RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 CRYGDP07320 174 aa13.17□□□□□ -0.3
VEGFA-206ENST00000372077 TM2D2Q9BX73 214 aa13.17□□□□□ -0.3
VEGFA-206ENST00000372077 PLNP26678 52 aa13.17□□□□□ -0.3
VEGFA-206ENST00000372077 SPANXB1Q9NS25 103 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-206ENST00000372077 MGAM2Q2M2H8 2515 aa13.17□□□□□ -0.3
VEGFA-206ENST00000372077 E9PLD3 99 aa13.17□□□□□ -0.3
VEGFA-206ENST00000372077 LINC00315P59091 139 aa13.16□□□□□ -0.3
VEGFA-206ENST00000372077 TSPEAR-AS2P59090 65 aa13.16□□□□□ -0.3
VEGFA-206ENST00000372077 ZFP2Q6ZN57 461 aa13.16□□□□□ -0.3
VEGFA-206ENST00000372077 SMIM20Q8N5G0 67 aa13.16□□□□□ -0.3
VEGFA-206ENST00000372077 B5MCH6 92 aa13.15□□□□□ -0.3
VEGFA-206ENST00000372077 NOP10Q9NPE3 64 aaKnown RBP13.15□□□□□ -0.3
VEGFA-206ENST00000372077 DNHD1Q96M86 4753 aa13.14□□□□□ -0.31
VEGFA-206ENST00000372077 LINC01549A6NIU2 74 aa13.14□□□□□ -0.31
VEGFA-206ENST00000372077 MIFP14174 115 aa13.14□□□□□ -0.31
VEGFA-206ENST00000372077 POM121L12Q8N7R1 296 aa13.14□□□□□ -0.31
VEGFA-206ENST00000372077 NOTCH1P46531 2555 aa13.14□□□□□ -0.31
VEGFA-206ENST00000372077 GAGE5Q13069 117 aa13.14□□□□□ -0.31
VEGFA-206ENST00000372077 GAGE6Q13070 117 aa13.14□□□□□ -0.31
VEGFA-206ENST00000372077 ERG28Q9UKR5 140 aa13.14□□□□□ -0.31
VEGFA-206ENST00000372077 SPINK8P0C7L1 97 aa13.13□□□□□ -0.31
VEGFA-206ENST00000372077 Q8NAQ8 132 aa13.13□□□□□ -0.31
VEGFA-206ENST00000372077 A8MWV9 139 aa13.13□□□□□ -0.31
VEGFA-206ENST00000372077 TRGV1A0A0A0MS02 117 aa13.12□□□□□ -0.31
VEGFA-206ENST00000372077 Q6ZTI0 123 aa13.12□□□□□ -0.31
VEGFA-206ENST00000372077 ZNRF2Q8NHG8 242 aa13.12□□□□□ -0.31
VEGFA-206ENST00000372077 NBEAL1Q6ZS30 2694 aa13.12□□□□□ -0.31
VEGFA-206ENST00000372077 NBEAL2Q6ZNJ1 2754 aa13.12□□□□□ -0.31
VEGFA-206ENST00000372077 IGHV4-28A0A0C4DH34 117 aa13.12□□□□□ -0.31
VEGFA-206ENST00000372077 RS1O15537 224 aa13.12□□□□□ -0.31
VEGFA-206ENST00000372077 DEFB121Q5J5C9 76 aa13.12□□□□□ -0.31
VEGFA-206ENST00000372077 SBSPONQ8IVN8 264 aa13.12□□□□□ -0.31
VEGFA-206ENST00000372077 KIR2DL4Q99706 377 aa13.12□□□□□ -0.31
VEGFA-206ENST00000372077 TNFRSF18Q9Y5U5 241 aa13.12□□□□□ -0.31
VEGFA-206ENST00000372077 TRBV7-3A0A075B6L6 115 aa13.11□□□□□ -0.31
VEGFA-206ENST00000372077 NPC2P61916 151 aa13.11□□□□□ -0.31
VEGFA-206ENST00000372077 RPL32P62910 135 aaKnown RBP13.11□□□□□ -0.31
VEGFA-206ENST00000372077 CFAP126Q5VTH2 177 aa13.11□□□□□ -0.31
VEGFA-206ENST00000372077 C20orf78Q9BR46 151 aa13.11□□□□□ -0.31
VEGFA-206ENST00000372077 IGLV4-69A0A075B6H9 119 aa13.11□□□□□ -0.31
VEGFA-206ENST00000372077 GAGE13Q4V321 117 aa13.11□□□□□ -0.31
VEGFA-206ENST00000372077 RETNQ9HD89 108 aa13.11□□□□□ -0.31
VEGFA-206ENST00000372077 IGHV3-38A0A0C4DH36 116 aa13.1□□□□□ -0.31
VEGFA-206ENST00000372077 PSMB2P49721 201 aa13.1□□□□□ -0.31
VEGFA-206ENST00000372077 LINC00612Q8N6U2 182 aa13.1□□□□□ -0.31
VEGFA-206ENST00000372077 A0A1B0GWB2 263 aa13.1□□□□□ -0.31
VEGFA-206ENST00000372077 F8W1H4 67 aa13.09□□□□□ -0.31
VEGFA-206ENST00000372077 ANAPC13Q9BS18 74 aa13.09□□□□□ -0.31
VEGFA-206ENST00000372077 LYRM9A8MSI8 78 aa13.08□□□□□ -0.32
VEGFA-206ENST00000372077 GAGE7O76087 117 aa13.08□□□□□ -0.32
VEGFA-206ENST00000372077 MT-ATP8P03928 68 aa13.08□□□□□ -0.32
VEGFA-206ENST00000372077 GAGE12FP0CL80 117 aa13.08□□□□□ -0.32
VEGFA-206ENST00000372077 GAGE12GP0CL81 117 aa13.08□□□□□ -0.32
VEGFA-206ENST00000372077 GAGE12IP0CL82 117 aa13.08□□□□□ -0.32
VEGFA-206ENST00000372077 TM2D3Q9BRN9 247 aa13.08□□□□□ -0.32
VEGFA-206ENST00000372077 TRAV12-1A0A0B4J245 112 aa13.07□□□□□ -0.32
VEGFA-206ENST00000372077 TRAV4A0A0B4J268 109 aa13.07□□□□□ -0.32
VEGFA-206ENST00000372077 A0A0J9YXV3 536 aa13.07□□□□□ -0.32
VEGFA-206ENST00000372077 RHODO00212 210 aa13.07□□□□□ -0.32
VEGFA-206ENST00000372077 IGIPA6NJ69 53 aa13.06□□□□□ -0.32
VEGFA-206ENST00000372077 DEFB4AO15263 64 aa13.06□□□□□ -0.32
VEGFA-206ENST00000372077 POLR2KP53803 58 aaKnown RBP13.06□□□□□ -0.32
VEGFA-206ENST00000372077 PRO0461Q9UI25 63 aa13.06□□□□□ -0.32
VEGFA-206ENST00000372077 FAM222AQ5U5X8 452 aa13.06□□□□□ -0.32
VEGFA-206ENST00000372077 VCYO14598 125 aa13.05□□□□□ -0.32
VEGFA-206ENST00000372077 MRAPQ8TCY5 172 aa13.05□□□□□ -0.32
VEGFA-206ENST00000372077 PMVKQ15126 192 aa13.05□□□□□ -0.32
VEGFA-206ENST00000372077 EDA2RQ9HAV5 297 aa13.05□□□□□ -0.32
VEGFA-206ENST00000372077 TRGV2A0A075B6R0 118 aa13.04□□□□□ -0.32
VEGFA-206ENST00000372077 M0QY20 66 aa13.04□□□□□ -0.32
VEGFA-206ENST00000372077 SMCPP49901 116 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-206ENST00000372077 TRAV8-3A0A0A6YYJ7 113 aa13.03□□□□□ -0.32
VEGFA-206ENST00000372077 Q6ZSN1 163 aa13.03□□□□□ -0.32
VEGFA-206ENST00000372077 CDIP1Q9H305 208 aa13.03□□□□□ -0.32
VEGFA-206ENST00000372077 C11orf68Q9H3H3 251 aaKnown RBP13.03□□□□□ -0.32
VEGFA-206ENST00000372077 DEFB130BP0DP73 79 aa13.02□□□□□ -0.33
VEGFA-206ENST00000372077 DEFB130AP0DP74 79 aa13.02□□□□□ -0.33
VEGFA-206ENST00000372077 NFE4Q86UQ8 179 aa13.02□□□□□ -0.33
VEGFA-206ENST00000372077 CELA1Q9UNI1 258 aa13.02□□□□□ -0.33
VEGFA-206ENST00000372077 IGHV3-53P01767 116 aa13.02□□□□□ -0.33
VEGFA-206ENST00000372077 SPART-AS1P0CW21 52 aa13.02□□□□□ -0.33
VEGFA-206ENST00000372077 A0A0J9YY99 117 aa13.01□□□□□ -0.33
VEGFA-206ENST00000372077 A0A0U1RRA0 63 aa13.01□□□□□ -0.33
VEGFA-206ENST00000372077 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-206ENST00000372077 IGKV2-29A2NJV5 120 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-206ENST00000372077 PPP1R17O96001 155 aa13.01□□□□□ -0.33
VEGFA-206ENST00000372077 TAL2Q16559 108 aa13.01□□□□□ -0.33
VEGFA-206ENST00000372077 SCGB1C2P0DMR2 95 aa13□□□□□ -0.33
VEGFA-206ENST00000372077 LGALS3P17931 250 aaKnown RBP13□□□□□ -0.33
VEGFA-206ENST00000372077 XGP55808 180 aa13□□□□□ -0.33
VEGFA-206ENST00000372077 Q6ZUT4 128 aa13□□□□□ -0.33
VEGFA-206ENST00000372077 B9D2Q9BPU9 175 aa13□□□□□ -0.33
VEGFA-206ENST00000372077 J3QQQ9 107 aa12.99□□□□□ -0.33
VEGFA-206ENST00000372077 TRBV6-5A0A0K0K1A5 114 aa12.99□□□□□ -0.33
VEGFA-206ENST00000372077 PRSS2P07478 247 aa12.99□□□□□ -0.33
VEGFA-206ENST00000372077 FHL2Q14192 279 aa12.98□□□□□ -0.33
VEGFA-206ENST00000372077 DAND5Q8N907 189 aa12.98□□□□□ -0.33
VEGFA-206ENST00000372077 DAD1P61803 113 aa12.98□□□□□ -0.33
VEGFA-206ENST00000372077 HERVK_113P61574 105 aa12.98□□□□□ -0.33
VEGFA-206ENST00000372077 CFC1BP0CG36 223 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms