205ENST00000394768 LY6G6CO95867 125 aa5.6□□□□□ -1.51
SYNE2-205ENST00000394768 NDUFV3P56181 108 aaKnown RBP5.6□□□□□ -1.51
SYNE2-205ENST00000394768 LIMD2Q9BT23 127 aa5.6□□□□□ -1.51
SYNE2-205ENST00000394768 FXYD2P54710 66 aa5.6□□□□□ -1.51
SYNE2-205ENST00000394768 Q6JHZ5 121 aa5.6□□□□□ -1.51
SYNE2-205ENST00000394768 Q6ZTI0 123 aa5.6□□□□□ -1.51
SYNE2-205ENST00000394768 SPINK6Q6UWN8 80 aa5.6□□□□□ -1.51
SYNE2-205ENST00000394768 PYGO1Q9Y3Y4 419 aa5.6□□□□□ -1.51
SYNE2-205ENST00000394768 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.59□□□□□ -1.51
SYNE2-205ENST00000394768 K7EQG2 157 aa5.59□□□□□ -1.51
SYNE2-205ENST00000394768 A0A096LNI7 61 aa5.59□□□□□ -1.51
SYNE2-205ENST00000394768 LINC00574Q9H8X3 128 aa5.59□□□□□ -1.51
SYNE2-205ENST00000394768 RSPO1Q2MKA7 263 aaPredicted RBP5.59□□□□□ -1.51
SYNE2-205ENST00000394768 ADAMTS20P59510 1910 aa5.59□□□□□ -1.51
SYNE2-205ENST00000394768 TMEM223A0PJW6 202 aa5.59□□□□□ -1.52
SYNE2-205ENST00000394768 KPRPQ5T749 579 aaPredicted RBP5.59□□□□□ -1.52
SYNE2-205ENST00000394768 MPLKIPQ8TAP9 179 aa5.59□□□□□ -1.52
SYNE2-205ENST00000394768 ENHOQ6UWT2 76 aa5.59□□□□□ -1.52
SYNE2-205ENST00000394768 C20orf197Q8N268 126 aa5.59□□□□□ -1.52
SYNE2-205ENST00000394768 Q8N7P7 452 aa5.58□□□□□ -1.52
SYNE2-205ENST00000394768 PLAC8L1A1L4L8 177 aa5.58□□□□□ -1.52
SYNE2-205ENST00000394768 Q6ZSR3 168 aa5.58□□□□□ -1.52
SYNE2-205ENST00000394768 LINC00308Q8TCZ7 52 aa5.58□□□□□ -1.52
SYNE2-205ENST00000394768 COL5A1P20908 1838 aaPredicted RBP5.58□□□□□ -1.52
SYNE2-205ENST00000394768 CFAP126Q5VTH2 177 aa5.58□□□□□ -1.52
SYNE2-205ENST00000394768 ZNF843Q8N446 348 aa5.58□□□□□ -1.52
SYNE2-205ENST00000394768 LINC00467Q9BRT7 94 aa5.58□□□□□ -1.52
SYNE2-205ENST00000394768 UNQ9165/PRO28630Q6UXU0 137 aa5.58□□□□□ -1.52
SYNE2-205ENST00000394768 INAFM1C9JVW0 142 aa5.58□□□□□ -1.52
SYNE2-205ENST00000394768 MSRB1Q9NZV6 116 aa5.57□□□□□ -1.52
SYNE2-205ENST00000394768 PSMG3-AS1Q96PY0 264 aa5.57□□□□□ -1.52
SYNE2-205ENST00000394768 CPAMD8Q8IZJ3 1885 aa5.57□□□□□ -1.52
SYNE2-205ENST00000394768 TLN2Q9Y4G6 2542 aa5.57□□□□□ -1.52
SYNE2-205ENST00000394768 LST1O00453 97 aa5.57□□□□□ -1.52
SYNE2-205ENST00000394768 ZNF73O43830 326 aaPredicted RBP5.57□□□□□ -1.52
SYNE2-205ENST00000394768 NEXN-AS1Q8NBZ9 246 aa5.57□□□□□ -1.52
SYNE2-205ENST00000394768 C3orf84H3BNL1 204 aa5.57□□□□□ -1.52
SYNE2-205ENST00000394768 RITA1Q96K30 269 aa5.57□□□□□ -1.52
SYNE2-205ENST00000394768 SDIM1Q6ZPB5 146 aa5.57□□□□□ -1.52
SYNE2-205ENST00000394768 IGLC6P0CF74 106 aa5.56□□□□□ -1.52
SYNE2-205ENST00000394768 IGKV2-28A0A075B6P5 120 aa5.56□□□□□ -1.52
SYNE2-205ENST00000394768 IGKV2D-28P01615 120 aa5.56□□□□□ -1.52
SYNE2-205ENST00000394768 LRP4O75096 1905 aa5.56□□□□□ -1.52
SYNE2-205ENST00000394768 PRAC2D3DTV9 90 aa5.56□□□□□ -1.52
SYNE2-205ENST00000394768 PATE2Q6UY27 113 aa5.56□□□□□ -1.52
SYNE2-205ENST00000394768 IGLV5-52A0A0A0MRZ9 124 aa5.56□□□□□ -1.52
SYNE2-205ENST00000394768 NRGNQ92686 78 aa5.55□□□□□ -1.52
SYNE2-205ENST00000394768 COL4A4P53420 1690 aaPredicted RBP5.55□□□□□ -1.52
SYNE2-205ENST00000394768 TRBV6-5A0A0K0K1A5 114 aa5.55□□□□□ -1.52
SYNE2-205ENST00000394768 Q8IZM0 81 aa5.55□□□□□ -1.52
SYNE2-205ENST00000394768 IGLV9-49A0A0B4J1Y8 123 aa5.55□□□□□ -1.52
SYNE2-205ENST00000394768 C6orf99Q4VX62 202 aa5.55□□□□□ -1.52
SYNE2-205ENST00000394768 MLST8Q9BVC4 326 aa5.55□□□□□ -1.52
SYNE2-205ENST00000394768 C20orf173Q96LM9 149 aa5.55□□□□□ -1.52
SYNE2-205ENST00000394768 WFDC2Q14508 124 aa5.55□□□□□ -1.52
SYNE2-205ENST00000394768 NRACQ8N912 160 aa5.55□□□□□ -1.52
SYNE2-205ENST00000394768 TRBV27A0A0K0K1C4 114 aa5.55□□□□□ -1.52
SYNE2-205ENST00000394768 NHLRC4P0CG21 123 aaPredicted RBP5.55□□□□□ -1.52
SYNE2-205ENST00000394768 REG3GQ6UW15 175 aa5.55□□□□□ -1.52
SYNE2-205ENST00000394768 IGLV4-3A0A075B6K6 122 aa5.54□□□□□ -1.52
SYNE2-205ENST00000394768 M0QY20 66 aa5.54□□□□□ -1.52
SYNE2-205ENST00000394768 LMO4P61968 165 aa5.54□□□□□ -1.52
SYNE2-205ENST00000394768 XAGE1AQ9HD64 81 aa5.54□□□□□ -1.52
SYNE2-205ENST00000394768 FN1P02751 2386 aaKnown RBP5.54□□□□□ -1.52
SYNE2-205ENST00000394768 CDKN2A-AS1Q9UH64 79 aa5.54□□□□□ -1.52
SYNE2-205ENST00000394768 NDUFA7O95182 113 aa5.54□□□□□ -1.52
SYNE2-205ENST00000394768 TP73-AS1Q9UF72 201 aa5.53□□□□□ -1.52
SYNE2-205ENST00000394768 LINC00337Q8N6G1 96 aa5.53□□□□□ -1.52
SYNE2-205ENST00000394768 ESRGQ1W209 222 aa5.53□□□□□ -1.52
SYNE2-205ENST00000394768 CLUHP3Q96NS8 147 aa5.53□□□□□ -1.52
SYNE2-205ENST00000394768 ABCA12Q86UK0 2595 aa5.53□□□□□ -1.52
SYNE2-205ENST00000394768 TRBV7-6A0A0J9YX20 115 aa5.53□□□□□ -1.52
SYNE2-205ENST00000394768 RBX1P62877 108 aa5.53□□□□□ -1.52
SYNE2-205ENST00000394768 DCANP1Q8TF63 244 aa5.53□□□□□ -1.52
SYNE2-205ENST00000394768 WFDC10AQ9H1F0 79 aa5.53□□□□□ -1.52
SYNE2-205ENST00000394768 LINC00482Q8N8I6 264 aa5.53□□□□□ -1.52
SYNE2-205ENST00000394768 EGFEM1PQ0D2K5 195 aa5.52□□□□□ -1.53
SYNE2-205ENST00000394768 EBI3Q14213 229 aa5.52□□□□□ -1.53
SYNE2-205ENST00000394768 M0QXV9 152 aa5.52□□□□□ -1.53
SYNE2-205ENST00000394768 LY6G6DO95868 133 aa5.52□□□□□ -1.53
SYNE2-205ENST00000394768 WFDC13Q8IUB5 93 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms