RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 TRIAP1O43715 76 aa13.36□□□□□ -0.27
TRAF3-203ENST00000392745 HIVEP1P15822 2718 aa13.36□□□□□ -0.27
TRAF3-203ENST00000392745 INAFM1C9JVW0 142 aa13.36□□□□□ -0.27
TRAF3-203ENST00000392745 IGHV3-30-3P0DP02 117 aa13.35□□□□□ -0.27
TRAF3-203ENST00000392745 TRAV8-3A0A0A6YYJ7 113 aa13.35□□□□□ -0.27
TRAF3-203ENST00000392745 I3L3M4 83 aa13.35□□□□□ -0.27
TRAF3-203ENST00000392745 SNCGO76070 127 aa13.35□□□□□ -0.27
TRAF3-203ENST00000392745 NDUFA7O95182 113 aa13.35□□□□□ -0.27
TRAF3-203ENST00000392745 PROK1P58294 105 aa13.35□□□□□ -0.27
TRAF3-203ENST00000392745 LITAFQ99732 161 aa13.35□□□□□ -0.27
TRAF3-203ENST00000392745 GAGE2BQ13066 116 aa13.34□□□□□ -0.27
TRAF3-203ENST00000392745 GAGE2EQ4V326 116 aa13.34□□□□□ -0.27
TRAF3-203ENST00000392745 GAGE2DQ9UEU5 116 aa13.34□□□□□ -0.27
TRAF3-203ENST00000392745 NSD1Q96L73 2696 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-203ENST00000392745 PRSS2P07478 247 aa13.33□□□□□ -0.28
TRAF3-203ENST00000392745 CEMP1Q6PRD7 247 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-203ENST00000392745 FAM104AQ969W3 186 aa13.33□□□□□ -0.28
TRAF3-203ENST00000392745 TRBV30A0A0K0K1B3 111 aa13.33□□□□□ -0.28
TRAF3-203ENST00000392745 B5MCH6 92 aa13.33□□□□□ -0.28
TRAF3-203ENST00000392745 GAGE5Q13069 117 aa13.33□□□□□ -0.28
TRAF3-203ENST00000392745 GAGE6Q13070 117 aa13.33□□□□□ -0.28
TRAF3-203ENST00000392745 RNASE13Q5GAN3 156 aaKnown RBP13.33□□□□□ -0.28
TRAF3-203ENST00000392745 ADAMTSL4-AS1Q5T5F5 129 aa13.33□□□□□ -0.28
TRAF3-203ENST00000392745 IGHV1OR15-1A0A075B7D0 117 aa13.32□□□□□ -0.28
TRAF3-203ENST00000392745 TRBV10-2A0A0K0K1G8 114 aa13.32□□□□□ -0.28
TRAF3-203ENST00000392745 H3BMM0 161 aa13.32□□□□□ -0.28
TRAF3-203ENST00000392745 TIMM21Q9BVV7 248 aa13.32□□□□□ -0.28
TRAF3-203ENST00000392745 MAP6D1Q9H9H5 199 aa13.32□□□□□ -0.28
TRAF3-203ENST00000392745 FN1P02751 2386 aaKnown RBP13.32□□□□□ -0.28
TRAF3-203ENST00000392745 RBMY1BA6NDE4 496 aaKnown RBP13.31□□□□□ -0.28
TRAF3-203ENST00000392745 RBMY1EA6NEQ0 496 aaKnown RBP13.31□□□□□ -0.28
TRAF3-203ENST00000392745 RBMY1DP0C7P1 496 aaKnown RBP13.31□□□□□ -0.28
TRAF3-203ENST00000392745 NDUFV3P56181 108 aaKnown RBP13.31□□□□□ -0.28
TRAF3-203ENST00000392745 NPC2P61916 151 aa13.31□□□□□ -0.28
TRAF3-203ENST00000392745 IGHV3-73A0A0B4J1V6 119 aa13.31□□□□□ -0.28
TRAF3-203ENST00000392745 TRAV8-4A0A0B4J246 113 aa13.3□□□□□ -0.28
TRAF3-203ENST00000392745 A8MZ25 164 aa13.3□□□□□ -0.28
TRAF3-203ENST00000392745 RPL13AP40429 203 aaKnown RBP13.3□□□□□ -0.28
TRAF3-203ENST00000392745 KRTAP10-3P60369 221 aa13.3□□□□□ -0.28
TRAF3-203ENST00000392745 A8MTW9 85 aa13.3□□□□□ -0.28
TRAF3-203ENST00000392745 RBMY1A1P0DJD3 496 aaKnown RBP13.3□□□□□ -0.28
TRAF3-203ENST00000392745 RBMY1CP0DJD4 496 aa13.3□□□□□ -0.28
TRAF3-203ENST00000392745 RBMY1FQ15415 496 aaKnown RBP13.3□□□□□ -0.28
TRAF3-203ENST00000392745 UBE2WQ96B02 151 aa13.29□□□□□ -0.28
TRAF3-203ENST00000392745 ICOSQ9Y6W8 199 aa13.29□□□□□ -0.28
TRAF3-203ENST00000392745 LINC01600Q96MT4 127 aa13.29□□□□□ -0.28
TRAF3-203ENST00000392745 H7C423 109 aa13.28□□□□□ -0.28
TRAF3-203ENST00000392745 MRPS36P82909 103 aaKnown RBP13.28□□□□□ -0.28
TRAF3-203ENST00000392745 C2orf82Q6UX34 121 aa13.28□□□□□ -0.28
TRAF3-203ENST00000392745 C15orf53Q8NAA6 179 aa13.28□□□□□ -0.28
TRAF3-203ENST00000392745 C2CD3Q4AC94 2353 aa13.28□□□□□ -0.28
TRAF3-203ENST00000392745 NDUFA12Q9UI09 145 aa13.28□□□□□ -0.28
TRAF3-203ENST00000392745 TRAV25A0A0B4J276 109 aa13.27□□□□□ -0.29
TRAF3-203ENST00000392745 ODF3L2Q3SX64 289 aa13.27□□□□□ -0.29
TRAF3-203ENST00000392745 CLEC2BQ92478 149 aa13.27□□□□□ -0.29
TRAF3-203ENST00000392745 CCDC179H3BU77 68 aa13.27□□□□□ -0.29
TRAF3-203ENST00000392745 TTC32Q5I0X7 151 aa13.27□□□□□ -0.29
TRAF3-203ENST00000392745 Q9UF83 564 aa13.27□□□□□ -0.29
TRAF3-203ENST00000392745 IGHV1-58A0A0C4DH39 117 aa13.26□□□□□ -0.29
TRAF3-203ENST00000392745 HTN1P15515 57 aa13.26□□□□□ -0.29
TRAF3-203ENST00000392745 IFITM1P13164 125 aa13.25□□□□□ -0.29
TRAF3-203ENST00000392745 PYGO1Q9Y3Y4 419 aa13.25□□□□□ -0.29
TRAF3-203ENST00000392745 SPANXDQ9BXN6 97 aa13.25□□□□□ -0.29
TRAF3-203ENST00000392745 SPANXCQ9NY87 97 aa13.25□□□□□ -0.29
TRAF3-203ENST00000392745 PRM2P04554 102 aa13.24□□□□□ -0.29
TRAF3-203ENST00000392745 MIAQ16674 131 aa13.24□□□□□ -0.29
TRAF3-203ENST00000392745 VSIG2Q96IQ7 327 aa13.23□□□□□ -0.29
TRAF3-203ENST00000392745 Q6Q795 121 aa13.22□□□□□ -0.29
TRAF3-203ENST00000392745 DAND5Q8N907 189 aa13.22□□□□□ -0.29
TRAF3-203ENST00000392745 GAGE12JA6NER3 117 aa13.22□□□□□ -0.29
TRAF3-203ENST00000392745 GAGE7O76087 117 aa13.22□□□□□ -0.29
TRAF3-203ENST00000392745 GAGE12FP0CL80 117 aa13.22□□□□□ -0.29
TRAF3-203ENST00000392745 GAGE12GP0CL81 117 aa13.22□□□□□ -0.29
TRAF3-203ENST00000392745 GAGE12IP0CL82 117 aa13.22□□□□□ -0.29
TRAF3-203ENST00000392745 GAGE4Q13068 117 aa13.22□□□□□ -0.29
TRAF3-203ENST00000392745 FLNBO75369 2602 aaKnown RBP13.22□□□□□ -0.29
TRAF3-203ENST00000392745 TRGV11A0A075B6L2 103 aa13.21□□□□□ -0.29
TRAF3-203ENST00000392745 COX6CP09669 75 aa13.21□□□□□ -0.29
TRAF3-203ENST00000392745 JMJD1CQ15652 2540 aa13.2□□□□□ -0.3
TRAF3-203ENST00000392745 NACAE9PAV3 2078 aa13.2□□□□□ -0.3
TRAF3-203ENST00000392745 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-203ENST00000392745 IGKV2-29A2NJV5 120 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-203ENST00000392745 H3BT86 120 aa13.2□□□□□ -0.3
TRAF3-203ENST00000392745 IGLV1-51P01701 117 aa13.2□□□□□ -0.3
TRAF3-203ENST00000392745 Q6ZSN1 163 aa13.2□□□□□ -0.3
TRAF3-203ENST00000392745 TNFRSF18Q9Y5U5 241 aa13.2□□□□□ -0.3
TRAF3-203ENST00000392745 TINCRA0A1B0GVN0 87 aa13.19□□□□□ -0.3
TRAF3-203ENST00000392745 LST1O00453 97 aa13.19□□□□□ -0.3
TRAF3-203ENST00000392745 CHCHD7Q9BUK0 85 aa13.19□□□□□ -0.3
TRAF3-203ENST00000392745 UBE2D4Q9Y2X8 147 aa13.19□□□□□ -0.3
TRAF3-203ENST00000392745 STHQ8IWL8 128 aa13.17□□□□□ -0.3
TRAF3-203ENST00000392745 EDA2RQ9HAV5 297 aa13.17□□□□□ -0.3
TRAF3-203ENST00000392745 XCL2Q9UBD3 114 aa13.17□□□□□ -0.3
TRAF3-203ENST00000392745 IGHV3-38A0A0C4DH36 116 aa13.16□□□□□ -0.3
TRAF3-203ENST00000392745 TENM1Q9UKZ4 2725 aa13.16□□□□□ -0.3
TRAF3-203ENST00000392745 LINC00467Q9BRT7 94 aa13.16□□□□□ -0.3
TRAF3-203ENST00000392745 VWFP04275 2813 aa13.16□□□□□ -0.3
TRAF3-203ENST00000392745 LINC01587Q99440 93 aa13.15□□□□□ -0.3
TRAF3-203ENST00000392745 WFDC10AQ9H1F0 79 aa13.15□□□□□ -0.3
TRAF3-203ENST00000392745 CDKN2A-AS1Q9UH64 79 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms