RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 TMEM101Q96IK0 257 aa12.63□□□□□ -0.39
SMN2-202ENST00000380742 CSDC2Q9Y534 153 aaKnown RBP12.63□□□□□ -0.39
SMN2-202ENST00000380742 A0A096LNJ9 63 aa12.62□□□□□ -0.39
SMN2-202ENST00000380742 C1orf196B1AJZ1 125 aa12.62□□□□□ -0.39
SMN2-202ENST00000380742 SMAGPQ0VAQ4 97 aa12.62□□□□□ -0.39
SMN2-202ENST00000380742 DGAT2L7PQ6IED9 249 aa12.62□□□□□ -0.39
SMN2-202ENST00000380742 CLPSL2Q6UWE3 100 aa12.62□□□□□ -0.39
SMN2-202ENST00000380742 UBE2WQ96B02 151 aa12.62□□□□□ -0.39
SMN2-202ENST00000380742 TOMM6Q96B49 74 aa12.62□□□□□ -0.39
SMN2-202ENST00000380742 CHCHD1Q96BP2 118 aaKnown RBP12.62□□□□□ -0.39
SMN2-202ENST00000380742 CDC42SE2Q9NRR3 84 aa12.62□□□□□ -0.39
SMN2-202ENST00000380742 SPANXA1Q9NS26 97 aa12.62□□□□□ -0.39
SMN2-202ENST00000380742 PRR34Q9NV39 138 aa12.62□□□□□ -0.39
SMN2-202ENST00000380742 SERF1AO75920 110 aa12.61□□□□□ -0.39
SMN2-202ENST00000380742 G0S2P27469 103 aa12.61□□□□□ -0.39
SMN2-202ENST00000380742 PMCHL1Q16048 86 aa12.61□□□□□ -0.39
SMN2-202ENST00000380742 ZNF664Q8N3J9 261 aa12.61□□□□□ -0.39
SMN2-202ENST00000380742 OPRPNQ99935 248 aaPredicted RBP12.61□□□□□ -0.39
SMN2-202ENST00000380742 Q9HAA7 133 aa12.61□□□□□ -0.39
SMN2-202ENST00000380742 PYGO1Q9Y3Y4 419 aa12.61□□□□□ -0.39
SMN2-202ENST00000380742 REG3AQ06141 175 aa12.6□□□□□ -0.39
SMN2-202ENST00000380742 Q6ZUT4 128 aa12.6□□□□□ -0.39
SMN2-202ENST00000380742 DNAH17Q9UFH2 4485 aa12.6□□□□□ -0.39
SMN2-202ENST00000380742 IGIPA6NJ69 53 aa12.59□□□□□ -0.39
SMN2-202ENST00000380742 NUPR1O60356 82 aa12.59□□□□□ -0.39
SMN2-202ENST00000380742 RNASE13Q5GAN3 156 aaKnown RBP12.59□□□□□ -0.39
SMN2-202ENST00000380742 C6orf223Q8N319 242 aa12.59□□□□□ -0.39
SMN2-202ENST00000380742 TRAV8-3A0A0A6YYJ7 113 aa12.58□□□□□ -0.4
SMN2-202ENST00000380742 CRPP02741 224 aa12.58□□□□□ -0.4
SMN2-202ENST00000380742 C1orf134Q5TEV5 83 aa12.58□□□□□ -0.4
SMN2-202ENST00000380742 IGLV4-3A0A075B6K6 122 aa12.57□□□□□ -0.4
SMN2-202ENST00000380742 HBDP02042 147 aa12.57□□□□□ -0.4
SMN2-202ENST00000380742 MRPS36P82909 103 aaKnown RBP12.57□□□□□ -0.4
SMN2-202ENST00000380742 IGKV3OR2-268A0A0C4DH90 116 aa12.56□□□□□ -0.4
SMN2-202ENST00000380742 HSBP1O75506 76 aa12.56□□□□□ -0.4
SMN2-202ENST00000380742 MIAQ16674 131 aa12.56□□□□□ -0.4
SMN2-202ENST00000380742 Q6ZRN7 208 aaPredicted RBP12.56□□□□□ -0.4
SMN2-202ENST00000380742 ERASQ7Z444 233 aa12.56□□□□□ -0.4
SMN2-202ENST00000380742 SCGB3A1Q96QR1 104 aa12.56□□□□□ -0.4
SMN2-202ENST00000380742 LINC01549A6NIU2 74 aa12.56□□□□□ -0.4
SMN2-202ENST00000380742 FAM19A2Q8N3H0 131 aa12.56□□□□□ -0.4
SMN2-202ENST00000380742 TIMM17AQ99595 171 aa12.56□□□□□ -0.4
SMN2-202ENST00000380742 RTL8CO15255 209 aa12.55□□□□□ -0.4
SMN2-202ENST00000380742 PDZD11Q5EBL8 140 aa12.55□□□□□ -0.4
SMN2-202ENST00000380742 NFE4Q86UQ8 179 aa12.55□□□□□ -0.4
SMN2-202ENST00000380742 TMEM141Q96I45 108 aa12.55□□□□□ -0.4
SMN2-202ENST00000380742 IGLV10-54A0A075B6I4 117 aa12.54□□□□□ -0.4
SMN2-202ENST00000380742 IGKV2D-24A0A075B6R9 120 aa12.54□□□□□ -0.4
SMN2-202ENST00000380742 NPSP0C0P6 89 aa12.54□□□□□ -0.4
SMN2-202ENST00000380742 NDUFA6P56556 154 aa12.54□□□□□ -0.4
SMN2-202ENST00000380742 ZC2HC1BQ5TFG8 222 aa12.54□□□□□ -0.4
SMN2-202ENST00000380742 LINC00959A0A1B0GUT2 108 aa12.53□□□□□ -0.4
SMN2-202ENST00000380742 COA6Q5JTJ3 125 aaKnown RBP12.53□□□□□ -0.4
SMN2-202ENST00000380742 LINC00173Q6ZV60 143 aa12.53□□□□□ -0.4
SMN2-202ENST00000380742 FAT2Q9NYQ8 4349 aa12.52□□□□□ -0.41
SMN2-202ENST00000380742 TRAV8-4A0A0B4J246 113 aa12.52□□□□□ -0.41
SMN2-202ENST00000380742 KRTAP26-1Q6PEX3 210 aa12.52□□□□□ -0.41
SMN2-202ENST00000380742 RMI2Q96E14 147 aa12.52□□□□□ -0.41
SMN2-202ENST00000380742 AMELXQ99217 191 aa12.52□□□□□ -0.41
SMN2-202ENST00000380742 C1orf43Q9BWL3 253 aa12.52□□□□□ -0.41
SMN2-202ENST00000380742 TRAV13-1A0A0B4J241 112 aa12.5□□□□□ -0.41
SMN2-202ENST00000380742 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.5□□□□□ -0.41
SMN2-202ENST00000380742 Q6ZN92 141 aa12.5□□□□□ -0.41
SMN2-202ENST00000380742 TEX43Q6ZNM6 134 aa12.5□□□□□ -0.41
SMN2-202ENST00000380742 MAPKAPK5-AS1Q8N8E1 139 aa12.5□□□□□ -0.41
SMN2-202ENST00000380742 TM2D2Q9BX73 214 aa12.5□□□□□ -0.41
SMN2-202ENST00000380742 VCX2Q9H322 139 aa12.5□□□□□ -0.41
SMN2-202ENST00000380742 IFITM10A6NMD0 228 aa12.49□□□□□ -0.41
SMN2-202ENST00000380742 SS18Q15532 418 aa12.49□□□□□ -0.41
SMN2-202ENST00000380742 BAALCQ8WXS3 180 aa12.49□□□□□ -0.41
SMN2-202ENST00000380742 CHCHD10Q8WYQ3 142 aaPredicted RBP12.49□□□□□ -0.41
SMN2-202ENST00000380742 CCL25O15444 150 aa12.48□□□□□ -0.41
SMN2-202ENST00000380742 ATP5LO75964 103 aa12.48□□□□□ -0.41
SMN2-202ENST00000380742 PAPPA-AS1Q5QFB9 102 aa12.48□□□□□ -0.41
SMN2-202ENST00000380742 COX11Q9Y6N1 276 aa12.48□□□□□ -0.41
SMN2-202ENST00000380742 PSCAO43653 123 aa12.47□□□□□ -0.41
SMN2-202ENST00000380742 GAGE12HA6NDE8 117 aa12.46□□□□□ -0.41
SMN2-202ENST00000380742 PRSS29PA6NIE9 313 aa12.46□□□□□ -0.41
SMN2-202ENST00000380742 XCL1P47992 114 aa12.46□□□□□ -0.41
SMN2-202ENST00000380742 UBE2D1P51668 147 aa12.46□□□□□ -0.41
SMN2-202ENST00000380742 C2orf88Q9BSF0 95 aa12.46□□□□□ -0.41
SMN2-202ENST00000380742 LEPROTL1O95214 131 aa12.45□□□□□ -0.42
SMN2-202ENST00000380742 FABP4P15090 132 aa12.45□□□□□ -0.42
SMN2-202ENST00000380742 TNP2Q05952 138 aa12.45□□□□□ -0.42
SMN2-202ENST00000380742 PMVKQ15126 192 aa12.45□□□□□ -0.42
SMN2-202ENST00000380742 IFI27L1Q96BM0 104 aa12.45□□□□□ -0.42
SMN2-202ENST00000380742 CST9LQ9H4G1 147 aa12.45□□□□□ -0.42
SMN2-202ENST00000380742 DNAH11Q96DT5 4516 aa12.45□□□□□ -0.42
SMN2-202ENST00000380742 FOXI1Q12951 378 aa12.44□□□□□ -0.42
SMN2-202ENST00000380742 PKD1P98161 4303 aa12.44□□□□□ -0.42
SMN2-202ENST00000380742 LRCOL1A6NCL2 159 aa12.43□□□□□ -0.42
SMN2-202ENST00000380742 LINC00242Q5T6M2 205 aa12.43□□□□□ -0.42
SMN2-202ENST00000380742 CD164L2Q6UWJ8 174 aa12.43□□□□□ -0.42
SMN2-202ENST00000380742 PRSS1P07477 247 aa12.42□□□□□ -0.42
SMN2-202ENST00000380742 COX6A2Q02221 97 aa12.42□□□□□ -0.42
SMN2-202ENST00000380742 WFDC2Q14508 124 aa12.42□□□□□ -0.42
SMN2-202ENST00000380742 LINC00336Q6ZUF6 198 aa12.42□□□□□ -0.42
SMN2-202ENST00000380742 FAM19A3Q7Z5A8 133 aa12.42□□□□□ -0.42
SMN2-202ENST00000380742 HSPB8Q9UJY1 196 aa12.42□□□□□ -0.42
SMN2-202ENST00000380742 A0A0J9YXV3 536 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms