RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 A0A0J9YWU9 116 aa13.74□□□□□ -0.21
RAB5C-202ENST00000393860 DGAT2L7PQ6IED9 249 aa13.74□□□□□ -0.21
RAB5C-202ENST00000393860 ATP6V0E2Q8NHE4 81 aa13.74□□□□□ -0.21
RAB5C-202ENST00000393860 AMELXQ99217 191 aa13.74□□□□□ -0.21
RAB5C-202ENST00000393860 A0A0J9YXV3 536 aa13.73□□□□□ -0.21
RAB5C-202ENST00000393860 UBE2L6O14933 153 aa13.73□□□□□ -0.21
RAB5C-202ENST00000393860 KPRPQ5T749 579 aaPredicted RBP13.73□□□□□ -0.21
RAB5C-202ENST00000393860 CHAC1Q9BUX1 264 aa13.73□□□□□ -0.21
RAB5C-202ENST00000393860 NBEAL1Q6ZS30 2694 aa13.73□□□□□ -0.21
RAB5C-202ENST00000393860 GAGE6Q13070 117 aa13.72□□□□□ -0.21
RAB5C-202ENST00000393860 PAPPA-AS1Q5QFB9 102 aa13.72□□□□□ -0.21
RAB5C-202ENST00000393860 TRBV6-8A0A0A6YYG3 113 aa13.72□□□□□ -0.21
RAB5C-202ENST00000393860 EREGO14944 169 aa13.71□□□□□ -0.21
RAB5C-202ENST00000393860 TMEM170BQ5T4T1 132 aa13.71□□□□□ -0.21
RAB5C-202ENST00000393860 TEX48A0A1B0GUV7 120 aa13.7□□□□□ -0.22
RAB5C-202ENST00000393860 AMMECR1LQ6DCA0 310 aa13.7□□□□□ -0.22
RAB5C-202ENST00000393860 TIMM21Q9BVV7 248 aa13.7□□□□□ -0.22
RAB5C-202ENST00000393860 C11orf68Q9H3H3 251 aaKnown RBP13.7□□□□□ -0.22
RAB5C-202ENST00000393860 TENM3Q9P273 2699 aa13.7□□□□□ -0.22
RAB5C-202ENST00000393860 CHCHD5Q9BSY4 110 aa13.7□□□□□ -0.22
RAB5C-202ENST00000393860 Q6ZTC4 211 aa13.69□□□□□ -0.22
RAB5C-202ENST00000393860 MGAM2Q2M2H8 2515 aa13.69□□□□□ -0.22
RAB5C-202ENST00000393860 TRAV8-6A0A0B4J262 113 aa13.68□□□□□ -0.22
RAB5C-202ENST00000393860 NPSP0C0P6 89 aa13.68□□□□□ -0.22
RAB5C-202ENST00000393860 MRPS36P82909 103 aaKnown RBP13.68□□□□□ -0.22
RAB5C-202ENST00000393860 MRPL52Q86TS9 123 aaKnown RBP13.68□□□□□ -0.22
RAB5C-202ENST00000393860 NFE4Q86UQ8 179 aa13.68□□□□□ -0.22
RAB5C-202ENST00000393860 BOD1L2Q8IYS8 172 aa13.68□□□□□ -0.22
RAB5C-202ENST00000393860 SNHG12Q9BXW3 62 aa13.68□□□□□ -0.22
RAB5C-202ENST00000393860 C2orf91Q6ZV80 131 aa13.68□□□□□ -0.22
RAB5C-202ENST00000393860 OR5A1Q8NGJ0 315 aa13.68□□□□□ -0.22
RAB5C-202ENST00000393860 C2orf88Q9BSF0 95 aa13.68□□□□□ -0.22
RAB5C-202ENST00000393860 NANOS2P60321 138 aaKnown RBP13.67□□□□□ -0.22
RAB5C-202ENST00000393860 BATFQ16520 125 aa13.67□□□□□ -0.22
RAB5C-202ENST00000393860 SPATA25Q9BR10 227 aa13.67□□□□□ -0.22
RAB5C-202ENST00000393860 CBY1Q9Y3M2 126 aa13.67□□□□□ -0.22
RAB5C-202ENST00000393860 ZNF22P17026 224 aaPredicted RBP13.66□□□□□ -0.22
RAB5C-202ENST00000393860 MAPKAPK5-AS1Q8N8E1 139 aa13.66□□□□□ -0.22
RAB5C-202ENST00000393860 TMEM101Q96IK0 257 aa13.66□□□□□ -0.22
RAB5C-202ENST00000393860 TM2D3Q9BRN9 247 aa13.66□□□□□ -0.22
RAB5C-202ENST00000393860 MRPS16Q9Y3D3 137 aaKnown RBP13.66□□□□□ -0.22
RAB5C-202ENST00000393860 IGHV3-64A0A075B6Q5 118 aa13.65□□□□□ -0.22
RAB5C-202ENST00000393860 UBE2D1P51668 147 aa13.65□□□□□ -0.22
RAB5C-202ENST00000393860 TMEM97Q5BJF2 176 aa13.65□□□□□ -0.22
RAB5C-202ENST00000393860 CDC42SE2Q9NRR3 84 aa13.65□□□□□ -0.22
RAB5C-202ENST00000393860 E9PLD3 99 aa13.64□□□□□ -0.23
RAB5C-202ENST00000393860 CSDC2Q9Y534 153 aaKnown RBP13.64□□□□□ -0.23
RAB5C-202ENST00000393860 IGLV4-60A0A075B6I1 120 aa13.64□□□□□ -0.23
RAB5C-202ENST00000393860 M0R143 59 aa13.64□□□□□ -0.23
RAB5C-202ENST00000393860 HINT1P49773 126 aaPredicted RBP13.64□□□□□ -0.23
RAB5C-202ENST00000393860 TRAV13-1A0A0B4J241 112 aa13.63□□□□□ -0.23
RAB5C-202ENST00000393860 H7C423 109 aa13.63□□□□□ -0.23
RAB5C-202ENST00000393860 HERVK_113P61574 105 aa13.63□□□□□ -0.23
RAB5C-202ENST00000393860 C11orf45Q8TAV5 145 aa13.63□□□□□ -0.23
RAB5C-202ENST00000393860 ICOSQ9Y6W8 199 aa13.63□□□□□ -0.23
RAB5C-202ENST00000393860 SMAGPQ0VAQ4 97 aa13.62□□□□□ -0.23
RAB5C-202ENST00000393860 MRPL23Q16540 153 aaKnown RBP13.62□□□□□ -0.23
RAB5C-202ENST00000393860 IGKV3OR2-268A0A0C4DH90 116 aa13.62□□□□□ -0.23
RAB5C-202ENST00000393860 TMEM223A0PJW6 202 aa13.62□□□□□ -0.23
RAB5C-202ENST00000393860 TMEM262E9PQX1 116 aa13.62□□□□□ -0.23
RAB5C-202ENST00000393860 TINCRA0A1B0GVN0 87 aa13.61□□□□□ -0.23
RAB5C-202ENST00000393860 DLEU1O43261 78 aa13.61□□□□□ -0.23
RAB5C-202ENST00000393860 TSPEAR-AS2P59090 65 aa13.61□□□□□ -0.23
RAB5C-202ENST00000393860 COX6A2Q02221 97 aa13.6□□□□□ -0.23
RAB5C-202ENST00000393860 GEMIN7Q9H840 131 aaKnown RBP13.6□□□□□ -0.23
RAB5C-202ENST00000393860 ZNF25P17030 456 aaPredicted RBP13.6□□□□□ -0.23
RAB5C-202ENST00000393860 MPV17L2Q567V2 206 aa13.6□□□□□ -0.23
RAB5C-202ENST00000393860 HUWE1Q7Z6Z7 4374 aaKnown RBP13.59□□□□□ -0.23
RAB5C-202ENST00000393860 LINC00242Q5T6M2 205 aa13.58□□□□□ -0.23
RAB5C-202ENST00000393860 Q8N3U1 123 aa13.58□□□□□ -0.23
RAB5C-202ENST00000393860 TRAV8-3A0A0A6YYJ7 113 aa13.58□□□□□ -0.24
RAB5C-202ENST00000393860 SPINK8P0C7L1 97 aa13.58□□□□□ -0.24
RAB5C-202ENST00000393860 PCP4P48539 62 aa13.57□□□□□ -0.24
RAB5C-202ENST00000393860 CDKN2A-AS1Q9UH64 79 aa13.57□□□□□ -0.24
RAB5C-202ENST00000393860 DEFB131BA0A096LNP1 70 aa13.56□□□□□ -0.24
RAB5C-202ENST00000393860 MYMXA0A1B0GTQ4 84 aa13.56□□□□□ -0.24
RAB5C-202ENST00000393860 ZNF815PA8K554 130 aa13.56□□□□□ -0.24
RAB5C-202ENST00000393860 RBX1P62877 108 aa13.56□□□□□ -0.24
RAB5C-202ENST00000393860 C21orf62-AS1Q17RA5 79 aa13.56□□□□□ -0.24
RAB5C-202ENST00000393860 LEPROTO15243 131 aa13.55□□□□□ -0.24
RAB5C-202ENST00000393860 SIVA1O15304 175 aa13.55□□□□□ -0.24
RAB5C-202ENST00000393860 CLPSL2Q6UWE3 100 aa13.55□□□□□ -0.24
RAB5C-202ENST00000393860 J3QQQ9 107 aa13.54□□□□□ -0.24
RAB5C-202ENST00000393860 TIRAPP58753 221 aa13.54□□□□□ -0.24
RAB5C-202ENST00000393860 PLEKHB2Q96CS7 222 aa13.54□□□□□ -0.24
RAB5C-202ENST00000393860 LGALS3P17931 250 aaKnown RBP13.54□□□□□ -0.24
RAB5C-202ENST00000393860 HERVK_113P63121 156 aa13.53□□□□□ -0.24
RAB5C-202ENST00000393860 IGHV3-30-3P0DP02 117 aa13.52□□□□□ -0.24
RAB5C-202ENST00000393860 BVES-AS1Q5T3Y7 98 aa13.52□□□□□ -0.24
RAB5C-202ENST00000393860 LYPD5Q6UWN5 251 aa13.52□□□□□ -0.24
RAB5C-202ENST00000393860 SH2D6Q7Z4S9 175 aa13.52□□□□□ -0.24
RAB5C-202ENST00000393860 IGLV5-45A0A087WSX0 123 aa13.52□□□□□ -0.25
RAB5C-202ENST00000393860 LELP1Q5T871 98 aa13.52□□□□□ -0.25
RAB5C-202ENST00000393860 FAM19A3Q7Z5A8 133 aa13.52□□□□□ -0.25
RAB5C-202ENST00000393860 IGHV1-58A0A0C4DH39 117 aa13.51□□□□□ -0.25
RAB5C-202ENST00000393860 A0A1B0GUV1 79 aa13.51□□□□□ -0.25
RAB5C-202ENST00000393860 A6NJY4 79 aa13.51□□□□□ -0.25
RAB5C-202ENST00000393860 HIGD1BQ9P298 99 aa13.51□□□□□ -0.25
RAB5C-202ENST00000393860 H3BNG1 76 aa13.5□□□□□ -0.25
RAB5C-202ENST00000393860 H3BRM9 83 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms