RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 RBX1P62877 108 aa7.55□□□□□ -1.2
PKP4-201ENST00000389757 LELP1Q5T871 98 aa7.55□□□□□ -1.2
PKP4-201ENST00000389757 CDKN2A-AS1Q9UH64 79 aa7.55□□□□□ -1.2
PKP4-201ENST00000389757 K7EP13 123 aa7.55□□□□□ -1.2
PKP4-201ENST00000389757 NDUFS5O43920 106 aa7.55□□□□□ -1.2
PKP4-201ENST00000389757 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.54□□□□□ -1.2
PKP4-201ENST00000389757 EDN2P20800 178 aa7.54□□□□□ -1.2
PKP4-201ENST00000389757 C9orf85Q96MD7 179 aa7.54□□□□□ -1.2
PKP4-201ENST00000389757 TRBV6-5A0A0K0K1A5 114 aa7.54□□□□□ -1.2
PKP4-201ENST00000389757 USP9YO00507 2555 aaPredicted RBP7.54□□□□□ -1.2
PKP4-201ENST00000389757 C11orf21Q9P2W6 132 aa7.54□□□□□ -1.2
PKP4-201ENST00000389757 M0R2N4 97 aa7.54□□□□□ -1.2
PKP4-201ENST00000389757 SPATA12Q7Z6I5 190 aa7.54□□□□□ -1.2
PKP4-201ENST00000389757 TRBV27A0A0K0K1C4 114 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 PRM2P04554 102 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 LECT2O14960 151 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 COX7BP24311 80 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 RNF185Q96GF1 192 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 CLUHP3Q96NS8 147 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 RAI1Q7Z5J4 1906 aaPredicted RBP7.53□□□□□ -1.2
PKP4-201ENST00000389757 SYCNQ0VAF6 134 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 COL4A2P08572 1712 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 ADAMTS20P59510 1910 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 FXYD2P54710 66 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 CDPF1Q6NVV7 123 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 HCFC1P51610 2035 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 EML5Q05BV3 1969 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 TANC2Q9HCD6 1990 aa7.53□□□□□ -1.2
PKP4-201ENST00000389757 NDUFB1O75438 58 aa7.52□□□□□ -1.2
PKP4-201ENST00000389757 MRGPRG-AS1Q2M3A8 158 aa7.52□□□□□ -1.2
PKP4-201ENST00000389757 LOC100131303A0A0U1RQF7 123 aa7.52□□□□□ -1.21
PKP4-201ENST00000389757 C9orf153Q5TBE3 101 aa7.52□□□□□ -1.21
PKP4-201ENST00000389757 LRRK2Q5S007 2527 aa7.52□□□□□ -1.21
PKP4-201ENST00000389757 HIGD2AQ9BW72 106 aa7.52□□□□□ -1.21
PKP4-201ENST00000389757 CENPFP49454 3210 aa7.52□□□□□ -1.21
PKP4-201ENST00000389757 A0A087WZ39 114 aa7.52□□□□□ -1.21
PKP4-201ENST00000389757 TRACP01848 142 aa7.52□□□□□ -1.21
PKP4-201ENST00000389757 CITED1Q99966 193 aa7.52□□□□□ -1.21
PKP4-201ENST00000389757 SPANXCQ9NY87 97 aa7.52□□□□□ -1.21
PKP4-201ENST00000389757 PIK3CD-AS1Q5SR53 167 aa7.52□□□□□ -1.21
PKP4-201ENST00000389757 A0A0J9YXY3 114 aa7.51□□□□□ -1.21
PKP4-201ENST00000389757 NUPR2A6NF83 97 aa7.51□□□□□ -1.21
PKP4-201ENST00000389757 ZNF22P17026 224 aaPredicted RBP7.51□□□□□ -1.21
PKP4-201ENST00000389757 ANKRD29Q8N6D5 301 aa7.51□□□□□ -1.21
PKP4-201ENST00000389757 RETNQ9HD89 108 aa7.51□□□□□ -1.21
PKP4-201ENST00000389757 PYGO1Q9Y3Y4 419 aa7.51□□□□□ -1.21
PKP4-201ENST00000389757 U3KQK5 164 aa7.51□□□□□ -1.21
PKP4-201ENST00000389757 CPAMD8Q8IZJ3 1885 aa7.5□□□□□ -1.21
PKP4-201ENST00000389757 ATG2AQ2TAZ0 1938 aa7.5□□□□□ -1.21
PKP4-201ENST00000389757 LINC01620Q4KN68 170 aa7.5□□□□□ -1.21
PKP4-201ENST00000389757 CD164L2Q6UWJ8 174 aa7.5□□□□□ -1.21
PKP4-201ENST00000389757 DOPEY1Q5JWR5 2465 aa7.5□□□□□ -1.21
PKP4-201ENST00000389757 IBA57-AS1B1ANH7 110 aa7.5□□□□□ -1.21
PKP4-201ENST00000389757 MRPS12O15235 138 aaKnown RBP7.5□□□□□ -1.21
PKP4-201ENST00000389757 TNRC6BQ9UPQ9 1833 aaKnown RBP7.5□□□□□ -1.21
PKP4-201ENST00000389757 TSHBP01222 138 aa7.5□□□□□ -1.21
PKP4-201ENST00000389757 FN1P02751 2386 aaKnown RBP7.49□□□□□ -1.21
PKP4-201ENST00000389757 C7orf33Q8WU49 177 aa7.49□□□□□ -1.21
PKP4-201ENST00000389757 JMJD7-PLA2G4BH0Y9G9 81 aa7.49□□□□□ -1.21
PKP4-201ENST00000389757 TMEM223A0PJW6 202 aa7.49□□□□□ -1.21
PKP4-201ENST00000389757 NREPQ16612 68 aa7.49□□□□□ -1.21
PKP4-201ENST00000389757 FAM19A1Q7Z5A9 133 aa7.49□□□□□ -1.21
PKP4-201ENST00000389757 SPANXDQ9BXN6 97 aa7.49□□□□□ -1.21
PKP4-201ENST00000389757 LRCOL1A6NCL2 159 aa7.48□□□□□ -1.21
PKP4-201ENST00000389757 FAM19A5Q7Z5A7 132 aaPredicted RBP7.48□□□□□ -1.21
PKP4-201ENST00000389757 XAGE1AQ9HD64 81 aa7.48□□□□□ -1.21
PKP4-201ENST00000389757 UBE2D3P61077 147 aa7.48□□□□□ -1.21
PKP4-201ENST00000389757 UBE2D2P62837 147 aa7.48□□□□□ -1.21
PKP4-201ENST00000389757 ACYP1P07311 99 aa7.48□□□□□ -1.21
PKP4-201ENST00000389757 NRACQ8N912 160 aa7.48□□□□□ -1.21
PKP4-201ENST00000389757 DSCAML1Q8TD84 2053 aa7.47□□□□□ -1.21
PKP4-201ENST00000389757 CLEC2BQ92478 149 aa7.47□□□□□ -1.21
PKP4-201ENST00000389757 GOLGB1Q14789 3259 aaKnown RBP7.47□□□□□ -1.21
PKP4-201ENST00000389757 TMEM256-PLSCR3K7ERE1 68 aa7.47□□□□□ -1.21
PKP4-201ENST00000389757 LINC00959A0A1B0GUT2 108 aa7.46□□□□□ -1.21
PKP4-201ENST00000389757 POLR2KP53803 58 aaKnown RBP7.46□□□□□ -1.21
PKP4-201ENST00000389757 NPSP0C0P6 89 aa7.46□□□□□ -1.21
PKP4-201ENST00000389757 RBM3P98179 157 aaKnown RBP7.46□□□□□ -1.21
PKP4-201ENST00000389757 C1orf158Q8N1D5 194 aa7.46□□□□□ -1.22
PKP4-201ENST00000389757 UBE2D4Q9Y2X8 147 aa7.46□□□□□ -1.22
PKP4-201ENST00000389757 SETD2Q9BYW2 2564 aaPredicted RBP7.46□□□□□ -1.22
PKP4-201ENST00000389757 IGLV4-69A0A075B6H9 119 aa7.45□□□□□ -1.22
PKP4-201ENST00000389757 PKD1L2Q7Z442 2459 aa7.45□□□□□ -1.22
PKP4-201ENST00000389757 MRPS36P82909 103 aaKnown RBP7.45□□□□□ -1.22
PKP4-201ENST00000389757 Q8N2B8 174 aa7.45□□□□□ -1.22
PKP4-201ENST00000389757 EPG5Q9HCE0 2579 aa7.45□□□□□ -1.22
PKP4-201ENST00000389757 EXPH5Q8NEV8 1989 aa7.45□□□□□ -1.22
PKP4-201ENST00000389757 CNFNQ9BYD5 112 aa7.45□□□□□ -1.22
PKP4-201ENST00000389757 Q6ZTC4 211 aa7.44□□□□□ -1.22
PKP4-201ENST00000389757 SPANXB1Q9NS25 103 aaPredicted RBP7.44□□□□□ -1.22
PKP4-201ENST00000389757 LINC00308Q8TCZ7 52 aa7.44□□□□□ -1.22
PKP4-201ENST00000389757 LINC00526Q96FQ7 95 aa7.44□□□□□ -1.22
PKP4-201ENST00000389757 A0A0B4J2C4 111 aa7.43□□□□□ -1.22
PKP4-201ENST00000389757 TRBV10-2A0A0K0K1G8 114 aa7.43□□□□□ -1.22
PKP4-201ENST00000389757 H3BT86 120 aa7.43□□□□□ -1.22
PKP4-201ENST00000389757 PDE6GP18545 87 aa7.43□□□□□ -1.22
PKP4-201ENST00000389757 CHCHD7Q9BUK0 85 aa7.43□□□□□ -1.22
PKP4-201ENST00000389757 LOC107984640A0A0U1RRK4 108 aa7.43□□□□□ -1.22
PKP4-201ENST00000389757 A0A096LNI7 61 aa7.42□□□□□ -1.22
PKP4-201ENST00000389757 TEN1Q86WV5 123 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms