RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 PRO3102Q9H379 93 aa11.92□□□□□ -0.5
COL2A1-202ENST00000380518 TRBV30A0A0K0K1B3 111 aa11.92□□□□□ -0.5
COL2A1-202ENST00000380518 MIFP14174 115 aa11.92□□□□□ -0.5
COL2A1-202ENST00000380518 DEFB131BA0A096LNP1 70 aa11.92□□□□□ -0.5
COL2A1-202ENST00000380518 PIK3CD-AS1Q5SR53 167 aa11.92□□□□□ -0.5
COL2A1-202ENST00000380518 TRIAP1O43715 76 aa11.91□□□□□ -0.5
COL2A1-202ENST00000380518 PSMG3-AS1Q96PY0 264 aa11.91□□□□□ -0.5
COL2A1-202ENST00000380518 CRYGDP07320 174 aa11.91□□□□□ -0.5
COL2A1-202ENST00000380518 Q8N976 141 aa11.9□□□□□ -0.5
COL2A1-202ENST00000380518 RNASE3P12724 160 aaKnown RBP11.9□□□□□ -0.5
COL2A1-202ENST00000380518 PROK1P58294 105 aa11.9□□□□□ -0.5
COL2A1-202ENST00000380518 NRACQ8N912 160 aa11.9□□□□□ -0.5
COL2A1-202ENST00000380518 MT-ATP8P03928 68 aa11.9□□□□□ -0.51
COL2A1-202ENST00000380518 KIAA1549LQ6ZVL6 1849 aa11.89□□□□□ -0.51
COL2A1-202ENST00000380518 NDUFV3P56181 108 aaKnown RBP11.89□□□□□ -0.51
COL2A1-202ENST00000380518 ATP5EP2Q5VTU8 51 aa11.89□□□□□ -0.51
COL2A1-202ENST00000380518 HILS1P60008 231 aa11.88□□□□□ -0.51
COL2A1-202ENST00000380518 KLLNB2CW77 178 aa11.88□□□□□ -0.51
COL2A1-202ENST00000380518 TIMM17BO60830 172 aa11.88□□□□□ -0.51
COL2A1-202ENST00000380518 XAGE1AQ9HD64 81 aa11.88□□□□□ -0.51
COL2A1-202ENST00000380518 C11orf21Q9P2W6 132 aa11.88□□□□□ -0.51
COL2A1-202ENST00000380518 TSHBP01222 138 aa11.87□□□□□ -0.51
COL2A1-202ENST00000380518 LINC00482Q8N8I6 264 aa11.87□□□□□ -0.51
COL2A1-202ENST00000380518 RBX1P62877 108 aa11.87□□□□□ -0.51
COL2A1-202ENST00000380518 SLPIP03973 132 aa11.87□□□□□ -0.51
COL2A1-202ENST00000380518 SDIM1Q6ZPB5 146 aa11.87□□□□□ -0.51
COL2A1-202ENST00000380518 ZNF702PQ9H963 129 aa11.87□□□□□ -0.51
COL2A1-202ENST00000380518 TLN1Q9Y490 2541 aaKnown RBP11.87□□□□□ -0.51
COL2A1-202ENST00000380518 INAFM1C9JVW0 142 aa11.87□□□□□ -0.51
COL2A1-202ENST00000380518 RNF183Q96D59 192 aa11.87□□□□□ -0.51
COL2A1-202ENST00000380518 C20orf197Q8N268 126 aa11.86□□□□□ -0.51
COL2A1-202ENST00000380518 UQCRQO14949 82 aa11.86□□□□□ -0.51
COL2A1-202ENST00000380518 C6orf99Q4VX62 202 aa11.86□□□□□ -0.51
COL2A1-202ENST00000380518 PRR9Q5T870 116 aa11.86□□□□□ -0.51
COL2A1-202ENST00000380518 KIAA1549Q9HCM3 1950 aa11.86□□□□□ -0.51
COL2A1-202ENST00000380518 POLR2KP53803 58 aaKnown RBP11.86□□□□□ -0.51
COL2A1-202ENST00000380518 SPATA25Q9BR10 227 aa11.86□□□□□ -0.51
COL2A1-202ENST00000380518 FAM19A1Q7Z5A9 133 aa11.85□□□□□ -0.51
COL2A1-202ENST00000380518 SYCNQ0VAF6 134 aa11.85□□□□□ -0.51
COL2A1-202ENST00000380518 BBC3Q96PG8 261 aaPredicted RBP11.84□□□□□ -0.51
COL2A1-202ENST00000380518 C9orf85Q96MD7 179 aa11.84□□□□□ -0.51
COL2A1-202ENST00000380518 IGLV1-40P01703 118 aa11.83□□□□□ -0.52
COL2A1-202ENST00000380518 C2orf91Q6ZV80 131 aa11.83□□□□□ -0.52
COL2A1-202ENST00000380518 SHISA2Q6UWI4 295 aa11.83□□□□□ -0.52
COL2A1-202ENST00000380518 IGKV4-1P06312 121 aa11.83□□□□□ -0.52
COL2A1-202ENST00000380518 CD164L2Q6UWJ8 174 aa11.83□□□□□ -0.52
COL2A1-202ENST00000380518 A0A096LNI7 61 aa11.83□□□□□ -0.52
COL2A1-202ENST00000380518 A8MZ25 164 aa11.82□□□□□ -0.52
COL2A1-202ENST00000380518 A0A087WZ39 114 aa11.82□□□□□ -0.52
COL2A1-202ENST00000380518 KIR2DL5BQ8NHK3 375 aa11.82□□□□□ -0.52
COL2A1-202ENST00000380518 LINC01006Q8NI28 216 aa11.82□□□□□ -0.52
COL2A1-202ENST00000380518 CNFNQ9BYD5 112 aa11.82□□□□□ -0.52
COL2A1-202ENST00000380518 MRPS36P82909 103 aaKnown RBP11.82□□□□□ -0.52
COL2A1-202ENST00000380518 ENHOQ6UWT2 76 aa11.81□□□□□ -0.52
COL2A1-202ENST00000380518 DCANP1Q8TF63 244 aa11.81□□□□□ -0.52
COL2A1-202ENST00000380518 UBE2D4Q9Y2X8 147 aa11.81□□□□□ -0.52
COL2A1-202ENST00000380518 TANC2Q9HCD6 1990 aa11.8□□□□□ -0.52
COL2A1-202ENST00000380518 C10orf142B7Z368 130 aa11.8□□□□□ -0.52
COL2A1-202ENST00000380518 SCXQ7RTU7 201 aa11.8□□□□□ -0.52
COL2A1-202ENST00000380518 MRPS12O15235 138 aaKnown RBP11.79□□□□□ -0.52
COL2A1-202ENST00000380518 CCKP06307 115 aa11.79□□□□□ -0.52
COL2A1-202ENST00000380518 HCFC1P51610 2035 aa11.79□□□□□ -0.52
COL2A1-202ENST00000380518 FAM19A5Q7Z5A7 132 aaPredicted RBP11.79□□□□□ -0.52
COL2A1-202ENST00000380518 ZNF843Q8N446 348 aa11.79□□□□□ -0.52
COL2A1-202ENST00000380518 LST1O00453 97 aa11.78□□□□□ -0.52
COL2A1-202ENST00000380518 Q6ZS46 218 aa11.78□□□□□ -0.52
COL2A1-202ENST00000380518 GAS8-AS1O95177 125 aa11.78□□□□□ -0.52
COL2A1-202ENST00000380518 TRAV10A0A0B4J240 114 aa11.78□□□□□ -0.52
COL2A1-202ENST00000380518 LINC00959A0A1B0GUT2 108 aa11.78□□□□□ -0.52
COL2A1-202ENST00000380518 SEC61GP60059 68 aa11.78□□□□□ -0.52
COL2A1-202ENST00000380518 MRGPRG-AS1Q2M3A8 158 aa11.77□□□□□ -0.53
COL2A1-202ENST00000380518 LELP1Q5T871 98 aa11.77□□□□□ -0.53
COL2A1-202ENST00000380518 NUP210LQ5VU65 1888 aa11.76□□□□□ -0.53
COL2A1-202ENST00000380518 UBE2D1P51668 147 aa11.76□□□□□ -0.53
COL2A1-202ENST00000380518 Q6ZQY7 126 aa11.76□□□□□ -0.53
COL2A1-202ENST00000380518 FAM236DA0A1B0GTK5 79 aa11.76□□□□□ -0.53
COL2A1-202ENST00000380518 FAM236CP0DP71 79 aa11.76□□□□□ -0.53
COL2A1-202ENST00000380518 C1orf158Q8N1D5 194 aa11.76□□□□□ -0.53
COL2A1-202ENST00000380518 USP17L23D6RBM5 183 aa11.76□□□□□ -0.53
COL2A1-202ENST00000380518 WFDC10AQ9H1F0 79 aa11.76□□□□□ -0.53
COL2A1-202ENST00000380518 COL4A4P53420 1690 aaPredicted RBP11.76□□□□□ -0.53
COL2A1-202ENST00000380518 C18orf65Q6ZTR6 163 aa11.76□□□□□ -0.53
COL2A1-202ENST00000380518 LOC100131303A0A0U1RQF7 123 aa11.75□□□□□ -0.53
COL2A1-202ENST00000380518 C3orf22Q8N5N4 141 aa11.75□□□□□ -0.53
COL2A1-202ENST00000380518 M0R378 163 aa11.75□□□□□ -0.53
COL2A1-202ENST00000380518 KPRPQ5T749 579 aaPredicted RBP11.75□□□□□ -0.53
COL2A1-202ENST00000380518 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.75□□□□□ -0.53
COL2A1-202ENST00000380518 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.74□□□□□ -0.53
COL2A1-202ENST00000380518 LY6G6DO95868 133 aa11.74□□□□□ -0.53
COL2A1-202ENST00000380518 BRK1Q8WUW1 75 aa11.74□□□□□ -0.53
COL2A1-202ENST00000380518 IMUPQ9GZP8 106 aa11.74□□□□□ -0.53
COL2A1-202ENST00000380518 JMJD1CQ15652 2540 aa11.73□□□□□ -0.53
COL2A1-202ENST00000380518 PRM2P04554 102 aa11.73□□□□□ -0.53
COL2A1-202ENST00000380518 UBE2D3P61077 147 aa11.73□□□□□ -0.53
COL2A1-202ENST00000380518 UBE2D2P62837 147 aa11.73□□□□□ -0.53
COL2A1-202ENST00000380518 IGIPA6NJ69 53 aa11.73□□□□□ -0.53
COL2A1-202ENST00000380518 LINC00526Q96FQ7 95 aa11.73□□□□□ -0.53
COL2A1-202ENST00000380518 IGLV4-69A0A075B6H9 119 aa11.72□□□□□ -0.53
COL2A1-202ENST00000380518 IGKV2-28A0A075B6P5 120 aa11.72□□□□□ -0.53
COL2A1-202ENST00000380518 IGKV2D-28P01615 120 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms