RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TIMM21Q9BVV7 248 aa9.73□□□□□ -0.85
GTF2F1-201ENST00000394456 C1QTNF4Q9BXJ3 329 aa9.73□□□□□ -0.85
GTF2F1-201ENST00000394456 UBE2D4Q9Y2X8 147 aa9.73□□□□□ -0.85
GTF2F1-201ENST00000394456 A8MTW9 85 aa9.72□□□□□ -0.85
GTF2F1-201ENST00000394456 FN1P02751 2386 aaKnown RBP9.72□□□□□ -0.85
GTF2F1-201ENST00000394456 PRSS2P07478 247 aa9.72□□□□□ -0.85
GTF2F1-201ENST00000394456 MRPS36P82909 103 aaKnown RBP9.71□□□□□ -0.85
GTF2F1-201ENST00000394456 ZNF415Q09FC8 603 aa9.71□□□□□ -0.85
GTF2F1-201ENST00000394456 A8MWV9 139 aa9.7□□□□□ -0.86
GTF2F1-201ENST00000394456 COX6A2Q02221 97 aa9.7□□□□□ -0.86
GTF2F1-201ENST00000394456 SPATA25Q9BR10 227 aa9.7□□□□□ -0.86
GTF2F1-201ENST00000394456 WFDC10AQ9H1F0 79 aa9.7□□□□□ -0.86
GTF2F1-201ENST00000394456 CDIP1Q9H305 208 aa9.7□□□□□ -0.86
GTF2F1-201ENST00000394456 C1orf158Q8N1D5 194 aa9.7□□□□□ -0.86
GTF2F1-201ENST00000394456 LINC00694P0DN24 101 aa9.69□□□□□ -0.86
GTF2F1-201ENST00000394456 ANKRD29Q8N6D5 301 aa9.69□□□□□ -0.86
GTF2F1-201ENST00000394456 CDKN2A-AS1Q9UH64 79 aa9.69□□□□□ -0.86
GTF2F1-201ENST00000394456 PYGO1Q9Y3Y4 419 aa9.69□□□□□ -0.86
GTF2F1-201ENST00000394456 NSD1Q96L73 2696 aaPredicted RBP9.69□□□□□ -0.86
GTF2F1-201ENST00000394456 NDUFA12Q9UI09 145 aa9.69□□□□□ -0.86
GTF2F1-201ENST00000394456 A0A0U1RRA0 63 aa9.69□□□□□ -0.86
GTF2F1-201ENST00000394456 C9JAW5 83 aa9.69□□□□□ -0.86
GTF2F1-201ENST00000394456 HILS1P60008 231 aa9.69□□□□□ -0.86
GTF2F1-201ENST00000394456 Q1RN00 199 aa9.69□□□□□ -0.86
GTF2F1-201ENST00000394456 TRGV1A0A0A0MS02 117 aa9.68□□□□□ -0.86
GTF2F1-201ENST00000394456 J3QR89 54 aa9.68□□□□□ -0.86
GTF2F1-201ENST00000394456 ZNF625Q96I27 306 aaPredicted RBP9.68□□□□□ -0.86
GTF2F1-201ENST00000394456 ERG28Q9UKR5 140 aa9.68□□□□□ -0.86
GTF2F1-201ENST00000394456 IGHV1-58A0A0C4DH39 117 aa9.68□□□□□ -0.86
GTF2F1-201ENST00000394456 Q6ZTI0 123 aa9.68□□□□□ -0.86
GTF2F1-201ENST00000394456 VSIG2Q96IQ7 327 aa9.68□□□□□ -0.86
GTF2F1-201ENST00000394456 C16orf95Q9H693 158 aa9.68□□□□□ -0.86
GTF2F1-201ENST00000394456 INSP01308 110 aa9.67□□□□□ -0.86
GTF2F1-201ENST00000394456 EDA2RQ9HAV5 297 aa9.67□□□□□ -0.86
GTF2F1-201ENST00000394456 LY6G6DO95868 133 aa9.67□□□□□ -0.86
GTF2F1-201ENST00000394456 MT-ATP8P03928 68 aa9.67□□□□□ -0.86
GTF2F1-201ENST00000394456 TRIAP1O43715 76 aa9.66□□□□□ -0.86
GTF2F1-201ENST00000394456 RS1O15537 224 aa9.66□□□□□ -0.86
GTF2F1-201ENST00000394456 TEN1Q86WV5 123 aa9.66□□□□□ -0.86
GTF2F1-201ENST00000394456 HIVEP1P15822 2718 aa9.66□□□□□ -0.86
GTF2F1-201ENST00000394456 XGP55808 180 aa9.65□□□□□ -0.86
GTF2F1-201ENST00000394456 BEAN1Q3B7T3 259 aa9.65□□□□□ -0.86
GTF2F1-201ENST00000394456 VWFP04275 2813 aa9.65□□□□□ -0.86
GTF2F1-201ENST00000394456 TINCRA0A1B0GVN0 87 aa9.65□□□□□ -0.86
GTF2F1-201ENST00000394456 A0A0B4J2C4 111 aa9.64□□□□□ -0.87
GTF2F1-201ENST00000394456 SLC25A20O43772 301 aa9.64□□□□□ -0.87
GTF2F1-201ENST00000394456 NTM-AS1Q6ZSK4 140 aa9.64□□□□□ -0.87
GTF2F1-201ENST00000394456 SBSPONQ8IVN8 264 aa9.64□□□□□ -0.87
GTF2F1-201ENST00000394456 STHQ8IWL8 128 aa9.64□□□□□ -0.87
GTF2F1-201ENST00000394456 GEMIN7Q9H840 131 aaKnown RBP9.64□□□□□ -0.87
GTF2F1-201ENST00000394456 TMEM101Q96IK0 257 aa9.64□□□□□ -0.87
GTF2F1-201ENST00000394456 SPANXA1Q9NS26 97 aa9.64□□□□□ -0.87
GTF2F1-201ENST00000394456 TRBV20-1A0A075B6N2 111 aa9.63□□□□□ -0.87
GTF2F1-201ENST00000394456 LOC100131303A0A0U1RQF7 123 aa9.63□□□□□ -0.87
GTF2F1-201ENST00000394456 TENM1Q9UKZ4 2725 aa9.63□□□□□ -0.87
GTF2F1-201ENST00000394456 NBEAL2Q6ZNJ1 2754 aa9.63□□□□□ -0.87
GTF2F1-201ENST00000394456 TRAV13-1A0A0B4J241 112 aa9.63□□□□□ -0.87
GTF2F1-201ENST00000394456 TRAV25A0A0B4J276 109 aa9.63□□□□□ -0.87
GTF2F1-201ENST00000394456 ATP6V0E2Q8NHE4 81 aa9.63□□□□□ -0.87
GTF2F1-201ENST00000394456 PPDPFLQ8WWR9 84 aa9.63□□□□□ -0.87
GTF2F1-201ENST00000394456 CLEC2BQ92478 149 aa9.63□□□□□ -0.87
GTF2F1-201ENST00000394456 GAGE12JA6NER3 117 aa9.62□□□□□ -0.87
GTF2F1-201ENST00000394456 GAGE4Q13068 117 aa9.62□□□□□ -0.87
GTF2F1-201ENST00000394456 GAGE5Q13069 117 aa9.62□□□□□ -0.87
GTF2F1-201ENST00000394456 LYRM7Q5U5X0 104 aa9.62□□□□□ -0.87
GTF2F1-201ENST00000394456 DGAT2L7PQ6IED9 249 aa9.62□□□□□ -0.87
GTF2F1-201ENST00000394456 NOP10Q9NPE3 64 aaKnown RBP9.62□□□□□ -0.87
GTF2F1-201ENST00000394456 GIG44P09565 113 aaPredicted RBP9.62□□□□□ -0.87
GTF2F1-201ENST00000394456 RPL35AP18077 110 aaKnown RBP9.62□□□□□ -0.87
GTF2F1-201ENST00000394456 KRTAP10-3P60369 221 aa9.62□□□□□ -0.87
GTF2F1-201ENST00000394456 INAFM1C9JVW0 142 aa9.61□□□□□ -0.87
GTF2F1-201ENST00000394456 MIAQ16674 131 aa9.61□□□□□ -0.87
GTF2F1-201ENST00000394456 LINC00242Q5T6M2 205 aa9.61□□□□□ -0.87
GTF2F1-201ENST00000394456 ZFAND6Q6FIF0 208 aa9.61□□□□□ -0.87
GTF2F1-201ENST00000394456 NTN5Q8WTR8 489 aaPredicted RBP9.61□□□□□ -0.87
GTF2F1-201ENST00000394456 LINC01620Q4KN68 170 aa9.6□□□□□ -0.87
GTF2F1-201ENST00000394456 TEX49A0A1B0GTD5 131 aa9.6□□□□□ -0.87
GTF2F1-201ENST00000394456 IL17DQ8TAD2 202 aa9.6□□□□□ -0.87
GTF2F1-201ENST00000394456 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.59□□□□□ -0.87
GTF2F1-201ENST00000394456 Q9H8V8 135 aa9.59□□□□□ -0.87
GTF2F1-201ENST00000394456 ICOSQ9Y6W8 199 aa9.59□□□□□ -0.87
GTF2F1-201ENST00000394456 ATRQ13535 2644 aa9.59□□□□□ -0.87
GTF2F1-201ENST00000394456 SPANXDQ9BXN6 97 aa9.59□□□□□ -0.87
GTF2F1-201ENST00000394456 SPANXCQ9NY87 97 aa9.59□□□□□ -0.87
GTF2F1-201ENST00000394456 GAGE7O76087 117 aa9.58□□□□□ -0.88
GTF2F1-201ENST00000394456 GAGE12FP0CL80 117 aa9.58□□□□□ -0.88
GTF2F1-201ENST00000394456 GAGE12GP0CL81 117 aa9.58□□□□□ -0.88
GTF2F1-201ENST00000394456 GAGE12IP0CL82 117 aa9.58□□□□□ -0.88
GTF2F1-201ENST00000394456 CRYBA4P53673 196 aa9.58□□□□□ -0.88
GTF2F1-201ENST00000394456 DNAJC30Q96LL9 226 aa9.58□□□□□ -0.88
GTF2F1-201ENST00000394456 IGLV1-51P01701 117 aa9.58□□□□□ -0.88
GTF2F1-201ENST00000394456 PIK3CD-AS1Q5SR53 167 aa9.58□□□□□ -0.88
GTF2F1-201ENST00000394456 SOSTDC1Q6X4U4 206 aa9.58□□□□□ -0.88
GTF2F1-201ENST00000394456 RPL13AP40429 203 aaKnown RBP9.57□□□□□ -0.88
GTF2F1-201ENST00000394456 IGKV3OR2-268A0A0C4DH90 116 aa9.57□□□□□ -0.88
GTF2F1-201ENST00000394456 K7EQD1 137 aa9.57□□□□□ -0.88
GTF2F1-201ENST00000394456 PLAC8L1A1L4L8 177 aa9.56□□□□□ -0.88
GTF2F1-201ENST00000394456 IGLV5-45A0A087WSX0 123 aa9.56□□□□□ -0.88
GTF2F1-201ENST00000394456 TRBV30A0A0K0K1B3 111 aa9.56□□□□□ -0.88
GTF2F1-201ENST00000394456 SMIM1B2RUZ4 78 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms