RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 CLUHP3Q96NS8 147 aa17.06■□□□□ 0.32
CDK9-201ENST00000373264 SPANXA1Q9NS26 97 aa17.06■□□□□ 0.32
CDK9-201ENST00000373264 FN1P02751 2386 aaKnown RBP17.05■□□□□ 0.32
CDK9-201ENST00000373264 RNASE1P07998 156 aaKnown RBP17.05■□□□□ 0.32
CDK9-201ENST00000373264 NPC2P61916 151 aa17.05■□□□□ 0.32
CDK9-201ENST00000373264 LITAFQ99732 161 aa17.05■□□□□ 0.32
CDK9-201ENST00000373264 COX6A2Q02221 97 aa17.04■□□□□ 0.32
CDK9-201ENST00000373264 ZNF418Q8TF45 676 aaPredicted RBP17.04■□□□□ 0.32
CDK9-201ENST00000373264 DNAJC30Q96LL9 226 aa17.04■□□□□ 0.32
CDK9-201ENST00000373264 CDKN2A-AS1Q9UH64 79 aa17.04■□□□□ 0.32
CDK9-201ENST00000373264 GCN1Q92616 2671 aaKnown RBP17.04■□□□□ 0.32
CDK9-201ENST00000373264 TCL1BO95988 128 aa17.04■□□□□ 0.32
CDK9-201ENST00000373264 IGHV1-58A0A0C4DH39 117 aa17.03■□□□□ 0.32
CDK9-201ENST00000373264 NTM-AS1Q6ZSK4 140 aa17.03■□□□□ 0.32
CDK9-201ENST00000373264 PRO1854Q9UHT4 67 aa17.03■□□□□ 0.32
CDK9-201ENST00000373264 NBEAL2Q6ZNJ1 2754 aa17.03■□□□□ 0.32
CDK9-201ENST00000373264 KMT2BQ9UMN6 2715 aaPredicted RBP17.03■□□□□ 0.32
CDK9-201ENST00000373264 TINCRA0A1B0GVN0 87 aa17.03■□□□□ 0.32
CDK9-201ENST00000373264 TEX29Q8N6K0 151 aa17.03■□□□□ 0.32
CDK9-201ENST00000373264 HIVEP2P31629 2446 aa17.02■□□□□ 0.32
CDK9-201ENST00000373264 VSIG2Q96IQ7 327 aa17.02■□□□□ 0.32
CDK9-201ENST00000373264 GAGE12JA6NER3 117 aa17.02■□□□□ 0.31
CDK9-201ENST00000373264 GAGE4Q13068 117 aa17.02■□□□□ 0.31
CDK9-201ENST00000373264 GAGE5Q13069 117 aa17.02■□□□□ 0.31
CDK9-201ENST00000373264 C19orf73Q9NVV2 129 aa17.02■□□□□ 0.31
CDK9-201ENST00000373264 NDUFA12Q9UI09 145 aa17.02■□□□□ 0.31
CDK9-201ENST00000373264 TMEM263Q8WUH6 116 aaKnown RBP17.01■□□□□ 0.31
CDK9-201ENST00000373264 LOC100131303A0A0U1RQF7 123 aa17.01■□□□□ 0.31
CDK9-201ENST00000373264 PLAC8L1A1L4L8 177 aa17.01■□□□□ 0.31
CDK9-201ENST00000373264 PRSS2P07478 247 aa17■□□□□ 0.31
CDK9-201ENST00000373264 CRYBA4P53673 196 aa17■□□□□ 0.31
CDK9-201ENST00000373264 DGAT2L7PQ6IED9 249 aa16.99■□□□□ 0.31
CDK9-201ENST00000373264 C16orf95Q9H693 158 aa16.99■□□□□ 0.31
CDK9-201ENST00000373264 GEMIN7Q9H840 131 aaKnown RBP16.99■□□□□ 0.31
CDK9-201ENST00000373264 K7EQD1 137 aa16.99■□□□□ 0.31
CDK9-201ENST00000373264 GAGE7O76087 117 aa16.99■□□□□ 0.31
CDK9-201ENST00000373264 GAGE12FP0CL80 117 aa16.99■□□□□ 0.31
CDK9-201ENST00000373264 GAGE12GP0CL81 117 aa16.99■□□□□ 0.31
CDK9-201ENST00000373264 GAGE12IP0CL82 117 aa16.99■□□□□ 0.31
CDK9-201ENST00000373264 DAND5Q8N907 189 aa16.99■□□□□ 0.31
CDK9-201ENST00000373264 IGLV1-51P01701 117 aa16.98■□□□□ 0.31
CDK9-201ENST00000373264 TMEM238C9JI98 176 aa16.98■□□□□ 0.31
CDK9-201ENST00000373264 OTOGQ6ZRI0 2925 aa16.98■□□□□ 0.31
CDK9-201ENST00000373264 IGHV3-33P01772 117 aa16.97■□□□□ 0.31
CDK9-201ENST00000373264 KRTAP10-3P60369 221 aa16.97■□□□□ 0.31
CDK9-201ENST00000373264 SCGB1C2P0DMR2 95 aa16.96■□□□□ 0.31
CDK9-201ENST00000373264 TRAV13-1A0A0B4J241 112 aa16.95■□□□□ 0.3
CDK9-201ENST00000373264 J3QKU1 62 aa16.95■□□□□ 0.3
CDK9-201ENST00000373264 RPL36AP83881 106 aaKnown RBP16.95■□□□□ 0.3
CDK9-201ENST00000373264 RPL36ALQ969Q0 106 aaKnown RBP16.95■□□□□ 0.3
CDK9-201ENST00000373264 TMEM101Q96IK0 257 aa16.95■□□□□ 0.3
CDK9-201ENST00000373264 LINC00242Q5T6M2 205 aa16.94■□□□□ 0.3
CDK9-201ENST00000373264 TRAV4A0A0B4J268 109 aa16.94■□□□□ 0.3
CDK9-201ENST00000373264 CSNK1G2-AS1Q8NCQ2 148 aa16.93■□□□□ 0.3
CDK9-201ENST00000373264 TRGV2A0A075B6R0 118 aa16.93■□□□□ 0.3
CDK9-201ENST00000373264 HILS1P60008 231 aa16.93■□□□□ 0.3
CDK9-201ENST00000373264 ZNF625Q96I27 306 aaPredicted RBP16.93■□□□□ 0.3
CDK9-201ENST00000373264 ERG28Q9UKR5 140 aa16.91■□□□□ 0.3
CDK9-201ENST00000373264 TENM1Q9UKZ4 2725 aa16.91■□□□□ 0.3
CDK9-201ENST00000373264 A0A0U1RRA0 63 aa16.91■□□□□ 0.3
CDK9-201ENST00000373264 ZFAND6Q6FIF0 208 aa16.91■□□□□ 0.3
CDK9-201ENST00000373264 SPATA3Q8NHX4 192 aa16.91■□□□□ 0.3
CDK9-201ENST00000373264 A0A0B4J2C4 111 aa16.9■□□□□ 0.3
CDK9-201ENST00000373264 Q1RN00 199 aa16.9■□□□□ 0.3
CDK9-201ENST00000373264 DAZ2Q13117 558 aaKnown RBP16.9■□□□□ 0.3
CDK9-201ENST00000373264 GTSF1LQ9H1H1 148 aa16.9■□□□□ 0.3
CDK9-201ENST00000373264 SBSPONQ8IVN8 264 aa16.89■□□□□ 0.29
CDK9-201ENST00000373264 IGLV5-45A0A087WSX0 123 aa16.89■□□□□ 0.29
CDK9-201ENST00000373264 TRBV10-1A0A0K0K1A3 114 aa16.88■□□□□ 0.29
CDK9-201ENST00000373264 TIRAPP58753 221 aa16.88■□□□□ 0.29
CDK9-201ENST00000373264 C16orf74Q96GX8 76 aa16.88■□□□□ 0.29
CDK9-201ENST00000373264 MIAQ16674 131 aa16.87■□□□□ 0.29
CDK9-201ENST00000373264 DAZ4Q86SG3 579 aaKnown RBP16.87■□□□□ 0.29
CDK9-201ENST00000373264 C1QTNF4Q9BXJ3 329 aa16.87■□□□□ 0.29
CDK9-201ENST00000373264 DAZ3Q9NR90 486 aaKnown RBP16.87■□□□□ 0.29
CDK9-201ENST00000373264 FOXI1Q12951 378 aa16.86■□□□□ 0.29
CDK9-201ENST00000373264 GAGE12HA6NDE8 117 aa16.86■□□□□ 0.29
CDK9-201ENST00000373264 CARD19Q96LW7 228 aa16.86■□□□□ 0.29
CDK9-201ENST00000373264 SPANXDQ9BXN6 97 aa16.86■□□□□ 0.29
CDK9-201ENST00000373264 CDC42SE2Q9NRR3 84 aa16.86■□□□□ 0.29
CDK9-201ENST00000373264 SPANXCQ9NY87 97 aa16.86■□□□□ 0.29
CDK9-201ENST00000373264 Q9H8V8 135 aa16.85■□□□□ 0.29
CDK9-201ENST00000373264 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.85■□□□□ 0.29
CDK9-201ENST00000373264 TRIAP1O43715 76 aa16.85■□□□□ 0.29
CDK9-201ENST00000373264 SMIM1B2RUZ4 78 aa16.84■□□□□ 0.29
CDK9-201ENST00000373264 LYRM7Q5U5X0 104 aa16.84■□□□□ 0.29
CDK9-201ENST00000373264 TRBV20-1A0A075B6N2 111 aa16.84■□□□□ 0.29
CDK9-201ENST00000373264 TRGV4A0A0C4DH28 118 aa16.82■□□□□ 0.28
CDK9-201ENST00000373264 IGKV3OR2-268A0A0C4DH90 116 aa16.82■□□□□ 0.28
CDK9-201ENST00000373264 C9JAW5 83 aa16.82■□□□□ 0.28
CDK9-201ENST00000373264 HERVK_113P63121 156 aa16.82■□□□□ 0.28
CDK9-201ENST00000373264 IGLV5-39A0A0G2JS06 123 aa16.82■□□□□ 0.28
CDK9-201ENST00000373264 NDUFA1O15239 70 aa16.82■□□□□ 0.28
CDK9-201ENST00000373264 J3QR89 54 aa16.81■□□□□ 0.28
CDK9-201ENST00000373264 DEFB130BP0DP73 79 aa16.8■□□□□ 0.28
CDK9-201ENST00000373264 DEFB130AP0DP74 79 aa16.8■□□□□ 0.28
CDK9-201ENST00000373264 GAGE6Q13070 117 aa16.8■□□□□ 0.28
CDK9-201ENST00000373264 ANKRD29Q8N6D5 301 aa16.8■□□□□ 0.28
CDK9-201ENST00000373264 LY6G6DO95868 133 aa16.8■□□□□ 0.28
CDK9-201ENST00000373264 CMC4P56277 68 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms