RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 CCL18P55774 89 aa11.77□□□□□ -0.53
HLA-DMA-201ENST00000374843 RBX1P62877 108 aa11.77□□□□□ -0.53
HLA-DMA-201ENST00000374843 MPV17L2Q567V2 206 aa11.77□□□□□ -0.53
HLA-DMA-201ENST00000374843 PET117Q6UWS5 81 aa11.77□□□□□ -0.53
HLA-DMA-201ENST00000374843 Q6ZN92 141 aa11.77□□□□□ -0.53
HLA-DMA-201ENST00000374843 LINC00588Q9Y4M8 146 aa11.77□□□□□ -0.53
HLA-DMA-201ENST00000374843 PMVKQ15126 192 aa11.76□□□□□ -0.53
HLA-DMA-201ENST00000374843 TMEM101Q96IK0 257 aa11.76□□□□□ -0.53
HLA-DMA-201ENST00000374843 OPRPNQ99935 248 aaPredicted RBP11.76□□□□□ -0.53
HLA-DMA-201ENST00000374843 CDC42SE2Q9NRR3 84 aa11.76□□□□□ -0.53
HLA-DMA-201ENST00000374843 IGLV4-60A0A075B6I1 120 aa11.75□□□□□ -0.53
HLA-DMA-201ENST00000374843 LINC01545Q5VT33 79 aa11.75□□□□□ -0.53
HLA-DMA-201ENST00000374843 DGAT2L7PQ6IED9 249 aa11.75□□□□□ -0.53
HLA-DMA-201ENST00000374843 WFDC10BQ8IUB3 73 aa11.75□□□□□ -0.53
HLA-DMA-201ENST00000374843 ZNF664Q8N3J9 261 aa11.75□□□□□ -0.53
HLA-DMA-201ENST00000374843 Q8N976 141 aa11.75□□□□□ -0.53
HLA-DMA-201ENST00000374843 VPS13DQ5THJ4 4388 aa11.74□□□□□ -0.53
HLA-DMA-201ENST00000374843 PRSS1P07477 247 aa11.74□□□□□ -0.53
HLA-DMA-201ENST00000374843 AKR1D1P51857 326 aa11.74□□□□□ -0.53
HLA-DMA-201ENST00000374843 ODF1Q14990 250 aa11.74□□□□□ -0.53
HLA-DMA-201ENST00000374843 LGALS9CQ6DKI2 356 aa11.74□□□□□ -0.53
HLA-DMA-201ENST00000374843 ZFAND6Q6FIF0 208 aa11.74□□□□□ -0.53
HLA-DMA-201ENST00000374843 CST9LQ9H4G1 147 aa11.74□□□□□ -0.53
HLA-DMA-201ENST00000374843 A0A087WX48 190 aa11.73□□□□□ -0.53
HLA-DMA-201ENST00000374843 TMEM262E9PQX1 116 aa11.73□□□□□ -0.53
HLA-DMA-201ENST00000374843 DNAH10OSP0CZ25 163 aa11.73□□□□□ -0.53
HLA-DMA-201ENST00000374843 JOSD1Q15040 202 aaPredicted RBP11.73□□□□□ -0.53
HLA-DMA-201ENST00000374843 LINC01556Q5JQF7 62 aa11.73□□□□□ -0.53
HLA-DMA-201ENST00000374843 TEX43Q6ZNM6 134 aa11.73□□□□□ -0.53
HLA-DMA-201ENST00000374843 VCX2Q9H322 139 aa11.73□□□□□ -0.53
HLA-DMA-201ENST00000374843 C20orf202A1L168 122 aa11.72□□□□□ -0.53
HLA-DMA-201ENST00000374843 PRSS29PA6NIE9 313 aa11.72□□□□□ -0.53
HLA-DMA-201ENST00000374843 Q8N3U1 123 aa11.72□□□□□ -0.53
HLA-DMA-201ENST00000374843 DNAH1Q9P2D7 4330 aa11.71□□□□□ -0.53
HLA-DMA-201ENST00000374843 ZC2HC1BQ5TFG8 222 aa11.71□□□□□ -0.53
HLA-DMA-201ENST00000374843 C2orf88Q9BSF0 95 aa11.71□□□□□ -0.53
HLA-DMA-201ENST00000374843 F8VRH5 84 aa11.7□□□□□ -0.54
HLA-DMA-201ENST00000374843 H0Y8G0 127 aa11.7□□□□□ -0.54
HLA-DMA-201ENST00000374843 RNASE13Q5GAN3 156 aaKnown RBP11.7□□□□□ -0.54
HLA-DMA-201ENST00000374843 PYY3Q5JQD4 70 aa11.7□□□□□ -0.54
HLA-DMA-201ENST00000374843 IGLV4-69A0A075B6H9 119 aa11.69□□□□□ -0.54
HLA-DMA-201ENST00000374843 C3orf84H3BNL1 204 aa11.69□□□□□ -0.54
HLA-DMA-201ENST00000374843 UBE2D1P51668 147 aa11.69□□□□□ -0.54
HLA-DMA-201ENST00000374843 FAM19A3Q7Z5A8 133 aa11.69□□□□□ -0.54
HLA-DMA-201ENST00000374843 PRR34Q9NV39 138 aa11.69□□□□□ -0.54
HLA-DMA-201ENST00000374843 CHTOPQ9Y3Y2 248 aaKnown RBP11.69□□□□□ -0.54
HLA-DMA-201ENST00000374843 ALMS1Q8TCU4 4167 aa11.68□□□□□ -0.54
HLA-DMA-201ENST00000374843 SIVA1O15304 175 aa11.68□□□□□ -0.54
HLA-DMA-201ENST00000374843 SMIM6P0DI80 62 aa11.68□□□□□ -0.54
HLA-DMA-201ENST00000374843 IGLC3P0DOY3 106 aa11.68□□□□□ -0.54
HLA-DMA-201ENST00000374843 MRPL35Q9NZE8 188 aaKnown RBP11.68□□□□□ -0.54
HLA-DMA-201ENST00000374843 PLNP26678 52 aa11.67□□□□□ -0.54
HLA-DMA-201ENST00000374843 NFE4Q86UQ8 179 aa11.67□□□□□ -0.54
HLA-DMA-201ENST00000374843 LYSTQ99698 3801 aa11.67□□□□□ -0.54
HLA-DMA-201ENST00000374843 TENM2Q9NT68 2774 aa11.66□□□□□ -0.54
HLA-DMA-201ENST00000374843 DPM2O94777 84 aa11.66□□□□□ -0.54
HLA-DMA-201ENST00000374843 SCGB1D1O95968 90 aa11.66□□□□□ -0.54
HLA-DMA-201ENST00000374843 IGHV3-30P01768 117 aa11.66□□□□□ -0.54
HLA-DMA-201ENST00000374843 IGHV3-33P01772 117 aa11.66□□□□□ -0.54
HLA-DMA-201ENST00000374843 ANGP03950 147 aaKnown RBP11.66□□□□□ -0.54
HLA-DMA-201ENST00000374843 IGHV3-30-3P0DP02 117 aa11.66□□□□□ -0.54
HLA-DMA-201ENST00000374843 IGHV3-30-5P0DP03 117 aa11.66□□□□□ -0.54
HLA-DMA-201ENST00000374843 CASC10Q5T4H9 136 aa11.66□□□□□ -0.54
HLA-DMA-201ENST00000374843 UBE2DNLQ8IWF7 75 aa11.66□□□□□ -0.54
HLA-DMA-201ENST00000374843 LINC00269Q8N2A0 174 aa11.66□□□□□ -0.54
HLA-DMA-201ENST00000374843 K7EP13 123 aa11.65□□□□□ -0.54
HLA-DMA-201ENST00000374843 CCL25O15444 150 aa11.65□□□□□ -0.54
HLA-DMA-201ENST00000374843 PMCHL2Q9BQD1 86 aa11.65□□□□□ -0.54
HLA-DMA-201ENST00000374843 A0A0J9YXV3 536 aa11.64□□□□□ -0.55
HLA-DMA-201ENST00000374843 TINCRA0A1B0GVN0 87 aa11.64□□□□□ -0.55
HLA-DMA-201ENST00000374843 IGKCP01834 107 aa11.64□□□□□ -0.55
HLA-DMA-201ENST00000374843 REG3AQ06141 175 aa11.64□□□□□ -0.55
HLA-DMA-201ENST00000374843 Q9H8V8 135 aa11.64□□□□□ -0.55
HLA-DMA-201ENST00000374843 KLK12Q9UKR0 248 aa11.64□□□□□ -0.55
HLA-DMA-201ENST00000374843 IGLV5-45A0A087WSX0 123 aa11.63□□□□□ -0.55
HLA-DMA-201ENST00000374843 TRAV13-1A0A0B4J241 112 aa11.63□□□□□ -0.55
HLA-DMA-201ENST00000374843 LINC00959A0A1B0GUT2 108 aa11.63□□□□□ -0.55
HLA-DMA-201ENST00000374843 C11orf86A6NJI1 115 aa11.63□□□□□ -0.55
HLA-DMA-201ENST00000374843 SEC11AP67812 179 aa11.63□□□□□ -0.55
HLA-DMA-201ENST00000374843 LINC00242Q5T6M2 205 aa11.63□□□□□ -0.55
HLA-DMA-201ENST00000374843 C10orf126Q8N4M7 172 aa11.63□□□□□ -0.55
HLA-DMA-201ENST00000374843 CHAC1Q9BUX1 264 aa11.63□□□□□ -0.55
HLA-DMA-201ENST00000374843 DNAH6Q9C0G6 4158 aa11.62□□□□□ -0.55
HLA-DMA-201ENST00000374843 CLPSL2Q6UWE3 100 aa11.62□□□□□ -0.55
HLA-DMA-201ENST00000374843 ENHOQ6UWT2 76 aa11.62□□□□□ -0.55
HLA-DMA-201ENST00000374843 HERVK_113P63121 156 aa11.61□□□□□ -0.55
HLA-DMA-201ENST00000374843 MIAQ16674 131 aa11.61□□□□□ -0.55
HLA-DMA-201ENST00000374843 IBA57-AS1B1ANH7 110 aa11.6□□□□□ -0.55
HLA-DMA-201ENST00000374843 CRPP02741 224 aa11.6□□□□□ -0.55
HLA-DMA-201ENST00000374843 ZNF22P17026 224 aaPredicted RBP11.6□□□□□ -0.55
HLA-DMA-201ENST00000374843 SS18Q15532 418 aa11.6□□□□□ -0.55
HLA-DMA-201ENST00000374843 TRAV8-4A0A0B4J246 113 aa11.59□□□□□ -0.55
HLA-DMA-201ENST00000374843 IGKV3OR2-268A0A0C4DH90 116 aa11.59□□□□□ -0.55
HLA-DMA-201ENST00000374843 CDPF1Q6NVV7 123 aa11.59□□□□□ -0.55
HLA-DMA-201ENST00000374843 ATOH7Q8N100 152 aa11.59□□□□□ -0.55
HLA-DMA-201ENST00000374843 UBE2WQ96B02 151 aa11.59□□□□□ -0.55
HLA-DMA-201ENST00000374843 GEMIN7Q9H840 131 aaKnown RBP11.59□□□□□ -0.55
HLA-DMA-201ENST00000374843 TRAV9-2A0A087WT02 112 aa11.58□□□□□ -0.56
HLA-DMA-201ENST00000374843 IGHV3OR16-9A0A0B4J2B5 98 aa11.57□□□□□ -0.56
HLA-DMA-201ENST00000374843 COX6A2Q02221 97 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms