RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 K7EQD1 137 aa13.04□□□□□ -0.32
TDP2-202ENST00000378198 CSDC2Q9Y534 153 aaKnown RBP13.04□□□□□ -0.32
TDP2-202ENST00000378198 ICOSQ9Y6W8 199 aa13.04□□□□□ -0.32
TDP2-202ENST00000378198 A0A1W2PRX2 142 aa13.04□□□□□ -0.32
TDP2-202ENST00000378198 TMEM262E9PQX1 116 aa13.04□□□□□ -0.32
TDP2-202ENST00000378198 DAZ2Q13117 558 aaKnown RBP13.04□□□□□ -0.32
TDP2-202ENST00000378198 DAZ4Q86SG3 579 aaKnown RBP13.04□□□□□ -0.32
TDP2-202ENST00000378198 DAZ3Q9NR90 486 aaKnown RBP13.04□□□□□ -0.32
TDP2-202ENST00000378198 TRAV4A0A0B4J268 109 aa13.03□□□□□ -0.32
TDP2-202ENST00000378198 COX6CP09669 75 aa13.03□□□□□ -0.32
TDP2-202ENST00000378198 CMC4P56277 68 aaPredicted RBP13.03□□□□□ -0.32
TDP2-202ENST00000378198 CIRBPQ14011 172 aaKnown RBP13.03□□□□□ -0.32
TDP2-202ENST00000378198 MXRA5Q9NR99 2828 aa13.03□□□□□ -0.32
TDP2-202ENST00000378198 COX6A2Q02221 97 aa13.03□□□□□ -0.32
TDP2-202ENST00000378198 LINC00242Q5T6M2 205 aa13.03□□□□□ -0.32
TDP2-202ENST00000378198 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.03□□□□□ -0.32
TDP2-202ENST00000378198 C11orf44Q8N8P7 122 aa13.03□□□□□ -0.32
TDP2-202ENST00000378198 TRBV10-2A0A0K0K1G8 114 aa13.02□□□□□ -0.33
TDP2-202ENST00000378198 NPC2P61916 151 aa13.02□□□□□ -0.33
TDP2-202ENST00000378198 IGLV5-39A0A0G2JS06 123 aa13.01□□□□□ -0.33
TDP2-202ENST00000378198 LINC00694P0DN24 101 aa13.01□□□□□ -0.33
TDP2-202ENST00000378198 Q6ZTI0 123 aa13.01□□□□□ -0.33
TDP2-202ENST00000378198 MYO18BQ8IUG5 2567 aa13□□□□□ -0.33
TDP2-202ENST00000378198 A0A1B0GV72 72 aa13□□□□□ -0.33
TDP2-202ENST00000378198 XGP55808 180 aa13□□□□□ -0.33
TDP2-202ENST00000378198 ACACBO00763 2458 aa13□□□□□ -0.33
TDP2-202ENST00000378198 NTM-AS1Q6ZSK4 140 aa13□□□□□ -0.33
TDP2-202ENST00000378198 POLQO75417 2590 aa12.99□□□□□ -0.33
TDP2-202ENST00000378198 MT-ATP8P03928 68 aa12.99□□□□□ -0.33
TDP2-202ENST00000378198 ESM1Q9NQ30 184 aa12.99□□□□□ -0.33
TDP2-202ENST00000378198 CREBBPQ92793 2442 aa12.98□□□□□ -0.33
TDP2-202ENST00000378198 WFDC11Q8NEX6 87 aa12.98□□□□□ -0.33
TDP2-202ENST00000378198 NTN5Q8WTR8 489 aaPredicted RBP12.98□□□□□ -0.33
TDP2-202ENST00000378198 CITED2Q99967 270 aaPredicted RBP12.98□□□□□ -0.33
TDP2-202ENST00000378198 Q9H8V8 135 aa12.98□□□□□ -0.33
TDP2-202ENST00000378198 CIDEAO60543 219 aa12.98□□□□□ -0.33
TDP2-202ENST00000378198 TEX15Q9BXT5 2789 aa12.98□□□□□ -0.33
TDP2-202ENST00000378198 FAM208BQ5VWN6 2430 aa12.97□□□□□ -0.33
TDP2-202ENST00000378198 RPL13AP40429 203 aaKnown RBP12.97□□□□□ -0.33
TDP2-202ENST00000378198 CDC42SE2Q9NRR3 84 aa12.97□□□□□ -0.33
TDP2-202ENST00000378198 GAGE12JA6NER3 117 aa12.97□□□□□ -0.33
TDP2-202ENST00000378198 SMIM1B2RUZ4 78 aa12.97□□□□□ -0.33
TDP2-202ENST00000378198 GAGE4Q13068 117 aa12.97□□□□□ -0.33
TDP2-202ENST00000378198 GAGE5Q13069 117 aa12.97□□□□□ -0.33
TDP2-202ENST00000378198 DAND5Q8N907 189 aa12.97□□□□□ -0.33
TDP2-202ENST00000378198 COPS9Q8WXC6 57 aa12.97□□□□□ -0.33
TDP2-202ENST00000378198 C16orf74Q96GX8 76 aa12.97□□□□□ -0.33
TDP2-202ENST00000378198 NOP10Q9NPE3 64 aaKnown RBP12.97□□□□□ -0.33
TDP2-202ENST00000378198 LINC00308Q8TCZ7 52 aa12.96□□□□□ -0.33
TDP2-202ENST00000378198 TRAV13-1A0A0B4J241 112 aa12.95□□□□□ -0.34
TDP2-202ENST00000378198 UBR5O95071 2799 aaPredicted RBP12.95□□□□□ -0.34
TDP2-202ENST00000378198 H3BT86 120 aa12.95□□□□□ -0.34
TDP2-202ENST00000378198 NDUFA7O95182 113 aa12.95□□□□□ -0.34
TDP2-202ENST00000378198 CKS1BP61024 79 aa12.95□□□□□ -0.34
TDP2-202ENST00000378198 C2orf82Q6UX34 121 aa12.95□□□□□ -0.34
TDP2-202ENST00000378198 FAM110AQ9BQ89 295 aa12.95□□□□□ -0.34
TDP2-202ENST00000378198 H7C423 109 aa12.94□□□□□ -0.34
TDP2-202ENST00000378198 GIG44P09565 113 aaPredicted RBP12.94□□□□□ -0.34
TDP2-202ENST00000378198 C16orf95Q9H693 158 aa12.94□□□□□ -0.34
TDP2-202ENST00000378198 LST1O00453 97 aa12.93□□□□□ -0.34
TDP2-202ENST00000378198 UBE2L6O14933 153 aa12.93□□□□□ -0.34
TDP2-202ENST00000378198 TMEM243Q9BU79 118 aa12.93□□□□□ -0.34
TDP2-202ENST00000378198 ZNF462Q96JM2 2506 aa12.93□□□□□ -0.34
TDP2-202ENST00000378198 LINC01006Q8NI28 216 aa12.93□□□□□ -0.34
TDP2-202ENST00000378198 UBE2WQ96B02 151 aa12.93□□□□□ -0.34
TDP2-202ENST00000378198 PLAC8L1A1L4L8 177 aa12.92□□□□□ -0.34
TDP2-202ENST00000378198 F5H768 121 aa12.92□□□□□ -0.34
TDP2-202ENST00000378198 HERV-K104P63124 156 aa12.92□□□□□ -0.34
TDP2-202ENST00000378198 CLEC2BQ92478 149 aa12.92□□□□□ -0.34
TDP2-202ENST00000378198 ZNF625Q96I27 306 aaPredicted RBP12.92□□□□□ -0.34
TDP2-202ENST00000378198 TEX49A0A1B0GTD5 131 aa12.91□□□□□ -0.34
TDP2-202ENST00000378198 TRBV6-4A0A1B0GX49 114 aa12.91□□□□□ -0.34
TDP2-202ENST00000378198 PRIMA1Q86XR5 153 aa12.91□□□□□ -0.34
TDP2-202ENST00000378198 OVOL2Q9BRP0 275 aa12.91□□□□□ -0.34
TDP2-202ENST00000378198 TRGV2A0A075B6R0 118 aa12.9□□□□□ -0.34
TDP2-202ENST00000378198 IGLV1-51P01701 117 aa12.9□□□□□ -0.34
TDP2-202ENST00000378198 RNASE1P07998 156 aaKnown RBP12.9□□□□□ -0.34
TDP2-202ENST00000378198 MEIG1Q5JSS6 88 aa12.9□□□□□ -0.34
TDP2-202ENST00000378198 PTPN13Q12923 2485 aa12.9□□□□□ -0.34
TDP2-202ENST00000378198 GAGE7O76087 117 aa12.9□□□□□ -0.34
TDP2-202ENST00000378198 GAGE12FP0CL80 117 aa12.9□□□□□ -0.34
TDP2-202ENST00000378198 GAGE12GP0CL81 117 aa12.9□□□□□ -0.34
TDP2-202ENST00000378198 GAGE12IP0CL82 117 aa12.9□□□□□ -0.34
TDP2-202ENST00000378198 USP24Q9UPU5 2620 aa12.9□□□□□ -0.34
TDP2-202ENST00000378198 PPDPFQ9H3Y8 114 aa12.89□□□□□ -0.35
TDP2-202ENST00000378198 C19orf73Q9NVV2 129 aa12.89□□□□□ -0.35
TDP2-202ENST00000378198 NAV2Q8IVL1 2488 aa12.89□□□□□ -0.35
TDP2-202ENST00000378198 TRAV8-4A0A0B4J246 113 aa12.89□□□□□ -0.35
TDP2-202ENST00000378198 A0A0U1RRA0 63 aa12.89□□□□□ -0.35
TDP2-202ENST00000378198 RPL35AP18077 110 aaKnown RBP12.89□□□□□ -0.35
TDP2-202ENST00000378198 CSNK1G2-AS1Q8NCQ2 148 aa12.88□□□□□ -0.35
TDP2-202ENST00000378198 WFDC10AQ9H1F0 79 aa12.88□□□□□ -0.35
TDP2-202ENST00000378198 WNK1Q9H4A3 2382 aa12.87□□□□□ -0.35
TDP2-202ENST00000378198 SOSTDC1Q6X4U4 206 aa12.87□□□□□ -0.35
TDP2-202ENST00000378198 TRGV4A0A0C4DH28 118 aa12.87□□□□□ -0.35
TDP2-202ENST00000378198 LOC100131303A0A0U1RQF7 123 aa12.85□□□□□ -0.35
TDP2-202ENST00000378198 COX7A2LO14548 114 aa12.85□□□□□ -0.35
TDP2-202ENST00000378198 KRTAP1-1Q07627 177 aa12.85□□□□□ -0.35
TDP2-202ENST00000378198 CITED1Q99966 193 aa12.85□□□□□ -0.35
TDP2-202ENST00000378198 LRRK2Q5S007 2527 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms