RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 E7EQL1 145 aa7.81□□□□□ -1.16
TRERF1-203ENST00000372917 LY6G5BQ8NDX9 201 aa7.81□□□□□ -1.16
TRERF1-203ENST00000372917 IGHV1-58A0A0C4DH39 117 aa7.81□□□□□ -1.16
TRERF1-203ENST00000372917 IGHV3-11P01762 117 aa7.81□□□□□ -1.16
TRERF1-203ENST00000372917 LY6EQ16553 131 aa7.81□□□□□ -1.16
TRERF1-203ENST00000372917 C15orf32Q32M92 178 aa7.81□□□□□ -1.16
TRERF1-203ENST00000372917 C11orf45Q8TAV5 145 aa7.81□□□□□ -1.16
TRERF1-203ENST00000372917 TEX22C9J3V5 150 aa7.81□□□□□ -1.16
TRERF1-203ENST00000372917 CD28P10747 220 aa7.81□□□□□ -1.16
TRERF1-203ENST00000372917 PIK3CD-AS1Q5SR53 167 aa7.81□□□□□ -1.16
TRERF1-203ENST00000372917 C9orf47Q6ZRZ4 202 aa7.81□□□□□ -1.16
TRERF1-203ENST00000372917 ADORA2A-AS1P86434 159 aa7.8□□□□□ -1.16
TRERF1-203ENST00000372917 CFHR3Q02985 330 aa7.8□□□□□ -1.16
TRERF1-203ENST00000372917 LRCOL1A6NCL2 159 aa7.8□□□□□ -1.16
TRERF1-203ENST00000372917 KLKP1Q107X0 134 aa7.8□□□□□ -1.16
TRERF1-203ENST00000372917 RNF5Q99942 180 aa7.8□□□□□ -1.16
TRERF1-203ENST00000372917 SPTBN5Q9NRC6 3674 aaKnown RBP7.8□□□□□ -1.16
TRERF1-203ENST00000372917 MRGPRG-AS1Q2M3A8 158 aa7.8□□□□□ -1.16
TRERF1-203ENST00000372917 KHDC1LQ5JSQ8 128 aa7.8□□□□□ -1.16
TRERF1-203ENST00000372917 Q6ZRU5 148 aa7.8□□□□□ -1.16
TRERF1-203ENST00000372917 LINC00308Q8TCZ7 52 aa7.8□□□□□ -1.16
TRERF1-203ENST00000372917 CFAP47Q6ZTR5 3102 aa7.79□□□□□ -1.16
TRERF1-203ENST00000372917 SUMO4Q6EEV6 95 aa7.79□□□□□ -1.16
TRERF1-203ENST00000372917 GNRH2O43555 120 aa7.79□□□□□ -1.16
TRERF1-203ENST00000372917 IGHV1-69P01742 117 aa7.79□□□□□ -1.16
TRERF1-203ENST00000372917 POLR2KP53803 58 aaKnown RBP7.79□□□□□ -1.16
TRERF1-203ENST00000372917 C11orf68Q9H3H3 251 aaKnown RBP7.79□□□□□ -1.16
TRERF1-203ENST00000372917 IGF1P05019 195 aa7.78□□□□□ -1.16
TRERF1-203ENST00000372917 SLPIP03973 132 aa7.78□□□□□ -1.16
TRERF1-203ENST00000372917 RNASE4P34096 147 aaKnown RBP7.78□□□□□ -1.16
TRERF1-203ENST00000372917 LAMTOR3Q9UHA4 124 aa7.78□□□□□ -1.16
TRERF1-203ENST00000372917 MYO9AB2RTY4 2548 aa7.78□□□□□ -1.16
TRERF1-203ENST00000372917 TRAV13-2A0A0B4J235 113 aa7.78□□□□□ -1.16
TRERF1-203ENST00000372917 C6orf223Q8N319 242 aa7.78□□□□□ -1.16
TRERF1-203ENST00000372917 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
TRERF1-203ENST00000372917 UBL5Q9BZL1 73 aa7.77□□□□□ -1.17
TRERF1-203ENST00000372917 IGLV4-3A0A075B6K6 122 aa7.77□□□□□ -1.17
TRERF1-203ENST00000372917 IGHV1OR15-1A0A075B7D0 117 aa7.77□□□□□ -1.17
TRERF1-203ENST00000372917 PRR9Q5T870 116 aa7.77□□□□□ -1.17
TRERF1-203ENST00000372917 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.77□□□□□ -1.17
TRERF1-203ENST00000372917 ZFAND3Q9H8U3 227 aa7.77□□□□□ -1.17
TRERF1-203ENST00000372917 NCOR2Q9Y618 2525 aa7.77□□□□□ -1.17
TRERF1-203ENST00000372917 RNASE1P07998 156 aaKnown RBP7.77□□□□□ -1.17
TRERF1-203ENST00000372917 ATP5EP56381 51 aaPredicted RBP7.77□□□□□ -1.17
TRERF1-203ENST00000372917 A0A087WYN8 130 aa7.76□□□□□ -1.17
TRERF1-203ENST00000372917 ESRGQ1W209 222 aa7.76□□□□□ -1.17
TRERF1-203ENST00000372917 VMO1Q7Z5L0 202 aa7.76□□□□□ -1.17
TRERF1-203ENST00000372917 TRAV10A0A0B4J240 114 aa7.76□□□□□ -1.17
TRERF1-203ENST00000372917 Q9UF83 564 aa7.76□□□□□ -1.17
TRERF1-203ENST00000372917 LECT2O14960 151 aa7.76□□□□□ -1.17
TRERF1-203ENST00000372917 MIFP14174 115 aa7.76□□□□□ -1.17
TRERF1-203ENST00000372917 ATP5EP2Q5VTU8 51 aa7.76□□□□□ -1.17
TRERF1-203ENST00000372917 G3V318 75 aa7.75□□□□□ -1.17
TRERF1-203ENST00000372917 PSPHP1O15172 72 aa7.75□□□□□ -1.17
TRERF1-203ENST00000372917 HAMPP81172 84 aa7.75□□□□□ -1.17
TRERF1-203ENST00000372917 KAAG1Q9UBP8 84 aa7.75□□□□□ -1.17
TRERF1-203ENST00000372917 NDUFC1O43677 76 aa7.75□□□□□ -1.17
TRERF1-203ENST00000372917 Q9H8V8 135 aa7.75□□□□□ -1.17
TRERF1-203ENST00000372917 SETD2Q9BYW2 2564 aaPredicted RBP7.75□□□□□ -1.17
TRERF1-203ENST00000372917 C1orf158Q8N1D5 194 aa7.75□□□□□ -1.17
TRERF1-203ENST00000372917 MIR7-3HGQ8N6C7 128 aa7.75□□□□□ -1.17
TRERF1-203ENST00000372917 PIEZO1Q92508 2521 aa7.75□□□□□ -1.17
TRERF1-203ENST00000372917 HIST2H2BCQ6DN03 193 aa7.74□□□□□ -1.17
TRERF1-203ENST00000372917 HIST2H2BDQ6DRA6 164 aa7.74□□□□□ -1.17
TRERF1-203ENST00000372917 CRPP02741 224 aa7.74□□□□□ -1.17
TRERF1-203ENST00000372917 IGLV1-47P01700 117 aa7.73□□□□□ -1.17
TRERF1-203ENST00000372917 PLA2G2CQ5R387 149 aa7.73□□□□□ -1.17
TRERF1-203ENST00000372917 DGAT2L7PQ6IED9 249 aa7.73□□□□□ -1.17
TRERF1-203ENST00000372917 C20orf203Q8NBC4 194 aa7.73□□□□□ -1.17
TRERF1-203ENST00000372917 MRPL53Q96EL3 112 aaKnown RBP7.73□□□□□ -1.17
TRERF1-203ENST00000372917 CLPSL1A2RUU4 121 aa7.73□□□□□ -1.17
TRERF1-203ENST00000372917 ANKRD11Q6UB99 2663 aaPredicted RBP7.73□□□□□ -1.17
TRERF1-203ENST00000372917 F6UB75 175 aa7.73□□□□□ -1.17
TRERF1-203ENST00000372917 H3BS24 57 aa7.72□□□□□ -1.17
TRERF1-203ENST00000372917 APOC4P55056 127 aa7.72□□□□□ -1.17
TRERF1-203ENST00000372917 OVOL2Q9BRP0 275 aa7.72□□□□□ -1.17
TRERF1-203ENST00000372917 GRNP28799 593 aaKnown RBP7.72□□□□□ -1.17
TRERF1-203ENST00000372917 RPL36AP83881 106 aaKnown RBP7.72□□□□□ -1.17
TRERF1-203ENST00000372917 RPL36ALQ969Q0 106 aaKnown RBP7.72□□□□□ -1.17
TRERF1-203ENST00000372917 DCHS1Q96JQ0 3298 aa7.72□□□□□ -1.17
TRERF1-203ENST00000372917 IGHV4OR15-8A0A075B7B6 117 aa7.71□□□□□ -1.17
TRERF1-203ENST00000372917 A0A087WW49 117 aa7.71□□□□□ -1.17
TRERF1-203ENST00000372917 DEFB1P60022 68 aa7.71□□□□□ -1.17
TRERF1-203ENST00000372917 UNQ9165/PRO28630Q6UXU0 137 aa7.71□□□□□ -1.17
TRERF1-203ENST00000372917 TLN2Q9Y4G6 2542 aa7.71□□□□□ -1.18
TRERF1-203ENST00000372917 ATP6V0E1O15342 81 aa7.71□□□□□ -1.18
TRERF1-203ENST00000372917 FUSP35637 526 aaKnown RBP eCLIP7.71□□□□□ -1.18
TRERF1-203ENST00000372917 BRD3OSQ6XYD6 125 aa7.71□□□□□ -1.18
TRERF1-203ENST00000372917 TM2D3Q9BRN9 247 aa7.7□□□□□ -1.18
TRERF1-203ENST00000372917 ORMDL1Q9P0S3 153 aa7.7□□□□□ -1.18
TRERF1-203ENST00000372917 USP9YO00507 2555 aaPredicted RBP7.7□□□□□ -1.18
TRERF1-203ENST00000372917 IGLV11-55A0A075B6I3 123 aa7.7□□□□□ -1.18
TRERF1-203ENST00000372917 UBE2E2Q96LR5 201 aa7.7□□□□□ -1.18
TRERF1-203ENST00000372917 KLK9Q9UKQ9 250 aa7.7□□□□□ -1.18
TRERF1-203ENST00000372917 RNASE3P12724 160 aaKnown RBP7.69□□□□□ -1.18
TRERF1-203ENST00000372917 LINC00315P59091 139 aa7.69□□□□□ -1.18
TRERF1-203ENST00000372917 CDKN2A-AS1Q9UH64 79 aa7.69□□□□□ -1.18
TRERF1-203ENST00000372917 NDUFA1O15239 70 aa7.68□□□□□ -1.18
TRERF1-203ENST00000372917 CTSGP08311 255 aa7.68□□□□□ -1.18
TRERF1-203ENST00000372917 SPTSSBQ8NFR3 76 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms