RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 CRLF1O75462 422 aa5.75□□□□□ -1.49
HERC4-202ENST00000373700 TRBV7-3A0A075B6L6 115 aa5.75□□□□□ -1.49
HERC4-202ENST00000373700 CRYGDP07320 174 aa5.75□□□□□ -1.49
HERC4-202ENST00000373700 DAD1P61803 113 aa5.75□□□□□ -1.49
HERC4-202ENST00000373700 LINC00467Q9BRT7 94 aa5.75□□□□□ -1.49
HERC4-202ENST00000373700 NIPBLQ6KC79 2804 aaeCLIP5.74□□□□□ -1.495e-6■■■■■ 32.2
HERC4-202ENST00000373700 TRBV20-1A0A075B6N2 111 aa5.74□□□□□ -1.49
HERC4-202ENST00000373700 PRB2P02812 416 aaPredicted RBP5.74□□□□□ -1.49
HERC4-202ENST00000373700 ANGP03950 147 aaKnown RBP5.74□□□□□ -1.49
HERC4-202ENST00000373700 TMEM89A2RUT3 159 aa5.74□□□□□ -1.49
HERC4-202ENST00000373700 TMEM86BQ8N661 226 aa5.74□□□□□ -1.49
HERC4-202ENST00000373700 CDKN2A-AS1Q9UH64 79 aa5.74□□□□□ -1.49
HERC4-202ENST00000373700 GYPEP15421 78 aa5.74□□□□□ -1.49
HERC4-202ENST00000373700 C10orf126Q8N4M7 172 aa5.74□□□□□ -1.49
HERC4-202ENST00000373700 SPANXA1Q9NS26 97 aa5.74□□□□□ -1.49
HERC4-202ENST00000373700 IGLV4-3A0A075B6K6 122 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 POLR2KP53803 58 aaKnown RBP5.73□□□□□ -1.49
HERC4-202ENST00000373700 HERVK_113P63121 156 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 RBMY1BA6NDE4 496 aaKnown RBP5.73□□□□□ -1.49
HERC4-202ENST00000373700 RBMY1EA6NEQ0 496 aaKnown RBP5.73□□□□□ -1.49
HERC4-202ENST00000373700 K7EQD1 137 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 RBMY1DP0C7P1 496 aaKnown RBP5.73□□□□□ -1.49
HERC4-202ENST00000373700 RBMY1A1P0DJD3 496 aaKnown RBP5.73□□□□□ -1.49
HERC4-202ENST00000373700 RBMY1CP0DJD4 496 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 SCGB1A1P11684 91 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 GAGE2BQ13066 116 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 SS18Q15532 418 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 GAGE2EQ4V326 116 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 GAGE2DQ9UEU5 116 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 BAHCC1Q9P281 2608 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 LGALS9O00182 355 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 S100A7L2Q5SY68 101 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 PPDPFLQ8WWR9 84 aa5.73□□□□□ -1.49
HERC4-202ENST00000373700 ZNF22P17026 224 aaPredicted RBP5.72□□□□□ -1.49
HERC4-202ENST00000373700 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.72□□□□□ -1.49
HERC4-202ENST00000373700 ANAPC13Q9BS18 74 aa5.72□□□□□ -1.49
HERC4-202ENST00000373700 TM2D2Q9BX73 214 aa5.72□□□□□ -1.49
HERC4-202ENST00000373700 IGHV4-4A0A075B6R2 117 aa5.72□□□□□ -1.49
HERC4-202ENST00000373700 TRBV27A0A0K0K1C4 114 aa5.72□□□□□ -1.49
HERC4-202ENST00000373700 SOCS3O14543 225 aa5.72□□□□□ -1.49
HERC4-202ENST00000373700 RS1O15537 224 aa5.72□□□□□ -1.49
HERC4-202ENST00000373700 CFAP126Q5VTH2 177 aa5.72□□□□□ -1.49
HERC4-202ENST00000373700 NDUFA11Q86Y39 141 aa5.72□□□□□ -1.49
HERC4-202ENST00000373700 CARD19Q96LW7 228 aa5.72□□□□□ -1.49
HERC4-202ENST00000373700 HILS1P60008 231 aa5.72□□□□□ -1.49
HERC4-202ENST00000373700 CLEC2BQ92478 149 aa5.72□□□□□ -1.49
HERC4-202ENST00000373700 ZNF580Q9UK33 172 aa5.72□□□□□ -1.49
HERC4-202ENST00000373700 TSHBP01222 138 aa5.71□□□□□ -1.49
HERC4-202ENST00000373700 FAM110AQ9BQ89 295 aa5.71□□□□□ -1.49
HERC4-202ENST00000373700 NDUFA7O95182 113 aa5.71□□□□□ -1.5
HERC4-202ENST00000373700 OXLD1Q5BKU9 147 aa5.71□□□□□ -1.5
HERC4-202ENST00000373700 COX8CQ7Z4L0 72 aa5.71□□□□□ -1.5
HERC4-202ENST00000373700 VSIG2Q96IQ7 327 aa5.71□□□□□ -1.5
HERC4-202ENST00000373700 IGLV2-18A0A075B6J9 118 aa5.71□□□□□ -1.5
HERC4-202ENST00000373700 A0A0J9YXY3 114 aa5.71□□□□□ -1.5
HERC4-202ENST00000373700 LOC100131303A0A0U1RQF7 123 aa5.71□□□□□ -1.5
HERC4-202ENST00000373700 ODF3L2Q3SX64 289 aa5.71□□□□□ -1.5
HERC4-202ENST00000373700 TCL1BO95988 128 aa5.7□□□□□ -1.5
HERC4-202ENST00000373700 RBX1P62877 108 aa5.7□□□□□ -1.5
HERC4-202ENST00000373700 GAGE2AQ6NT46 116 aa5.7□□□□□ -1.5
HERC4-202ENST00000373700 NFE4Q86UQ8 179 aa5.7□□□□□ -1.5
HERC4-202ENST00000373700 SLC25A29Q8N8R3 303 aa5.7□□□□□ -1.5
HERC4-202ENST00000373700 UBE2WQ96B02 151 aa5.7□□□□□ -1.5
HERC4-202ENST00000373700 IGHV1-58A0A0C4DH39 117 aa5.7□□□□□ -1.5
HERC4-202ENST00000373700 C9orf66Q5T8R8 295 aa5.7□□□□□ -1.5
HERC4-202ENST00000373700 ZFAND6Q6FIF0 208 aa5.7□□□□□ -1.5
HERC4-202ENST00000373700 C9orf85Q96MD7 179 aa5.7□□□□□ -1.5
HERC4-202ENST00000373700 ATP6V0E2Q8NHE4 81 aa5.7□□□□□ -1.5
HERC4-202ENST00000373700 TMEM263Q8WUH6 116 aaKnown RBP5.7□□□□□ -1.5
HERC4-202ENST00000373700 IGIPA6NJ69 53 aa5.69□□□□□ -1.5
HERC4-202ENST00000373700 CRIP2P52943 208 aaPredicted RBP5.69□□□□□ -1.5
HERC4-202ENST00000373700 C16orf74Q96GX8 76 aa5.69□□□□□ -1.5
HERC4-202ENST00000373700 ODF3Q96PU9 254 aa5.69□□□□□ -1.5
HERC4-202ENST00000373700 Q9UF83 564 aa5.69□□□□□ -1.5
HERC4-202ENST00000373700 MXRA5Q9NR99 2828 aa5.69□□□□□ -1.5
HERC4-202ENST00000373700 ANKRD29Q8N6D5 301 aa5.69□□□□□ -1.5
HERC4-202ENST00000373700 DNAJC30Q96LL9 226 aa5.69□□□□□ -1.5
HERC4-202ENST00000373700 PRSS47A8MTI9 375 aa5.69□□□□□ -1.5
HERC4-202ENST00000373700 G3V4G9 280 aa5.69□□□□□ -1.5
HERC4-202ENST00000373700 INSL3P51460 131 aa5.69□□□□□ -1.5
HERC4-202ENST00000373700 DAZ2Q13117 558 aaKnown RBP5.69□□□□□ -1.5
HERC4-202ENST00000373700 DAZ4Q86SG3 579 aaKnown RBP5.69□□□□□ -1.5
HERC4-202ENST00000373700 RNF152Q8N8N0 203 aa5.69□□□□□ -1.5
HERC4-202ENST00000373700 DPH3Q96FX2 82 aa5.69□□□□□ -1.5
HERC4-202ENST00000373700 DAZ3Q9NR90 486 aaKnown RBP5.69□□□□□ -1.5
HERC4-202ENST00000373700 TMEM223A0PJW6 202 aa5.68□□□□□ -1.5
HERC4-202ENST00000373700 APOC4P55056 127 aa5.68□□□□□ -1.5
HERC4-202ENST00000373700 TSPEAR-AS2P59090 65 aa5.68□□□□□ -1.5
HERC4-202ENST00000373700 Q6ZSN1 163 aa5.68□□□□□ -1.5
HERC4-202ENST00000373700 ZMAT4Q9H898 229 aa5.68□□□□□ -1.5
HERC4-202ENST00000373700 ICOSQ9Y6W8 199 aa5.68□□□□□ -1.5
HERC4-202ENST00000373700 LINC01620Q4KN68 170 aa5.68□□□□□ -1.5
HERC4-202ENST00000373700 TRAV25A0A0B4J276 109 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 TRBV6-5A0A0K0K1A5 114 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 FOXI1Q12951 378 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 SND1-IT1Q9HBX3 110 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 SPENQ96T58 3664 aaKnown RBP5.67□□□□□ -1.5
HERC4-202ENST00000373700 TRAV4A0A0B4J268 109 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 TINCRA0A1B0GVN0 87 aa5.67□□□□□ -1.5
HERC4-202ENST00000373700 PIK3CD-AS1Q5SR53 167 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms