RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 CDKN2A-AS1Q9UH64 79 aa8.74□□□□□ -1.01
RFC3-201ENST00000380071 ITPR3Q14573 2671 aa8.74□□□□□ -1.01
RFC3-201ENST00000380071 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.73□□□□□ -1.01
RFC3-201ENST00000380071 COX6A2Q02221 97 aa8.73□□□□□ -1.01
RFC3-201ENST00000380071 Q1RN00 199 aa8.73□□□□□ -1.01
RFC3-201ENST00000380071 GEMIN7Q9H840 131 aaKnown RBP8.73□□□□□ -1.01
RFC3-201ENST00000380071 ESM1Q9NQ30 184 aa8.73□□□□□ -1.01
RFC3-201ENST00000380071 A0A1B0GV72 72 aa8.73□□□□□ -1.01
RFC3-201ENST00000380071 CCL24O00175 119 aa8.73□□□□□ -1.01
RFC3-201ENST00000380071 C9JAW5 83 aa8.72□□□□□ -1.01
RFC3-201ENST00000380071 LINC00694P0DN24 101 aa8.72□□□□□ -1.01
RFC3-201ENST00000380071 SLC25A20O43772 301 aa8.72□□□□□ -1.01
RFC3-201ENST00000380071 NDUFA7O95182 113 aa8.72□□□□□ -1.01
RFC3-201ENST00000380071 CKS1BP61024 79 aa8.72□□□□□ -1.01
RFC3-201ENST00000380071 Q6ZTI0 123 aa8.72□□□□□ -1.01
RFC3-201ENST00000380071 TMEM86BQ8N661 226 aa8.72□□□□□ -1.01
RFC3-201ENST00000380071 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
RFC3-201ENST00000380071 NOTCH3Q9UM47 2321 aa8.72□□□□□ -1.01
RFC3-201ENST00000380071 NIPBLQ6KC79 2804 aaeCLIP8.72□□□□□ -1.01
RFC3-201ENST00000380071 HIST2H2BCQ6DN03 193 aa8.71□□□□□ -1.01
RFC3-201ENST00000380071 DGAT2L7PQ6IED9 249 aa8.71□□□□□ -1.01
RFC3-201ENST00000380071 DAND5Q8N907 189 aa8.71□□□□□ -1.01
RFC3-201ENST00000380071 IL17DQ8TAD2 202 aa8.71□□□□□ -1.01
RFC3-201ENST00000380071 SPANXDQ9BXN6 97 aa8.71□□□□□ -1.01
RFC3-201ENST00000380071 SPANXCQ9NY87 97 aa8.71□□□□□ -1.01
RFC3-201ENST00000380071 ZFAND6Q6FIF0 208 aa8.71□□□□□ -1.02
RFC3-201ENST00000380071 TMEM101Q96IK0 257 aa8.71□□□□□ -1.02
RFC3-201ENST00000380071 CITED2Q99967 270 aaPredicted RBP8.71□□□□□ -1.02
RFC3-201ENST00000380071 TRAV25A0A0B4J276 109 aa8.7□□□□□ -1.02
RFC3-201ENST00000380071 TRIAP1O43715 76 aa8.7□□□□□ -1.02
RFC3-201ENST00000380071 MIAQ16674 131 aa8.7□□□□□ -1.02
RFC3-201ENST00000380071 NTM-AS1Q6ZSK4 140 aa8.7□□□□□ -1.02
RFC3-201ENST00000380071 CCDC168Q8NDH2 2452 aa8.7□□□□□ -1.02
RFC3-201ENST00000380071 TIRAPP58753 221 aa8.7□□□□□ -1.02
RFC3-201ENST00000380071 ANK3Q12955 4377 aaKnown RBP8.7□□□□□ -1.02
RFC3-201ENST00000380071 SETD2Q9BYW2 2564 aaPredicted RBP8.69□□□□□ -1.02
RFC3-201ENST00000380071 IGLV5-45A0A087WSX0 123 aa8.69□□□□□ -1.02
RFC3-201ENST00000380071 TRBV30A0A0K0K1B3 111 aa8.69□□□□□ -1.02
RFC3-201ENST00000380071 LINC00242Q5T6M2 205 aa8.69□□□□□ -1.02
RFC3-201ENST00000380071 WFDC10AQ9H1F0 79 aa8.69□□□□□ -1.02
RFC3-201ENST00000380071 GIG44P09565 113 aaPredicted RBP8.68□□□□□ -1.02
RFC3-201ENST00000380071 NOP10Q9NPE3 64 aaKnown RBP8.68□□□□□ -1.02
RFC3-201ENST00000380071 GAGE12JA6NER3 117 aa8.68□□□□□ -1.02
RFC3-201ENST00000380071 K7EQD1 137 aa8.68□□□□□ -1.02
RFC3-201ENST00000380071 GAGE4Q13068 117 aa8.68□□□□□ -1.02
RFC3-201ENST00000380071 GAGE5Q13069 117 aa8.68□□□□□ -1.02
RFC3-201ENST00000380071 ATXN8Q156A1 80 aa8.68□□□□□ -1.02
RFC3-201ENST00000380071 FLNAP21333 2647 aaKnown RBP8.68□□□□□ -1.02
RFC3-201ENST00000380071 TRAV13-1A0A0B4J241 112 aa8.67□□□□□ -1.02
RFC3-201ENST00000380071 RPL36AP83881 106 aaKnown RBP8.67□□□□□ -1.02
RFC3-201ENST00000380071 LINC01620Q4KN68 170 aa8.67□□□□□ -1.02
RFC3-201ENST00000380071 RPL36ALQ969Q0 106 aaKnown RBP8.67□□□□□ -1.02
RFC3-201ENST00000380071 ZNF625Q96I27 306 aaPredicted RBP8.67□□□□□ -1.02
RFC3-201ENST00000380071 ICOSQ9Y6W8 199 aa8.67□□□□□ -1.02
RFC3-201ENST00000380071 NDUFA1O15239 70 aa8.66□□□□□ -1.02
RFC3-201ENST00000380071 JMJD1CQ15652 2540 aa8.66□□□□□ -1.02
RFC3-201ENST00000380071 C2CD3Q4AC94 2353 aa8.66□□□□□ -1.02
RFC3-201ENST00000380071 A0A0U1RRA0 63 aa8.66□□□□□ -1.02
RFC3-201ENST00000380071 M0QXV9 152 aa8.66□□□□□ -1.02
RFC3-201ENST00000380071 PLA2G2AP14555 144 aa8.66□□□□□ -1.02
RFC3-201ENST00000380071 SETXQ7Z333 2677 aaKnown RBP8.66□□□□□ -1.02
RFC3-201ENST00000380071 TRAV4A0A0B4J268 109 aa8.65□□□□□ -1.02
RFC3-201ENST00000380071 HERVK_113P63121 156 aa8.65□□□□□ -1.02
RFC3-201ENST00000380071 LINC01006Q8NI28 216 aa8.65□□□□□ -1.02
RFC3-201ENST00000380071 NTN5Q8WTR8 489 aaPredicted RBP8.65□□□□□ -1.02
RFC3-201ENST00000380071 Q9H8V8 135 aa8.65□□□□□ -1.02
RFC3-201ENST00000380071 IGLV5-39A0A0G2JS06 123 aa8.65□□□□□ -1.02
RFC3-201ENST00000380071 TRBV10-1A0A0K0K1A3 114 aa8.65□□□□□ -1.02
RFC3-201ENST00000380071 RPL35AP18077 110 aaKnown RBP8.65□□□□□ -1.02
RFC3-201ENST00000380071 ACANP16112 2415 aa8.64□□□□□ -1.03
RFC3-201ENST00000380071 LOC100131303A0A0U1RQF7 123 aa8.64□□□□□ -1.03
RFC3-201ENST00000380071 TEX49A0A1B0GTD5 131 aa8.64□□□□□ -1.03
RFC3-201ENST00000380071 PLAC8L1A1L4L8 177 aa8.64□□□□□ -1.03
RFC3-201ENST00000380071 TIMM17BO60830 172 aa8.64□□□□□ -1.03
RFC3-201ENST00000380071 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
RFC3-201ENST00000380071 DAZ4Q86SG3 579 aaKnown RBP8.64□□□□□ -1.03
RFC3-201ENST00000380071 CLEC2BQ92478 149 aa8.64□□□□□ -1.03
RFC3-201ENST00000380071 DAZ3Q9NR90 486 aaKnown RBP8.64□□□□□ -1.03
RFC3-201ENST00000380071 YAE1D1Q9NRH1 226 aa8.64□□□□□ -1.03
RFC3-201ENST00000380071 CDC42SE2Q9NRR3 84 aa8.64□□□□□ -1.03
RFC3-201ENST00000380071 TRAV26-1A0A087WT03 109 aa8.64□□□□□ -1.03
RFC3-201ENST00000380071 SMIM1B2RUZ4 78 aa8.63□□□□□ -1.03
RFC3-201ENST00000380071 GAGE7O76087 117 aa8.63□□□□□ -1.03
RFC3-201ENST00000380071 GAGE12FP0CL80 117 aa8.63□□□□□ -1.03
RFC3-201ENST00000380071 GAGE12GP0CL81 117 aa8.63□□□□□ -1.03
RFC3-201ENST00000380071 GAGE12IP0CL82 117 aa8.63□□□□□ -1.03
RFC3-201ENST00000380071 RPL13AP40429 203 aaKnown RBP8.63□□□□□ -1.03
RFC3-201ENST00000380071 CSDC2Q9Y534 153 aaKnown RBP8.63□□□□□ -1.03
RFC3-201ENST00000380071 TRBV10-2A0A0K0K1G8 114 aa8.63□□□□□ -1.03
RFC3-201ENST00000380071 IFITM1P13164 125 aa8.63□□□□□ -1.03
RFC3-201ENST00000380071 KRTAP1-1Q07627 177 aa8.63□□□□□ -1.03
RFC3-201ENST00000380071 TMEM262E9PQX1 116 aa8.62□□□□□ -1.03
RFC3-201ENST00000380071 FAM19A3Q7Z5A8 133 aa8.62□□□□□ -1.03
RFC3-201ENST00000380071 LINC00308Q8TCZ7 52 aa8.62□□□□□ -1.03
RFC3-201ENST00000380071 RNF183Q96D59 192 aa8.62□□□□□ -1.03
RFC3-201ENST00000380071 C19orf73Q9NVV2 129 aa8.62□□□□□ -1.03
RFC3-201ENST00000380071 TRGV2A0A075B6R0 118 aa8.62□□□□□ -1.03
RFC3-201ENST00000380071 H7C423 109 aa8.62□□□□□ -1.03
RFC3-201ENST00000380071 CIRBPQ14011 172 aaKnown RBP8.62□□□□□ -1.03
RFC3-201ENST00000380071 TEX29Q8N6K0 151 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms