RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 TRAV26-1A0A087WT03 109 aa10.64□□□□□ -0.71
MKS1-202ENST00000393119 I3L3M4 83 aa10.64□□□□□ -0.71
MKS1-202ENST00000393119 PRB2P02812 416 aaPredicted RBP10.63□□□□□ -0.71
MKS1-202ENST00000393119 FOXI1Q12951 378 aa10.63□□□□□ -0.71
MKS1-202ENST00000393119 RNASE13Q5GAN3 156 aaKnown RBP10.63□□□□□ -0.71
MKS1-202ENST00000393119 IGIPA6NJ69 53 aa10.63□□□□□ -0.71
MKS1-202ENST00000393119 RPL32P62910 135 aaKnown RBP10.63□□□□□ -0.71
MKS1-202ENST00000393119 TRAV12-1A0A0B4J245 112 aa10.62□□□□□ -0.71
MKS1-202ENST00000393119 GAGE12JA6NER3 117 aa10.62□□□□□ -0.71
MKS1-202ENST00000393119 PRSS29PA6NIE9 313 aa10.62□□□□□ -0.71
MKS1-202ENST00000393119 PLNP26678 52 aa10.62□□□□□ -0.71
MKS1-202ENST00000393119 GAGE4Q13068 117 aa10.62□□□□□ -0.71
MKS1-202ENST00000393119 GAGE5Q13069 117 aa10.62□□□□□ -0.71
MKS1-202ENST00000393119 PIK3CD-AS1Q5SR53 167 aa10.62□□□□□ -0.71
MKS1-202ENST00000393119 CYSLTR1Q9Y271 337 aa10.62□□□□□ -0.71
MKS1-202ENST00000393119 DNAH3Q8TD57 4116 aa10.62□□□□□ -0.71
MKS1-202ENST00000393119 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.62□□□□□ -0.71
MKS1-202ENST00000393119 IGKV2-29A2NJV5 120 aaPredicted RBP10.62□□□□□ -0.71
MKS1-202ENST00000393119 CRYBA4P53673 196 aa10.62□□□□□ -0.71
MKS1-202ENST00000393119 MTURNQ8N3F0 131 aa10.62□□□□□ -0.71
MKS1-202ENST00000393119 H7C1H1 209 aa10.61□□□□□ -0.71
MKS1-202ENST00000393119 HIST1H4GQ99525 98 aa10.61□□□□□ -0.71
MKS1-202ENST00000393119 OVOL2Q9BRP0 275 aa10.61□□□□□ -0.71
MKS1-202ENST00000393119 TRAV4A0A0B4J268 109 aa10.61□□□□□ -0.71
MKS1-202ENST00000393119 RHODO00212 210 aa10.61□□□□□ -0.71
MKS1-202ENST00000393119 NFE4Q86UQ8 179 aa10.61□□□□□ -0.71
MKS1-202ENST00000393119 OR11H2Q8NH07 326 aa10.61□□□□□ -0.71
MKS1-202ENST00000393119 RETNQ9HD89 108 aa10.61□□□□□ -0.71
MKS1-202ENST00000393119 MYMXA0A1B0GTQ4 84 aa10.6□□□□□ -0.71
MKS1-202ENST00000393119 WIPF1O43516 503 aa10.6□□□□□ -0.71
MKS1-202ENST00000393119 APOMO95445 188 aa10.6□□□□□ -0.71
MKS1-202ENST00000393119 SHISA2Q6UWI4 295 aa10.6□□□□□ -0.71
MKS1-202ENST00000393119 FAM104AQ969W3 186 aa10.6□□□□□ -0.71
MKS1-202ENST00000393119 GEMIN7Q9H840 131 aaKnown RBP10.6□□□□□ -0.71
MKS1-202ENST00000393119 F8VRH5 84 aa10.6□□□□□ -0.71
MKS1-202ENST00000393119 UBE2D1P51668 147 aa10.6□□□□□ -0.71
MKS1-202ENST00000393119 C20orf203Q8NBC4 194 aa10.6□□□□□ -0.71
MKS1-202ENST00000393119 EDA2RQ9HAV5 297 aa10.6□□□□□ -0.71
MKS1-202ENST00000393119 TSPAN13O95857 204 aa10.59□□□□□ -0.71
MKS1-202ENST00000393119 CHCHD7Q9BUK0 85 aa10.59□□□□□ -0.71
MKS1-202ENST00000393119 NBEAL1Q6ZS30 2694 aa10.59□□□□□ -0.71
MKS1-202ENST00000393119 K7EQD1 137 aa10.59□□□□□ -0.71
MKS1-202ENST00000393119 FHL2Q14192 279 aa10.59□□□□□ -0.71
MKS1-202ENST00000393119 FAM222AQ5U5X8 452 aa10.59□□□□□ -0.71
MKS1-202ENST00000393119 IGHV4-28A0A0C4DH34 117 aa10.58□□□□□ -0.72
MKS1-202ENST00000393119 UBE2D3P61077 147 aa10.58□□□□□ -0.72
MKS1-202ENST00000393119 UBE2D2P62837 147 aa10.58□□□□□ -0.72
MKS1-202ENST00000393119 CELA1Q9UNI1 258 aa10.58□□□□□ -0.72
MKS1-202ENST00000393119 TRGV4A0A0C4DH28 118 aa10.58□□□□□ -0.72
MKS1-202ENST00000393119 NTM-AS1Q6ZSK4 140 aa10.58□□□□□ -0.72
MKS1-202ENST00000393119 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
MKS1-202ENST00000393119 Q6ZUT4 128 aa10.57□□□□□ -0.72
MKS1-202ENST00000393119 TENM3Q9P273 2699 aa10.57□□□□□ -0.72
MKS1-202ENST00000393119 MT-ATP8P03928 68 aa10.57□□□□□ -0.72
MKS1-202ENST00000393119 XGP55808 180 aa10.57□□□□□ -0.72
MKS1-202ENST00000393119 CARD19Q96LW7 228 aa10.57□□□□□ -0.72
MKS1-202ENST00000393119 MDFIQ99750 246 aa10.57□□□□□ -0.72
MKS1-202ENST00000393119 PGPEP1Q9NXJ5 209 aa10.57□□□□□ -0.72
MKS1-202ENST00000393119 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
MKS1-202ENST00000393119 IGLV4-69A0A075B6H9 119 aa10.55□□□□□ -0.72
MKS1-202ENST00000393119 SPINK8P0C7L1 97 aa10.55□□□□□ -0.72
MKS1-202ENST00000393119 APOC4P55056 127 aa10.55□□□□□ -0.72
MKS1-202ENST00000393119 RHOHQ15669 191 aa10.55□□□□□ -0.72
MKS1-202ENST00000393119 A0A096LPF7 62 aa10.55□□□□□ -0.72
MKS1-202ENST00000393119 C11orf86A6NJI1 115 aa10.55□□□□□ -0.72
MKS1-202ENST00000393119 IGLV4-3A0A075B6K6 122 aa10.54□□□□□ -0.72
MKS1-202ENST00000393119 KIR2DL5BQ8NHK3 375 aa10.54□□□□□ -0.72
MKS1-202ENST00000393119 Q8NAQ8 132 aa10.54□□□□□ -0.72
MKS1-202ENST00000393119 ERG28Q9UKR5 140 aa10.54□□□□□ -0.72
MKS1-202ENST00000393119 MGAM2Q2M2H8 2515 aa10.54□□□□□ -0.72
MKS1-202ENST00000393119 RPL36AP83881 106 aaKnown RBP10.53□□□□□ -0.72
MKS1-202ENST00000393119 PMVKQ15126 192 aa10.53□□□□□ -0.72
MKS1-202ENST00000393119 TEN1Q86WV5 123 aa10.53□□□□□ -0.72
MKS1-202ENST00000393119 PPDPFLQ8WWR9 84 aa10.53□□□□□ -0.72
MKS1-202ENST00000393119 RPL36ALQ969Q0 106 aaKnown RBP10.53□□□□□ -0.72
MKS1-202ENST00000393119 DNAJC30Q96LL9 226 aa10.53□□□□□ -0.72
MKS1-202ENST00000393119 TIMM17AQ99595 171 aa10.53□□□□□ -0.72
MKS1-202ENST00000393119 LINC01549A6NIU2 74 aa10.52□□□□□ -0.73
MKS1-202ENST00000393119 EGFEM1PQ0D2K5 195 aa10.52□□□□□ -0.73
MKS1-202ENST00000393119 UBE2D4Q9Y2X8 147 aa10.52□□□□□ -0.73
MKS1-202ENST00000393119 A0A0J9YY99 117 aa10.52□□□□□ -0.73
MKS1-202ENST00000393119 RNF183Q96D59 192 aa10.52□□□□□ -0.73
MKS1-202ENST00000393119 PRADC1Q9BSG0 188 aa10.52□□□□□ -0.73
MKS1-202ENST00000393119 A0A0J9YXV3 536 aa10.51□□□□□ -0.73
MKS1-202ENST00000393119 A6NJY4 79 aa10.51□□□□□ -0.73
MKS1-202ENST00000393119 LINC00612Q8N6U2 182 aa10.51□□□□□ -0.73
MKS1-202ENST00000393119 TMEM141Q96I45 108 aa10.51□□□□□ -0.73
MKS1-202ENST00000393119 PLEKHB2Q96CS7 222 aa10.51□□□□□ -0.73
MKS1-202ENST00000393119 VCX2Q9H322 139 aa10.51□□□□□ -0.73
MKS1-202ENST00000393119 IGHV3-64A0A075B6Q5 118 aa10.5□□□□□ -0.73
MKS1-202ENST00000393119 TRBV6-4A0A1B0GX49 114 aa10.5□□□□□ -0.73
MKS1-202ENST00000393119 SMIM9A6NGZ8 99 aa10.5□□□□□ -0.73
MKS1-202ENST00000393119 HTN3P15516 51 aa10.5□□□□□ -0.73
MKS1-202ENST00000393119 TRBV10-1A0A0K0K1A3 114 aa10.49□□□□□ -0.73
MKS1-202ENST00000393119 M0QXV9 152 aa10.48□□□□□ -0.73
MKS1-202ENST00000393119 GYPEP15421 78 aa10.48□□□□□ -0.73
MKS1-202ENST00000393119 TMEM170BQ5T4T1 132 aa10.48□□□□□ -0.73
MKS1-202ENST00000393119 ZNF815PA8K554 130 aa10.48□□□□□ -0.73
MKS1-202ENST00000393119 TCL1BO95988 128 aa10.48□□□□□ -0.73
MKS1-202ENST00000393119 PSMB2P49721 201 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms