RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 RBMY1A1P0DJD3 496 aaKnown RBP8.16□□□□□ -1.1
HDAC6-203ENST00000376619 RBMY1CP0DJD4 496 aa8.16□□□□□ -1.1
HDAC6-203ENST00000376619 RBMY1FQ15415 496 aaKnown RBP8.16□□□□□ -1.1
HDAC6-203ENST00000376619 LINC00526Q96FQ7 95 aa8.16□□□□□ -1.1
HDAC6-203ENST00000376619 SLC25A29Q8N8R3 303 aa8.15□□□□□ -1.1
HDAC6-203ENST00000376619 E9PLD3 99 aa8.15□□□□□ -1.1
HDAC6-203ENST00000376619 CFAP126Q5VTH2 177 aa8.15□□□□□ -1.1
HDAC6-203ENST00000376619 MRPL52Q86TS9 123 aaKnown RBP8.15□□□□□ -1.11
HDAC6-203ENST00000376619 LRRC75A-AS1Q8N1F1 130 aa8.15□□□□□ -1.11
HDAC6-203ENST00000376619 C2orf82Q6UX34 121 aa8.14□□□□□ -1.11
HDAC6-203ENST00000376619 IGLV4-3A0A075B6K6 122 aa8.14□□□□□ -1.11
HDAC6-203ENST00000376619 RBMY1BA6NDE4 496 aaKnown RBP8.14□□□□□ -1.11
HDAC6-203ENST00000376619 RBMY1EA6NEQ0 496 aaKnown RBP8.14□□□□□ -1.11
HDAC6-203ENST00000376619 RBMY1DP0C7P1 496 aaKnown RBP8.14□□□□□ -1.11
HDAC6-203ENST00000376619 MORN3Q6PF18 240 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-203ENST00000376619 CNFNQ9BYD5 112 aa8.14□□□□□ -1.11
HDAC6-203ENST00000376619 POLR2KP53803 58 aaKnown RBP8.13□□□□□ -1.11
HDAC6-203ENST00000376619 DPH3Q96FX2 82 aa8.13□□□□□ -1.11
HDAC6-203ENST00000376619 Q9HAA7 133 aa8.13□□□□□ -1.11
HDAC6-203ENST00000376619 K7EQD1 137 aa8.13□□□□□ -1.11
HDAC6-203ENST00000376619 IGHV3-30P01768 117 aa8.12□□□□□ -1.11
HDAC6-203ENST00000376619 IGHV3-33P01772 117 aa8.12□□□□□ -1.11
HDAC6-203ENST00000376619 IGHV3-30-5P0DP03 117 aa8.12□□□□□ -1.11
HDAC6-203ENST00000376619 RHOHQ15669 191 aa8.12□□□□□ -1.11
HDAC6-203ENST00000376619 CLEC2BQ92478 149 aa8.12□□□□□ -1.11
HDAC6-203ENST00000376619 SIVA1O15304 175 aa8.12□□□□□ -1.11
HDAC6-203ENST00000376619 TSHBP01222 138 aa8.12□□□□□ -1.11
HDAC6-203ENST00000376619 ZNF22P17026 224 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-203ENST00000376619 NTN5Q8WTR8 489 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-203ENST00000376619 LGALS9O00182 355 aa8.11□□□□□ -1.11
HDAC6-203ENST00000376619 OXLD1Q5BKU9 147 aa8.11□□□□□ -1.11
HDAC6-203ENST00000376619 VSIG2Q96IQ7 327 aa8.11□□□□□ -1.11
HDAC6-203ENST00000376619 FAM222AQ5U5X8 452 aa8.11□□□□□ -1.11
HDAC6-203ENST00000376619 UBE2WQ96B02 151 aa8.11□□□□□ -1.11
HDAC6-203ENST00000376619 CRPP02741 224 aa8.11□□□□□ -1.11
HDAC6-203ENST00000376619 CFC1BP0CG36 223 aa8.11□□□□□ -1.11
HDAC6-203ENST00000376619 CFC1P0CG37 223 aa8.11□□□□□ -1.11
HDAC6-203ENST00000376619 TSPEAR-AS2P59090 65 aa8.11□□□□□ -1.11
HDAC6-203ENST00000376619 TIMM17AQ99595 171 aa8.11□□□□□ -1.11
HDAC6-203ENST00000376619 SIGMAR1Q99720 223 aa8.11□□□□□ -1.11
HDAC6-203ENST00000376619 IGLV2-18A0A075B6J9 118 aa8.1□□□□□ -1.11
HDAC6-203ENST00000376619 TRAV12-1A0A0B4J245 112 aa8.1□□□□□ -1.11
HDAC6-203ENST00000376619 TRAV26-1A0A087WT03 109 aa8.1□□□□□ -1.11
HDAC6-203ENST00000376619 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-203ENST00000376619 TMEM89A2RUT3 159 aa8.1□□□□□ -1.11
HDAC6-203ENST00000376619 LINC00694P0DN24 101 aa8.1□□□□□ -1.11
HDAC6-203ENST00000376619 PIK3CD-AS1Q5SR53 167 aa8.1□□□□□ -1.11
HDAC6-203ENST00000376619 IGHV4-4A0A075B6R2 117 aa8.1□□□□□ -1.11
HDAC6-203ENST00000376619 TRBV27A0A0K0K1C4 114 aa8.1□□□□□ -1.11
HDAC6-203ENST00000376619 ATP6V0E2Q8NHE4 81 aa8.1□□□□□ -1.11
HDAC6-203ENST00000376619 INSL3P51460 131 aa8.09□□□□□ -1.11
HDAC6-203ENST00000376619 SLC25A20O43772 301 aa8.09□□□□□ -1.11
HDAC6-203ENST00000376619 NFE4Q86UQ8 179 aa8.09□□□□□ -1.11
HDAC6-203ENST00000376619 TMEM263Q8WUH6 116 aaKnown RBP8.09□□□□□ -1.11
HDAC6-203ENST00000376619 C9orf85Q96MD7 179 aa8.09□□□□□ -1.11
HDAC6-203ENST00000376619 LEPROTO15243 131 aa8.08□□□□□ -1.12
HDAC6-203ENST00000376619 SS18Q15532 418 aa8.08□□□□□ -1.12
HDAC6-203ENST00000376619 S100A7L2Q5SY68 101 aa8.08□□□□□ -1.12
HDAC6-203ENST00000376619 C1orf158Q8N1D5 194 aa8.08□□□□□ -1.12
HDAC6-203ENST00000376619 KLK12Q9UKR0 248 aa8.08□□□□□ -1.12
HDAC6-203ENST00000376619 SNCGO76070 127 aa8.08□□□□□ -1.12
HDAC6-203ENST00000376619 MED14OSP0DP75 135 aa8.08□□□□□ -1.12
HDAC6-203ENST00000376619 ZFHX3Q15911 3703 aa8.08□□□□□ -1.12
HDAC6-203ENST00000376619 A0A0J9YXY3 114 aa8.07□□□□□ -1.12
HDAC6-203ENST00000376619 IGIPA6NJ69 53 aa8.07□□□□□ -1.12
HDAC6-203ENST00000376619 TSPAN13O95857 204 aa8.07□□□□□ -1.12
HDAC6-203ENST00000376619 HERVK_113P63121 156 aa8.07□□□□□ -1.12
HDAC6-203ENST00000376619 C10orf126Q8N4M7 172 aa8.07□□□□□ -1.12
HDAC6-203ENST00000376619 TTC32Q5I0X7 151 aa8.07□□□□□ -1.12
HDAC6-203ENST00000376619 CMC4P56277 68 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-203ENST00000376619 NDUFA11Q86Y39 141 aa8.06□□□□□ -1.12
HDAC6-203ENST00000376619 C16orf74Q96GX8 76 aa8.06□□□□□ -1.12
HDAC6-203ENST00000376619 TCL1BO95988 128 aa8.06□□□□□ -1.12
HDAC6-203ENST00000376619 SPANXA1Q9NS26 97 aa8.06□□□□□ -1.12
HDAC6-203ENST00000376619 TMEM86BQ8N661 226 aa8.06□□□□□ -1.12
HDAC6-203ENST00000376619 MIR7-3HGQ8N6C7 128 aa8.06□□□□□ -1.12
HDAC6-203ENST00000376619 HIGD1BQ9P298 99 aa8.06□□□□□ -1.12
HDAC6-203ENST00000376619 TINCRA0A1B0GVN0 87 aa8.05□□□□□ -1.12
HDAC6-203ENST00000376619 ATXN8Q156A1 80 aa8.05□□□□□ -1.12
HDAC6-203ENST00000376619 CARD19Q96LW7 228 aa8.05□□□□□ -1.12
HDAC6-203ENST00000376619 ATP5G1P05496 136 aa8.05□□□□□ -1.12
HDAC6-203ENST00000376619 LINC00269Q8N2A0 174 aa8.05□□□□□ -1.12
HDAC6-203ENST00000376619 EDA2RQ9HAV5 297 aa8.05□□□□□ -1.12
HDAC6-203ENST00000376619 GAGE12HA6NDE8 117 aa8.05□□□□□ -1.12
HDAC6-203ENST00000376619 LINC00315P59091 139 aa8.05□□□□□ -1.12
HDAC6-203ENST00000376619 COX8CQ7Z4L0 72 aa8.05□□□□□ -1.12
HDAC6-203ENST00000376619 POM121L12Q8N7R1 296 aa8.05□□□□□ -1.12
HDAC6-203ENST00000376619 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-203ENST00000376619 TRAV4A0A0B4J268 109 aa8.04□□□□□ -1.12
HDAC6-203ENST00000376619 IGHV1-58A0A0C4DH39 117 aa8.04□□□□□ -1.12
HDAC6-203ENST00000376619 KIF25-AS1Q9Y6Z4 181 aa8.04□□□□□ -1.12
HDAC6-203ENST00000376619 BSNQ9UPA5 3926 aa8.04□□□□□ -1.12
HDAC6-203ENST00000376619 IGLV4-69A0A075B6H9 119 aa8.04□□□□□ -1.12
HDAC6-203ENST00000376619 F8W1H4 67 aa8.04□□□□□ -1.12
HDAC6-203ENST00000376619 TAL2Q16559 108 aa8.04□□□□□ -1.12
HDAC6-203ENST00000376619 COX6A2Q02221 97 aa8.03□□□□□ -1.12
HDAC6-203ENST00000376619 GAGE2AQ6NT46 116 aa8.03□□□□□ -1.12
HDAC6-203ENST00000376619 RETNQ9HD89 108 aa8.03□□□□□ -1.12
HDAC6-203ENST00000376619 FBN1P35555 2871 aaKnown RBP8.03□□□□□ -1.12
HDAC6-203ENST00000376619 TRAV8-4A0A0B4J246 113 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms