RNA–Protein interactions for RNA: ENST00000373573.7

HDAC8-207, Transcript of histone deacetylase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC8, Length 2,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-207ENST00000373573 UBE2E2Q96LR5 201 aa9.55□□□□□ -0.88
HDAC8-207ENST00000373573 NACAE9PAV3 2078 aa9.54□□□□□ -0.88
HDAC8-207ENST00000373573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.54□□□□□ -0.889e-10■■■■■ 36.7
HDAC8-207ENST00000373573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.54□□□□□ -0.88
HDAC8-207ENST00000373573 IGKV2-29A2NJV5 120 aaPredicted RBP9.54□□□□□ -0.88
HDAC8-207ENST00000373573 GAGE2BQ13066 116 aa9.54□□□□□ -0.88
HDAC8-207ENST00000373573 GAGE2EQ4V326 116 aa9.54□□□□□ -0.88
HDAC8-207ENST00000373573 GAGE2DQ9UEU5 116 aa9.54□□□□□ -0.88
HDAC8-207ENST00000373573 PDZD2O15018 2839 aa9.54□□□□□ -0.88
HDAC8-207ENST00000373573 TRAV4A0A0B4J268 109 aa9.53□□□□□ -0.88
HDAC8-207ENST00000373573 IFITM1P13164 125 aa9.53□□□□□ -0.88
HDAC8-207ENST00000373573 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
HDAC8-207ENST00000373573 LINC00467Q9BRT7 94 aa9.53□□□□□ -0.88
HDAC8-207ENST00000373573 F8WDY8 70 aa9.53□□□□□ -0.88
HDAC8-207ENST00000373573 CRLF1O75462 422 aa9.53□□□□□ -0.88
HDAC8-207ENST00000373573 PRM2P04554 102 aa9.53□□□□□ -0.88
HDAC8-207ENST00000373573 NPC2P61916 151 aa9.53□□□□□ -0.88
HDAC8-207ENST00000373573 Q96MF0 132 aa9.53□□□□□ -0.88
HDAC8-207ENST00000373573 VPREB3Q9UKI3 123 aa9.53□□□□□ -0.88
HDAC8-207ENST00000373573 SORL1Q92673 2214 aa9.53□□□□□ -0.88
HDAC8-207ENST00000373573 ITPR2Q14571 2701 aa9.52□□□□□ -0.89
HDAC8-207ENST00000373573 TEX15Q9BXT5 2789 aa9.52□□□□□ -0.89
HDAC8-207ENST00000373573 LST1O00453 97 aa9.52□□□□□ -0.89
HDAC8-207ENST00000373573 IGHV3-53P01767 116 aa9.52□□□□□ -0.89
HDAC8-207ENST00000373573 Q6Q795 121 aa9.52□□□□□ -0.89
HDAC8-207ENST00000373573 Q6ZSV7 163 aa9.52□□□□□ -0.89
HDAC8-207ENST00000373573 ZNF702PQ9H963 129 aa9.52□□□□□ -0.89
HDAC8-207ENST00000373573 CSPG4Q6UVK1 2322 aa9.52□□□□□ -0.89
HDAC8-207ENST00000373573 IGLV5-45A0A087WSX0 123 aa9.51□□□□□ -0.89
HDAC8-207ENST00000373573 NDUFA1O15239 70 aa9.51□□□□□ -0.89
HDAC8-207ENST00000373573 NHLRC4P0CG21 123 aaPredicted RBP9.51□□□□□ -0.89
HDAC8-207ENST00000373573 TIRAPP58753 221 aa9.51□□□□□ -0.89
HDAC8-207ENST00000373573 Q6YL49 198 aa9.51□□□□□ -0.89
HDAC8-207ENST00000373573 C11orf72Q8NBR9 251 aa9.51□□□□□ -0.89
HDAC8-207ENST00000373573 MAPK1IP1LQ8NDC0 245 aa9.51□□□□□ -0.89
HDAC8-207ENST00000373573 CLEC2BQ92478 149 aa9.51□□□□□ -0.89
HDAC8-207ENST00000373573 CDKN2A-AS1Q9UH64 79 aa9.51□□□□□ -0.89
HDAC8-207ENST00000373573 SLURP1P55000 103 aa9.5□□□□□ -0.89
HDAC8-207ENST00000373573 NDUFV3P56181 108 aaKnown RBP9.5□□□□□ -0.89
HDAC8-207ENST00000373573 BEAN1Q3B7T3 259 aa9.5□□□□□ -0.89
HDAC8-207ENST00000373573 IGHV3-38A0A0C4DH36 116 aa9.49□□□□□ -0.89
HDAC8-207ENST00000373573 GAGE5Q13069 117 aa9.49□□□□□ -0.89
HDAC8-207ENST00000373573 GAGE6Q13070 117 aa9.49□□□□□ -0.89
HDAC8-207ENST00000373573 DEFB121Q5J5C9 76 aa9.49□□□□□ -0.89
HDAC8-207ENST00000373573 C15orf53Q8NAA6 179 aa9.49□□□□□ -0.89
HDAC8-207ENST00000373573 TMEM101Q96IK0 257 aa9.49□□□□□ -0.89
HDAC8-207ENST00000373573 RS1O15537 224 aa9.49□□□□□ -0.89
HDAC8-207ENST00000373573 FSHBP01225 129 aa9.49□□□□□ -0.89
HDAC8-207ENST00000373573 MRPL23Q16540 153 aaKnown RBP9.49□□□□□ -0.89
HDAC8-207ENST00000373573 CREBBPQ92793 2442 aa9.49□□□□□ -0.89
HDAC8-207ENST00000373573 IGHV4-31P0DP07 118 aa9.48□□□□□ -0.89
HDAC8-207ENST00000373573 WFDC11Q8NEX6 87 aa9.48□□□□□ -0.89
HDAC8-207ENST00000373573 LINC01587Q99440 93 aa9.48□□□□□ -0.89
HDAC8-207ENST00000373573 ITPR3Q14573 2671 aa9.48□□□□□ -0.89
HDAC8-207ENST00000373573 FAM240AA0A1B0GVK7 77 aa9.48□□□□□ -0.89
HDAC8-207ENST00000373573 CIRBPQ14011 172 aaKnown RBP9.48□□□□□ -0.89
HDAC8-207ENST00000373573 DEFB136Q30KP8 78 aa9.48□□□□□ -0.89
HDAC8-207ENST00000373573 C18orf65Q6ZTR6 163 aa9.48□□□□□ -0.89
HDAC8-207ENST00000373573 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.48□□□□□ -0.89
HDAC8-207ENST00000373573 DAND5Q8N907 189 aa9.48□□□□□ -0.89
HDAC8-207ENST00000373573 CCDC168Q8NDH2 2452 aa9.47□□□□□ -0.89
HDAC8-207ENST00000373573 ZANQ9Y493 2812 aa9.47□□□□□ -0.89
HDAC8-207ENST00000373573 IGLV5-39A0A0G2JS06 123 aa9.47□□□□□ -0.89
HDAC8-207ENST00000373573 TTC32Q5I0X7 151 aa9.47□□□□□ -0.89
HDAC8-207ENST00000373573 MAP6D1Q9H9H5 199 aa9.47□□□□□ -0.89
HDAC8-207ENST00000373573 TRAV25A0A0B4J276 109 aa9.46□□□□□ -0.89
HDAC8-207ENST00000373573 DGAT2L7PQ6IED9 249 aa9.46□□□□□ -0.89
HDAC8-207ENST00000373573 IGHV3OR16-12A0A075B7B8 117 aa9.46□□□□□ -0.9
HDAC8-207ENST00000373573 INSP01308 110 aa9.46□□□□□ -0.9
HDAC8-207ENST00000373573 HERVK_113P63121 156 aa9.46□□□□□ -0.9
HDAC8-207ENST00000373573 COX6A2Q02221 97 aa9.46□□□□□ -0.9
HDAC8-207ENST00000373573 LINC00308Q8TCZ7 52 aa9.46□□□□□ -0.9
HDAC8-207ENST00000373573 PEMTQ9UBM1 199 aa9.46□□□□□ -0.9
HDAC8-207ENST00000373573 MYO9AB2RTY4 2548 aa9.45□□□□□ -0.9
HDAC8-207ENST00000373573 NOTCH2Q04721 2471 aa9.45□□□□□ -0.9
HDAC8-207ENST00000373573 FAM19A3Q7Z5A8 133 aa9.45□□□□□ -0.9
HDAC8-207ENST00000373573 LINC00242Q5T6M2 205 aa9.44□□□□□ -0.9
HDAC8-207ENST00000373573 Q9H8V8 135 aa9.44□□□□□ -0.9
HDAC8-207ENST00000373573 AKAP9Q99996 3911 aa9.44□□□□□ -0.9
HDAC8-207ENST00000373573 GAGE12JA6NER3 117 aa9.43□□□□□ -0.9
HDAC8-207ENST00000373573 B5MCH6 92 aa9.43□□□□□ -0.9
HDAC8-207ENST00000373573 GAGE7O76087 117 aa9.43□□□□□ -0.9
HDAC8-207ENST00000373573 GAGE12FP0CL80 117 aa9.43□□□□□ -0.9
HDAC8-207ENST00000373573 GAGE12GP0CL81 117 aa9.43□□□□□ -0.9
HDAC8-207ENST00000373573 GAGE12IP0CL82 117 aa9.43□□□□□ -0.9
HDAC8-207ENST00000373573 GAGE4Q13068 117 aa9.43□□□□□ -0.9
HDAC8-207ENST00000373573 FLNAP21333 2647 aaKnown RBP9.43□□□□□ -0.9
HDAC8-207ENST00000373573 COX7A2LO14548 114 aa9.43□□□□□ -0.9
HDAC8-207ENST00000373573 COPS9Q8WXC6 57 aa9.43□□□□□ -0.9
HDAC8-207ENST00000373573 SS18L2Q9UHA2 77 aa9.43□□□□□ -0.9
HDAC8-207ENST00000373573 ZNF469Q96JG9 3925 aaPredicted RBP9.42□□□□□ -0.9
HDAC8-207ENST00000373573 SMIM1B2RUZ4 78 aa9.42□□□□□ -0.9
HDAC8-207ENST00000373573 Q8N2B8 174 aa9.42□□□□□ -0.9
HDAC8-207ENST00000373573 DYNLRB2Q8TF09 96 aa9.42□□□□□ -0.9
HDAC8-207ENST00000373573 FAM110AQ9BQ89 295 aa9.42□□□□□ -0.9
HDAC8-207ENST00000373573 CCDC179H3BU77 68 aa9.41□□□□□ -0.9
HDAC8-207ENST00000373573 LINC00694P0DN24 101 aa9.41□□□□□ -0.9
HDAC8-207ENST00000373573 DEFB114Q30KQ6 69 aa9.41□□□□□ -0.9
HDAC8-207ENST00000373573 C4orf3Q8WVX3 66 aa9.41□□□□□ -0.9
HDAC8-207ENST00000373573 CSDC2Q9Y534 153 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms