RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 C1orf158Q8N1D5 194 aa13.54□□□□□ -0.24
CBX1-202ENST00000393408 TEX15Q9BXT5 2789 aa13.54□□□□□ -0.24
CBX1-202ENST00000393408 RPL13AP40429 203 aaKnown RBP13.53□□□□□ -0.24
CBX1-202ENST00000393408 DEFB113Q30KQ7 82 aa13.52□□□□□ -0.24
CBX1-202ENST00000393408 DAND5Q8N907 189 aa13.52□□□□□ -0.24
CBX1-202ENST00000393408 IGLV5-39A0A0G2JS06 123 aa13.52□□□□□ -0.25
CBX1-202ENST00000393408 COX6CP09669 75 aa13.52□□□□□ -0.25
CBX1-202ENST00000393408 CENPEQ02224 2701 aa13.52□□□□□ -0.25
CBX1-202ENST00000393408 FAM208BQ5VWN6 2430 aa13.52□□□□□ -0.25
CBX1-202ENST00000393408 TRGV1A0A0A0MS02 117 aa13.51□□□□□ -0.25
CBX1-202ENST00000393408 LINC00242Q5T6M2 205 aa13.51□□□□□ -0.25
CBX1-202ENST00000393408 TEX49A0A1B0GTD5 131 aa13.51□□□□□ -0.25
CBX1-202ENST00000393408 H7C423 109 aa13.51□□□□□ -0.25
CBX1-202ENST00000393408 LINC00694P0DN24 101 aa13.51□□□□□ -0.25
CBX1-202ENST00000393408 HERVK_113P63121 156 aa13.51□□□□□ -0.25
CBX1-202ENST00000393408 STHQ8IWL8 128 aa13.51□□□□□ -0.25
CBX1-202ENST00000393408 MYO9AB2RTY4 2548 aa13.5□□□□□ -0.25
CBX1-202ENST00000393408 ZNF462Q96JM2 2506 aa13.5□□□□□ -0.25
CBX1-202ENST00000393408 TRAV25A0A0B4J276 109 aa13.5□□□□□ -0.25
CBX1-202ENST00000393408 FAM19A3Q7Z5A8 133 aa13.5□□□□□ -0.25
CBX1-202ENST00000393408 C2orf82Q6UX34 121 aa13.5□□□□□ -0.25
CBX1-202ENST00000393408 Q96MF0 132 aa13.5□□□□□ -0.25
CBX1-202ENST00000393408 CLEC2BQ92478 149 aa13.49□□□□□ -0.25
CBX1-202ENST00000393408 CITED1Q99966 193 aa13.49□□□□□ -0.25
CBX1-202ENST00000393408 LST1O00453 97 aa13.49□□□□□ -0.25
CBX1-202ENST00000393408 CIRBPQ14011 172 aaKnown RBP13.49□□□□□ -0.25
CBX1-202ENST00000393408 LRRC75A-AS1Q8N1F1 130 aa13.49□□□□□ -0.25
CBX1-202ENST00000393408 UBE2WQ96B02 151 aa13.49□□□□□ -0.25
CBX1-202ENST00000393408 Q9H8V8 135 aa13.49□□□□□ -0.25
CBX1-202ENST00000393408 PTPN13Q12923 2485 aa13.49□□□□□ -0.25
CBX1-202ENST00000393408 H3BT86 120 aa13.48□□□□□ -0.25
CBX1-202ENST00000393408 BBC3Q96PG8 261 aaPredicted RBP13.48□□□□□ -0.25
CBX1-202ENST00000393408 TRBV10-1A0A0K0K1A3 114 aa13.48□□□□□ -0.25
CBX1-202ENST00000393408 K7EQD1 137 aa13.48□□□□□ -0.25
CBX1-202ENST00000393408 RPL36AP83881 106 aaKnown RBP13.48□□□□□ -0.25
CBX1-202ENST00000393408 NTM-AS1Q6ZSK4 140 aa13.48□□□□□ -0.25
CBX1-202ENST00000393408 RPL36ALQ969Q0 106 aaKnown RBP13.48□□□□□ -0.25
CBX1-202ENST00000393408 CSDC2Q9Y534 153 aaKnown RBP13.48□□□□□ -0.25
CBX1-202ENST00000393408 NDUFA7O95182 113 aa13.47□□□□□ -0.25
CBX1-202ENST00000393408 TMEM86BQ8N661 226 aa13.47□□□□□ -0.25
CBX1-202ENST00000393408 LINC00308Q8TCZ7 52 aa13.47□□□□□ -0.25
CBX1-202ENST00000393408 CITED2Q99967 270 aaPredicted RBP13.47□□□□□ -0.25
CBX1-202ENST00000393408 LRRK2Q5S007 2527 aa13.47□□□□□ -0.25
CBX1-202ENST00000393408 AKAP9Q99996 3911 aa13.47□□□□□ -0.25
CBX1-202ENST00000393408 SMIM1B2RUZ4 78 aa13.47□□□□□ -0.25
CBX1-202ENST00000393408 Q6ZTI0 123 aa13.47□□□□□ -0.25
CBX1-202ENST00000393408 DAZ2Q13117 558 aaKnown RBP13.45□□□□□ -0.26
CBX1-202ENST00000393408 DAZ4Q86SG3 579 aaKnown RBP13.45□□□□□ -0.26
CBX1-202ENST00000393408 DAZ3Q9NR90 486 aaKnown RBP13.45□□□□□ -0.26
CBX1-202ENST00000393408 NAV2Q8IVL1 2488 aa13.45□□□□□ -0.26
CBX1-202ENST00000393408 TRAV8-4A0A0B4J246 113 aa13.45□□□□□ -0.26
CBX1-202ENST00000393408 CHD6Q8TD26 2715 aa13.45□□□□□ -0.26
CBX1-202ENST00000393408 KRTAP1-3Q8IUG1 177 aa13.44□□□□□ -0.26
CBX1-202ENST00000393408 UBR5O95071 2799 aaPredicted RBP13.44□□□□□ -0.26
CBX1-202ENST00000393408 TRAV13-1A0A0B4J241 112 aa13.44□□□□□ -0.26
CBX1-202ENST00000393408 TRAV4A0A0B4J268 109 aa13.44□□□□□ -0.26
CBX1-202ENST00000393408 TEX29Q8N6K0 151 aa13.44□□□□□ -0.26
CBX1-202ENST00000393408 ZNF625Q96I27 306 aaPredicted RBP13.44□□□□□ -0.26
CBX1-202ENST00000393408 A0A1W2PRX2 142 aa13.43□□□□□ -0.26
CBX1-202ENST00000393408 ABCA12Q86UK0 2595 aa13.43□□□□□ -0.26
CBX1-202ENST00000393408 C11orf44Q8N8P7 122 aa13.43□□□□□ -0.26
CBX1-202ENST00000393408 CDC42SE2Q9NRR3 84 aa13.43□□□□□ -0.26
CBX1-202ENST00000393408 TRAV26-1A0A087WT03 109 aa13.42□□□□□ -0.26
CBX1-202ENST00000393408 CCL24O00175 119 aa13.42□□□□□ -0.26
CBX1-202ENST00000393408 GAGE12JA6NER3 117 aa13.42□□□□□ -0.26
CBX1-202ENST00000393408 F5H768 121 aa13.42□□□□□ -0.26
CBX1-202ENST00000393408 GAGE4Q13068 117 aa13.42□□□□□ -0.26
CBX1-202ENST00000393408 GAGE5Q13069 117 aa13.42□□□□□ -0.26
CBX1-202ENST00000393408 SOSTDC1Q6X4U4 206 aa13.42□□□□□ -0.26
CBX1-202ENST00000393408 A0A0U1RRA0 63 aa13.41□□□□□ -0.26
CBX1-202ENST00000393408 DNAJC9-AS1A6NH13 148 aa13.41□□□□□ -0.26
CBX1-202ENST00000393408 CRLF1O75462 422 aa13.41□□□□□ -0.26
CBX1-202ENST00000393408 SNCGO76070 127 aa13.41□□□□□ -0.26
CBX1-202ENST00000393408 DEFB121Q5J5C9 76 aa13.4□□□□□ -0.26
CBX1-202ENST00000393408 PRIMA1Q86XR5 153 aa13.4□□□□□ -0.26
CBX1-202ENST00000393408 NOP10Q9NPE3 64 aaKnown RBP13.4□□□□□ -0.26
CBX1-202ENST00000393408 WNK1Q9H4A3 2382 aa13.39□□□□□ -0.27
CBX1-202ENST00000393408 COPS9Q8WXC6 57 aa13.39□□□□□ -0.27
CBX1-202ENST00000393408 EPG5Q9HCE0 2579 aa13.39□□□□□ -0.27
CBX1-202ENST00000393408 ZNF843Q8N446 348 aa13.39□□□□□ -0.27
CBX1-202ENST00000393408 GIG44P09565 113 aaPredicted RBP13.38□□□□□ -0.27
CBX1-202ENST00000393408 GAGE2BQ13066 116 aa13.38□□□□□ -0.27
CBX1-202ENST00000393408 GAGE2EQ4V326 116 aa13.38□□□□□ -0.27
CBX1-202ENST00000393408 ANAPC13Q9BS18 74 aa13.38□□□□□ -0.27
CBX1-202ENST00000393408 GAGE2DQ9UEU5 116 aa13.38□□□□□ -0.27
CBX1-202ENST00000393408 MEIG1Q5JSS6 88 aa13.38□□□□□ -0.27
CBX1-202ENST00000393408 SHISA2Q6UWI4 295 aa13.37□□□□□ -0.27
CBX1-202ENST00000393408 PLAC8L1A1L4L8 177 aa13.37□□□□□ -0.27
CBX1-202ENST00000393408 HERV-K104P63124 156 aa13.37□□□□□ -0.27
CBX1-202ENST00000393408 C15orf53Q8NAA6 179 aa13.37□□□□□ -0.27
CBX1-202ENST00000393408 TMEM243Q9BU79 118 aa13.37□□□□□ -0.27
CBX1-202ENST00000393408 ESM1Q9NQ30 184 aa13.37□□□□□ -0.27
CBX1-202ENST00000393408 ZNF469Q96JG9 3925 aaPredicted RBP13.36□□□□□ -0.27
CBX1-202ENST00000393408 COX7A2LO14548 114 aa13.36□□□□□ -0.27
CBX1-202ENST00000393408 TLN2Q9Y4G6 2542 aa13.36□□□□□ -0.27
CBX1-202ENST00000393408 UBE2L6O14933 153 aa13.35□□□□□ -0.27
CBX1-202ENST00000393408 Q6Q795 121 aa13.35□□□□□ -0.27
CBX1-202ENST00000393408 FAM240AA0A1B0GVK7 77 aa13.34□□□□□ -0.27
CBX1-202ENST00000393408 C16orf74Q96GX8 76 aa13.34□□□□□ -0.27
CBX1-202ENST00000393408 PPDPFQ9H3Y8 114 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms